Chlorine in PDB 3pfe: Crystal Structure of A M20A Metallo Peptidase (Dape, LPG0809) From Legionella Pneumophila Subsp. Pneumophila Str. Philadelphia 1 at 1.50 A Resolution

The structure of Crystal Structure of A M20A Metallo Peptidase (Dape, LPG0809) From Legionella Pneumophila Subsp. Pneumophila Str. Philadelphia 1 at 1.50 A Resolution, PDB code: 3pfe was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	29.77 / 1.50
Space group	P 21 21 2
Cell size a, b, c (Å), α, β, γ (°)	59.388, 178.600, 50.803, 90.00, 90.00, 90.00
R / Rfree (%)	13.8 / 16.3

The structure of Crystal Structure of A M20A Metallo Peptidase (Dape, LPG0809) From Legionella Pneumophila Subsp. Pneumophila Str. Philadelphia 1 at 1.50 A Resolution also contains other interesting chemical elements:

Zinc

(Zn)

4 atoms

The binding sites of Chlorine atom in the Crystal Structure of A M20A Metallo Peptidase (Dape, LPG0809) From Legionella Pneumophila Subsp. Pneumophila Str. Philadelphia 1 at 1.50 A Resolution (pdb code 3pfe). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 8 binding sites of Chlorine where determined in the Crystal Structure of A M20A Metallo Peptidase (Dape, LPG0809) From Legionella Pneumophila Subsp. Pneumophila Str. Philadelphia 1 at 1.50 A Resolution, PDB code: 3pfe:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6; 7; 8;

Chlorine binding site 1 out of 8 in the Crystal Structure of A M20A Metallo Peptidase (Dape, LPG0809) From Legionella Pneumophila Subsp. Pneumophila Str. Philadelphia 1 at 1.50 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A M20A Metallo Peptidase (Dape, LPG0809) From Legionella Pneumophila Subsp. Pneumophila Str. Philadelphia 1 at 1.50 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl505 b:27.3 occ:1.00 ZN A:ZN504 2.2 19.4 0.6 O A:HOH941 2.9 35.0 1.0 N A:GLY411 3.1 15.1 1.0 CD A:ARG305 3.4 30.8 1.0 OE2 A:GLU410 3.4 17.7 1.0 OE1 A:GLU410 3.5 19.8 1.0 N1 A:IMD513 3.6 26.6 1.0 NE A:ARG305 3.6 32.3 1.0 CD A:GLU410 3.6 18.6 1.0 O A:HOH1002 3.7 20.1 1.0 CA A:GLY411 3.8 12.8 1.0 CZ A:ARG305 3.9 51.4 1.0 NH1 A:ARG305 4.0 46.6 1.0 CG A:ARG305 4.1 25.1 1.0 C A:GLU410 4.1 15.0 1.0 CA A:GLU410 4.2 15.4 1.0 C5 A:IMD513 4.3 35.8 1.0 C2 A:IMD513 4.5 32.0 1.0 N A:GLY412 4.7 12.7 1.0 NH2 A:ARG305 4.7 54.8 1.0 C A:GLY411 4.7 14.1 1.0 CG A:GLU410 4.8 17.7 1.0 O A:GLY409 4.8 14.6 1.0 CB A:GLU410 5.0 17.7 1.0 CE A:MSE408 5.0 18.1 0.5 O A:HOH1009 5.0 45.9 1.0

Chlorine binding site 2 out of 8 in the Crystal Structure of A M20A Metallo Peptidase (Dape, LPG0809) From Legionella Pneumophila Subsp. Pneumophila Str. Philadelphia 1 at 1.50 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A M20A Metallo Peptidase (Dape, LPG0809) From Legionella Pneumophila Subsp. Pneumophila Str. Philadelphia 1 at 1.50 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl506 b:19.0 occ:1.00 O A:HOH692 3.1 28.5 1.0 ND1 A:HIS442 3.1 17.0 1.0 CE1 A:HIS442 4.1 16.5 1.0 CG A:HIS442 4.1 14.3 1.0 CB A:HIS442 4.2 14.5 1.0 NH2 A:ARG340 4.3 17.8 1.0

