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Chlorine in PDB 3pjk: Urate Oxidase Under 1.0 Mpa / 10 Bars Pressure of Xenon

Enzymatic activity of Urate Oxidase Under 1.0 Mpa / 10 Bars Pressure of Xenon

All present enzymatic activity of Urate Oxidase Under 1.0 Mpa / 10 Bars Pressure of Xenon:
1.7.3.3;

Protein crystallography data

The structure of Urate Oxidase Under 1.0 Mpa / 10 Bars Pressure of Xenon, PDB code: 3pjk was solved by G.Marassio, N.Colloc'h, T.Prange, J.H.Abraini, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.45 / 1.70
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 80.117, 96.183, 105.463, 90.00, 90.00, 90.00
R / Rfree (%) 16.7 / 19.2

Other elements in 3pjk:

The structure of Urate Oxidase Under 1.0 Mpa / 10 Bars Pressure of Xenon also contains other interesting chemical elements:

Xenon (Xe) 2 atoms
Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Urate Oxidase Under 1.0 Mpa / 10 Bars Pressure of Xenon (pdb code 3pjk). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Urate Oxidase Under 1.0 Mpa / 10 Bars Pressure of Xenon, PDB code: 3pjk:

Chlorine binding site 1 out of 1 in 3pjk

Go back to Chlorine Binding Sites List in 3pjk
Chlorine binding site 1 out of 1 in the Urate Oxidase Under 1.0 Mpa / 10 Bars Pressure of Xenon


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Urate Oxidase Under 1.0 Mpa / 10 Bars Pressure of Xenon within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl402

b:20.4
occ:1.00
ND2 A:ASN254 3.0 21.1 1.0
CA A:GLY286 3.4 11.5 1.0
C4 A:AZA302 3.5 13.0 1.0
CB A:ASN254 3.5 15.0 1.0
C5 A:AZA302 3.6 12.4 1.0
CE1 A:HIS256 3.7 16.2 1.0
N9 A:AZA302 3.7 13.5 1.0
CG A:ASN254 3.7 18.9 1.0
N7 A:AZA302 3.9 14.6 1.0
N8 A:AZA302 3.9 13.4 1.0
N3 A:AZA302 3.9 13.2 1.0
N A:GLY286 4.1 11.7 1.0
C6 A:AZA302 4.1 12.3 1.0
NE2 A:HIS256 4.2 17.1 1.0
C2 A:AZA302 4.3 12.9 1.0
N1 A:AZA302 4.4 13.0 1.0
C A:GLY286 4.5 10.2 1.0
CD1 A:ILE288 4.5 20.6 1.0
O6 A:AZA302 4.7 15.9 1.0
ND1 A:HIS256 4.8 17.0 1.0
CA A:ASN254 4.9 14.3 1.0
OD1 A:ASN254 4.9 20.9 1.0
O A:HOH409 4.9 16.0 1.0
N A:LEU287 5.0 10.3 1.0

Reference:

G.Marassio, T.Prange, H.N.David, J.Sopkova-De Oliveira Santos, L.Gabison, N.Delcroix, J.H.Abraini, N.Colloc'h. Pressure-Response Analysis of Anesthetic Gases Xenon and Nitrous Oxide on Urate Oxidase: A Crystallographic Study. Faseb J. V. 25 2266 2011.
ISSN: ISSN 0892-6638
PubMed: 21421845
DOI: 10.1096/FJ.11-183046
Page generated: Sat Dec 12 10:02:37 2020

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