Atomistry » Chlorine » PDB 3pnf-3q12 » 3pxp
Atomistry »
  Chlorine »
    PDB 3pnf-3q12 »
      3pxp »

Chlorine in PDB 3pxp: Crystal Structure of A Pas and Dna Binding Domain Containing Protein (CAUR_2278) From Chloroflexus Aurantiacus J-10-Fl at 2.30 A Resolution

Protein crystallography data

The structure of Crystal Structure of A Pas and Dna Binding Domain Containing Protein (CAUR_2278) From Chloroflexus Aurantiacus J-10-Fl at 2.30 A Resolution, PDB code: 3pxp was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.75 / 2.30
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 228.807, 83.568, 54.520, 90.00, 103.12, 90.00
R / Rfree (%) 16.8 / 20.6

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A Pas and Dna Binding Domain Containing Protein (CAUR_2278) From Chloroflexus Aurantiacus J-10-Fl at 2.30 A Resolution (pdb code 3pxp). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 5 binding sites of Chlorine where determined in the Crystal Structure of A Pas and Dna Binding Domain Containing Protein (CAUR_2278) From Chloroflexus Aurantiacus J-10-Fl at 2.30 A Resolution, PDB code: 3pxp:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5;

Chlorine binding site 1 out of 5 in 3pxp

Go back to Chlorine Binding Sites List in 3pxp
Chlorine binding site 1 out of 5 in the Crystal Structure of A Pas and Dna Binding Domain Containing Protein (CAUR_2278) From Chloroflexus Aurantiacus J-10-Fl at 2.30 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Pas and Dna Binding Domain Containing Protein (CAUR_2278) From Chloroflexus Aurantiacus J-10-Fl at 2.30 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl302

b:64.2
occ:1.00
O A:HOH489 3.2 35.2 1.0
O A:HOH454 3.2 35.2 1.0
CE1 A:HIS231 3.8 24.4 1.0
NH2 A:ARG163 3.9 83.4 1.0
ND2 A:ASN132 3.9 47.4 1.0
CG2 A:VAL233 4.0 28.8 1.0
CB A:ASN132 4.0 32.4 1.0
NE2 A:HIS231 4.4 24.2 1.0
CG2 A:VAL164 4.5 42.5 1.0
CG A:ASN132 4.5 50.6 1.0
O A:PHE131 4.5 34.7 1.0
NH1 A:ARG163 4.7 95.8 1.0
CZ A:ARG163 4.8 0.2 1.0
ND1 A:HIS231 4.9 26.1 1.0

Chlorine binding site 2 out of 5 in 3pxp

Go back to Chlorine Binding Sites List in 3pxp
Chlorine binding site 2 out of 5 in the Crystal Structure of A Pas and Dna Binding Domain Containing Protein (CAUR_2278) From Chloroflexus Aurantiacus J-10-Fl at 2.30 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A Pas and Dna Binding Domain Containing Protein (CAUR_2278) From Chloroflexus Aurantiacus J-10-Fl at 2.30 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl306

b:49.9
occ:1.00
N B:ASN277 3.7 36.7 1.0
NE B:ARG129 3.7 74.6 1.0
CE B:MSE125 3.8 47.2 1.0
CA B:ALA276 3.9 39.2 1.0
NH2 B:ARG129 4.1 71.3 1.0
CB B:MSE125 4.2 33.5 1.0
CG B:MSE125 4.2 41.8 1.0
C B:ALA276 4.3 41.6 1.0
CB B:ALA276 4.4 38.6 1.0
CZ B:ARG129 4.4 87.5 1.0
CG B:ASN277 4.4 51.5 1.0
CB B:ASN277 4.5 34.5 1.0
O B:VAL275 4.5 48.3 1.0
OD1 B:ASN277 4.6 47.8 1.0
CD B:ARG129 4.7 64.5 1.0
CA B:ASN277 4.7 36.3 1.0
ND2 B:ASN277 4.8 39.0 1.0
CG B:ARG129 4.9 46.2 1.0
SE B:MSE125 5.0 50.3 0.8
N B:ALA276 5.0 40.8 1.0

