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Chlorine in PDB 3q0p: Crystal Structure of the Pumilio-Homology Domain From Human PUMILIO1 in Complex with Hunchback Nre

Protein crystallography data

The structure of Crystal Structure of the Pumilio-Homology Domain From Human PUMILIO1 in Complex with Hunchback Nre, PDB code: 3q0p was solved by G.Lu, T.M.T.Hall, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 23.79 / 2.60
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 262.326, 37.483, 82.299, 90.00, 102.83, 90.00
R / Rfree (%) 19.3 / 26.1

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the Pumilio-Homology Domain From Human PUMILIO1 in Complex with Hunchback Nre (pdb code 3q0p). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of the Pumilio-Homology Domain From Human PUMILIO1 in Complex with Hunchback Nre, PDB code: 3q0p:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3q0p

Go back to Chlorine Binding Sites List in 3q0p
Chlorine binding site 1 out of 2 in the Crystal Structure of the Pumilio-Homology Domain From Human PUMILIO1 in Complex with Hunchback Nre


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Pumilio-Homology Domain From Human PUMILIO1 in Complex with Hunchback Nre within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1

b:34.7
occ:1.00
NE2 A:HIS852 4.0 32.5 1.0
N A:ARG831 4.3 45.8 1.0
CB A:SER830 4.4 34.9 1.0
N A:LEU832 4.4 42.0 1.0
CE1 A:HIS852 4.5 32.7 1.0
CB A:ARG831 4.5 53.6 1.0
CA A:ARG831 4.9 49.2 1.0
CB A:LEU832 4.9 37.4 1.0

Chlorine binding site 2 out of 2 in 3q0p

Go back to Chlorine Binding Sites List in 3q0p
Chlorine binding site 2 out of 2 in the Crystal Structure of the Pumilio-Homology Domain From Human PUMILIO1 in Complex with Hunchback Nre


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of the Pumilio-Homology Domain From Human PUMILIO1 in Complex with Hunchback Nre within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl2

b:66.8
occ:1.00
NZ B:LYS1143 3.0 74.5 1.0
N B:SER1110 3.6 50.9 1.0
NE2 B:HIS1147 3.6 68.3 1.0
CA B:HIS1109 3.8 60.5 1.0
CE1 B:HIS1147 3.9 69.7 1.0
CB B:HIS1109 4.1 57.8 1.0
C B:HIS1109 4.1 52.1 1.0
CE B:LYS1143 4.2 72.0 1.0
CB B:SER1110 4.5 53.2 1.0
CA B:SER1110 4.6 51.8 1.0
O B:PRO1108 4.9 67.1 1.0
OG B:SER1110 4.9 55.5 1.0
CD2 B:HIS1147 4.9 69.1 1.0
N B:HIS1109 5.0 66.4 1.0

Reference:

G.Lu, T.M.Hall. Alternate Modes of Cognate Rna Recognition By Human Pumilio Proteins. Structure V. 19 361 2011.
ISSN: ISSN 0969-2126
PubMed: 21397187
DOI: 10.1016/J.STR.2010.12.019
Page generated: Sun Jul 21 02:39:56 2024

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