Chlorine binding site 3 out of 8 in the Crystal Structure of A M20A Metallo Peptidase (Dape, LPG0809) From Legionella Pneumophila Subsp. Pneumophila Str. Philadelphia 1 at 1.50 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of A M20A Metallo Peptidase (Dape, LPG0809) From Legionella Pneumophila Subsp. Pneumophila Str. Philadelphia 1 at 1.50 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl507 b:20.7 occ:1.00 ZN A:ZN503 2.2 16.9 1.0 O A:HOH975 3.4 14.7 0.5 ND1 A:HIS52 3.5 11.6 1.0 CE1 A:HIS52 3.5 16.7 1.0 O A:HOH662 3.8 28.5 1.0 CL A:CL508 3.8 19.7 1.0 OD2 A:ASP25 4.3 22.0 1.0 O A:HOH975 4.4 21.9 0.5 CB A:ASP25 4.6 18.1 1.0 O A:HOH621 4.8 21.8 1.0 CG A:HIS52 4.8 16.0 1.0 CG A:ASP25 4.8 17.0 1.0 NE2 A:HIS52 4.8 16.0 1.0 O A:HOH645 4.9 20.2 1.0

Chlorine binding site 4 out of 8 in the Crystal Structure of A M20A Metallo Peptidase (Dape, LPG0809) From Legionella Pneumophila Subsp. Pneumophila Str. Philadelphia 1 at 1.50 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of A M20A Metallo Peptidase (Dape, LPG0809) From Legionella Pneumophila Subsp. Pneumophila Str. Philadelphia 1 at 1.50 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl508 b:19.7 occ:1.00 ZN A:ZN503 2.2 16.9 1.0 O A:HOH621 3.2 21.8 1.0 ND1 A:HIS52 3.4 11.6 1.0 NE2 A:GLN48 3.4 28.2 1.0 CG A:GLN48 3.7 23.5 1.0 CD1 A:ILE29 3.8 18.6 1.0 CL A:CL507 3.8 20.7 1.0 CG A:HIS52 3.9 16.0 1.0 CB A:HIS52 4.0 14.9 1.0 CD A:GLN48 4.1 34.4 1.0 CE1 A:HIS52 4.2 16.7 1.0 CG1 A:ILE29 4.3 16.1 1.0 O A:GLN48 4.6 15.6 1.0 O A:HOH975 4.7 14.7 0.5 O A:HOH663 4.8 15.7 0.5 O A:HOH975 4.9 21.9 0.5 CA A:HIS52 5.0 13.3 1.0 CD2 A:HIS52 5.0 16.8 1.0

Chlorine binding site 5 out of 8 in the Crystal Structure of A M20A Metallo Peptidase (Dape, LPG0809) From Legionella Pneumophila Subsp. Pneumophila Str. Philadelphia 1 at 1.50 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of A M20A Metallo Peptidase (Dape, LPG0809) From Legionella Pneumophila Subsp. Pneumophila Str. Philadelphia 1 at 1.50 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl509 b:29.0 occ:1.00 O A:HOH681 3.0 23.1 1.0 N A:LYS426 3.2 22.8 1.0 CA A:PHE424 3.4 19.9 1.0 C A:PHE424 3.4 22.2 1.0 N A:PRO425 3.5 23.7 1.0 CB A:LYS426 3.6 26.7 1.0 O A:HOH987 3.6 47.6 1.0 CD A:PRO425 3.7 24.3 1.0 CB A:PHE424 3.8 19.2 1.0 CA A:LYS426 3.8 22.5 1.0 CD A:LYS182 3.8 33.5 0.5 O A:PHE424 4.0 20.3 1.0 CG A:LYS426 4.0 31.2 1.0 N A:ALA427 4.1 18.8 1.0 C A:PRO425 4.2 23.3 1.0 CD1 A:PHE424 4.2 21.7 1.0 CG A:PRO425 4.2 30.7 1.0 C A:LYS426 4.3 20.7 1.0 CG A:LYS182 4.3 27.6 0.5 CA A:PRO425 4.4 24.6 1.0 CD A:LYS182 4.4 25.9 0.5 CG A:LYS182 4.5 22.0 0.5 CG A:PHE424 4.5 17.1 1.0 CE A:LYS182 4.6 29.0 0.5 N A:PHE424 4.7 21.1 1.0 NZ A:LYS182 4.7 30.4 0.5 O A:GLN423 4.7 23.8 1.0 O A:HOH739 4.8 35.2 1.0 CE A:LYS182 4.9 36.7 0.5 CB A:PRO425 5.0 26.8 1.0

Chlorine binding site 6 out of 8 in the Crystal Structure of A M20A Metallo Peptidase (Dape, LPG0809) From Legionella Pneumophila Subsp. Pneumophila Str. Philadelphia 1 at 1.50 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Crystal Structure of A M20A Metallo Peptidase (Dape, LPG0809) From Legionella Pneumophila Subsp. Pneumophila Str. Philadelphia 1 at 1.50 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl510 b:27.7 occ:1.00 O A:HOH692 2.9 28.5 1.0 NH1 A:ARG340 3.2 19.7 1.0 O A:HOH727 3.3 31.5 1.0 N A:THR413 3.3 17.9 1.0 NH2 A:ARG340 3.7 17.8 1.0 O A:THR413 3.7 16.0 1.0 O A:HOH768 3.8 34.3 1.0 CA A:GLY412 3.8 14.6 1.0 CZ A:ARG340 3.8 18.2 1.0 CB A:THR413 4.0 15.9 1.0 C3 A:GOL518 4.0 25.3 1.0 C A:GLY412 4.1 15.6 1.0 O1 A:GOL518 4.1 27.0 1.0 CA A:THR413 4.1 16.0 1.0 O3 A:GOL518 4.2 30.2 1.0 C A:THR413 4.4 16.5 1.0 OG1 A:THR413 4.5 17.3 1.0 CE1 A:HIS442 4.5 16.5 1.0 O A:HOH913 5.0 33.9 0.5

Chlorine binding site 7 out of 8 in the Crystal Structure of A M20A Metallo Peptidase (Dape, LPG0809) From Legionella Pneumophila Subsp. Pneumophila Str. Philadelphia 1 at 1.50 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 7 of Crystal Structure of A M20A Metallo Peptidase (Dape, LPG0809) From Legionella Pneumophila Subsp. Pneumophila Str. Philadelphia 1 at 1.50 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl511 b:41.7 occ:1.00 O A:HOH890 2.7 42.5 1.0 O A:HOH823 2.8 39.2 1.0 N A:TRP106 3.1 17.7 1.0 N A:GLY105 3.3 20.7 1.0 CB A:TRP106 3.5 20.3 1.0 CD1 A:TRP106 3.6 18.5 1.0 O A:HOH901 3.7 48.5 1.0 CA A:TRP106 3.8 19.6 1.0 CA A:SER104 3.9 23.8 0.5 C A:SER104 4.0 23.3 1.0 CG A:TRP106 4.0 18.3 1.0 CA A:SER104 4.0 23.2 0.5 C A:GLY105 4.0 18.2 1.0 CA A:GLY105 4.1 21.0 1.0 O A:TRP106 4.2 22.5 1.0 O A:MSE103 4.2 23.8 1.0 C A:TRP106 4.5 22.0 1.0 O A:HOH967 4.7 45.8 1.0 CB A:SER104 4.7 24.2 0.5 O A:HOH914 4.8 50.1 1.0 NE1 A:TRP106 4.9 19.6 1.0 CB A:SER104 4.9 22.8 0.5 O A:HOH966 4.9 43.7 1.0 N A:SER104 5.0 23.8 1.0 C A:MSE103 5.0 24.5 1.0 O A:SER104 5.0 22.5 1.0

Chlorine binding site 8 out of 8 in the Crystal Structure of A M20A Metallo Peptidase (Dape, LPG0809) From Legionella Pneumophila Subsp. Pneumophila Str. Philadelphia 1 at 1.50 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 8 of Crystal Structure of A M20A Metallo Peptidase (Dape, LPG0809) From Legionella Pneumophila Subsp. Pneumophila Str. Philadelphia 1 at 1.50 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl512 b:53.8 occ:1.00 N A:ALA38 2.9 21.3 1.0 CA A:ASP37 3.6 18.9 1.0 C A:ASP37 3.7 21.4 1.0 CB A:ALA38 3.7 24.1 1.0 O A:HOH1014 3.7 48.1 1.0 N A:ASP37 3.8 18.8 1.0 CA A:ALA38 3.9 21.1 1.0 C A:PHE36 4.0 18.3 1.0 O A:PHE36 4.1 21.1 1.0 O A:HOH835 4.6 23.8 0.5 O A:HIS35 4.6 17.7 1.0 OD1 A:ASP37 4.8 23.6 1.0 CA A:PHE36 4.9 15.1 1.0 O A:ASP37 4.9 19.2 1.0 O A:PRO34 5.0 16.4 1.0 CB A:ASP37 5.0 19.8 1.0

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.