Chlorine binding site 3 out of 5 in 3pxp

Go back to Chlorine Binding Sites List in 3pxp
Chlorine binding site 3 out of 5 in the Crystal Structure of A Pas and Dna Binding Domain Containing Protein (CAUR_2278) From Chloroflexus Aurantiacus J-10-Fl at 2.30 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of A Pas and Dna Binding Domain Containing Protein (CAUR_2278) From Chloroflexus Aurantiacus J-10-Fl at 2.30 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl303

b:80.5
occ:1.00
CD C:ARG91 3.3 64.5 1.0
NH1 C:ARG91 3.3 64.7 1.0
CB C:ARG91 3.8 49.0 1.0
CG C:ARG91 3.8 60.1 1.0
OG C:SER96 3.9 44.3 1.0
O C:HOH842 4.0 58.5 1.0
NE C:ARG91 4.2 64.1 1.0
CZ C:ARG91 4.2 76.5 1.0
CD1 C:ILE246 4.3 48.1 1.0
CA C:SER96 4.3 32.1 1.0
CB C:SER96 4.4 33.7 1.0
CD2 C:TYR99 4.4 37.2 1.0
CG C:TYR99 4.7 37.7 1.0
N C:ARG91 4.8 55.1 1.0
CE2 C:TYR99 4.9 38.3 1.0
CA C:ARG91 4.9 52.3 1.0
CB C:TYR99 4.9 35.9 1.0

Chlorine binding site 4 out of 5 in 3pxp

Go back to Chlorine Binding Sites List in 3pxp
Chlorine binding site 4 out of 5 in the Crystal Structure of A Pas and Dna Binding Domain Containing Protein (CAUR_2278) From Chloroflexus Aurantiacus J-10-Fl at 2.30 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of A Pas and Dna Binding Domain Containing Protein (CAUR_2278) From Chloroflexus Aurantiacus J-10-Fl at 2.30 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl304

b:64.0
occ:1.00
O C:GLY80 4.0 60.5 1.0
N C:ILE82 4.1 68.8 1.0
CD1 C:ILE81 4.1 70.8 1.0
CA C:ILE81 4.3 62.3 1.0
O C:HOH836 4.4 56.2 1.0
CD1 C:ILE82 4.5 75.4 1.0
C C:ILE81 4.7 68.4 1.0
CG1 C:ILE82 4.8 71.2 1.0
CB C:ILE82 4.8 72.9 1.0
C C:GLY80 4.9 61.5 1.0
O C:HOH857 5.0 59.1 1.0

Chlorine binding site 5 out of 5 in 3pxp

Go back to Chlorine Binding Sites List in 3pxp
Chlorine binding site 5 out of 5 in the Crystal Structure of A Pas and Dna Binding Domain Containing Protein (CAUR_2278) From Chloroflexus Aurantiacus J-10-Fl at 2.30 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of A Pas and Dna Binding Domain Containing Protein (CAUR_2278) From Chloroflexus Aurantiacus J-10-Fl at 2.30 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl305

b:86.8
occ:1.00
O C:HOH552 3.3 40.6 1.0
CB C:ARG162 3.8 29.1 1.0
O C:GLY156 4.0 35.9 1.0
OD1 C:ASP160 4.2 54.1 1.0
N C:ARG162 4.2 31.4 1.0
O C:PHE155 4.2 29.2 1.0
O C:VAL154 4.3 25.6 1.0
CH2 C:TRP169 4.3 28.7 1.0
NE C:ARG162 4.3 57.8 1.0
CZ2 C:TRP169 4.4 29.2 1.0
C C:PHE155 4.6 28.1 1.0
NH2 C:ARG162 4.6 62.2 1.0
CZ C:ARG162 4.6 73.8 1.0
CA C:ARG162 4.6 32.1 1.0
CG C:GLU205 4.7 33.6 1.0
N C:PHE161 4.8 30.7 1.0
CA C:PHE155 4.8 21.3 1.0
CZ3 C:TRP169 4.9 27.9 1.0
O C:HOH452 4.9 33.4 1.0
O C:TYR159 4.9 39.9 1.0
CD C:ARG162 5.0 39.3 1.0
C C:GLY156 5.0 34.1 1.0
O C:HOH517 5.0 36.5 1.0
CG C:ARG162 5.0 32.1 1.0
CB C:GLU205 5.0 27.5 1.0

Reference:

Q.Xu, G.P.Van Wezel, H.J.Chiu, L.Jaroszewski, H.E.Klock, M.W.Knuth, M.D.Miller, S.A.Lesley, A.Godzik, M.A.Elsliger, A.M.Deacon, I.A.Wilson. Structure of An Mmyb-Like Regulator From C. Aurantiacus, Member of A New Transcription Factor Family Linked to Antibiotic Metabolism in Actinomycetes. Plos One V. 7 41359 2012.
ISSN: ESSN 1932-6203
PubMed: 22844465
DOI: 10.1371/JOURNAL.PONE.0041359
Page generated: Sun Jul 21 02:37:53 2024

Last articles

Ca in 2TEP
Ca in 2TBV
Ca in 2TEC
Ca in 2TCL
Ca in 2TAA
Ca in 2TBS
Ca in 2ST1
Ca in 2SCP
Ca in 2STB
Ca in 2STA
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy