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Chlorine in PDB 3ph6: Bovine Beta Lactoglobulin Crytsallized Through Ligandation of Yttrium

Protein crystallography data

The structure of Bovine Beta Lactoglobulin Crytsallized Through Ligandation of Yttrium, PDB code: 3ph6 was solved by G.Zocher, T.Stehle, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.64 / 2.53
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 41.060, 63.710, 134.160, 90.00, 90.00, 90.00
R / Rfree (%) 21.6 / 26.5

Other elements in 3ph6:

The structure of Bovine Beta Lactoglobulin Crytsallized Through Ligandation of Yttrium also contains other interesting chemical elements:

Yttrium (Y) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Bovine Beta Lactoglobulin Crytsallized Through Ligandation of Yttrium (pdb code 3ph6). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Bovine Beta Lactoglobulin Crytsallized Through Ligandation of Yttrium, PDB code: 3ph6:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3ph6

Go back to Chlorine Binding Sites List in 3ph6
Chlorine binding site 1 out of 2 in the Bovine Beta Lactoglobulin Crytsallized Through Ligandation of Yttrium


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Bovine Beta Lactoglobulin Crytsallized Through Ligandation of Yttrium within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl5

b:10.7
occ:1.00
Y A:YT32 2.5 2.0 1.0
OE2 A:GLU143 3.2 11.7 1.0
CB A:PRO169 4.0 11.1 1.0
CD A:GLU143 4.0 11.0 1.0
OE1 A:GLU143 4.0 12.5 1.0
CG A:PRO169 4.3 11.0 1.0
O A:PRO142 5.0 8.9 1.0

Chlorine binding site 2 out of 2 in 3ph6

Go back to Chlorine Binding Sites List in 3ph6
Chlorine binding site 2 out of 2 in the Bovine Beta Lactoglobulin Crytsallized Through Ligandation of Yttrium


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Bovine Beta Lactoglobulin Crytsallized Through Ligandation of Yttrium within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl6

b:26.5
occ:1.00
Y A:YT31 2.6 2.0 1.0
OE2 A:GLU90 3.2 14.2 1.0
OE1 A:GLU90 3.2 14.3 1.0
CD A:GLU90 3.5 14.0 1.0
OE1 A:GLU67 3.8 13.7 1.0
OD2 A:ASP69 4.2 8.8 1.0
CD A:GLU67 4.9 13.6 1.0
CG A:GLU90 5.0 13.0 1.0

Reference:

F.Zhang, G.Zocher, A.Sauter, T.Stehle, F.Schreiber. Novel Approach to Protein Crystallization Through Ligandation of Yttrium Cations J.Appl.Crystallogr. V. 44 755 2011.
ISSN: ISSN 0021-8898
DOI: 10.1107/S0021889811017997
Page generated: Sun Jul 21 02:23:56 2024

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