Atomistry » Chlorine » PDB 3qp0-3qvj » 3qqm
Atomistry »
  Chlorine »
    PDB 3qp0-3qvj »
      3qqm »

Chlorine in PDB 3qqm: Crystal Structure of A Putative Amino-Acid Aminotransferase (NP_104211.1) From Mesorhizobium Loti at 2.30 A Resolution

Protein crystallography data

The structure of Crystal Structure of A Putative Amino-Acid Aminotransferase (NP_104211.1) From Mesorhizobium Loti at 2.30 A Resolution, PDB code: 3qqm was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.68 / 2.30
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 116.178, 215.574, 81.875, 90.00, 90.00, 90.00
R / Rfree (%) 19.3 / 24.1

Other elements in 3qqm:

The structure of Crystal Structure of A Putative Amino-Acid Aminotransferase (NP_104211.1) From Mesorhizobium Loti at 2.30 A Resolution also contains other interesting chemical elements:

Iodine (I) 33 atoms

Chlorine Binding Sites:

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 14;

Binding sites:

The binding sites of Chlorine atom in the Crystal Structure of A Putative Amino-Acid Aminotransferase (NP_104211.1) From Mesorhizobium Loti at 2.30 A Resolution (pdb code 3qqm). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 14 binding sites of Chlorine where determined in the Crystal Structure of A Putative Amino-Acid Aminotransferase (NP_104211.1) From Mesorhizobium Loti at 2.30 A Resolution, PDB code: 3qqm:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Chlorine binding site 1 out of 14 in 3qqm

Go back to Chlorine Binding Sites List in 3qqm
Chlorine binding site 1 out of 14 in the Crystal Structure of A Putative Amino-Acid Aminotransferase (NP_104211.1) From Mesorhizobium Loti at 2.30 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Putative Amino-Acid Aminotransferase (NP_104211.1) From Mesorhizobium Loti at 2.30 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl248

b:36.8
occ:1.00
NE2 A:GLN24 2.8 23.0 1.0
NH1 A:ARG22 3.6 20.2 1.0
CD A:GLN24 3.9 22.9 1.0
CB A:ALA69 4.0 19.7 1.0
CD A:ARG22 4.1 18.7 1.0
CG A:GLN24 4.1 22.1 1.0
CD2 A:TYR89 4.5 21.3 1.0
CE2 A:TYR89 4.6 21.0 1.0
CZ A:ARG22 4.6 20.4 1.0
O A:HOH875 4.6 31.8 1.0
NE A:ARG22 4.7 19.3 1.0

Chlorine binding site 2 out of 14 in 3qqm

Go back to Chlorine Binding Sites List in 3qqm
Chlorine binding site 2 out of 14 in the Crystal Structure of A Putative Amino-Acid Aminotransferase (NP_104211.1) From Mesorhizobium Loti at 2.30 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A Putative Amino-Acid Aminotransferase (NP_104211.1) From Mesorhizobium Loti at 2.30 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl250

b:41.5
occ:1.00
NH2 A:ARG78 3.5 23.3 1.0
O A:LEU46 3.7 20.3 1.0
NH1 A:ARG78 3.9 24.6 1.0
CZ A:PHE15 4.0 22.2 1.0
CD2 A:LEU46 4.1 17.6 1.0
CZ A:ARG78 4.2 23.8 1.0
CE2 A:PHE15 4.3 22.4 1.0
CB A:LEU46 4.4 18.8 1.0
C A:LEU46 4.6 19.8 1.0
CA A:LEU46 4.6 19.4 1.0
CG A:LEU46 4.8 18.3 1.0

Chlorine binding site 3 out of 14 in 3qqm

Go back to Chlorine Binding Sites List in 3qqm
Chlorine binding site 3 out of 14 in the Crystal Structure of A Putative Amino-Acid Aminotransferase (NP_104211.1) From Mesorhizobium Loti at 2.30 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of A Putative Amino-Acid Aminotransferase (NP_104211.1) From Mesorhizobium Loti at 2.30 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl252

b:52.8
occ:1.00
NH1 A:ARG169 3.7 24.3 1.0
O A:GLU191 3.9 19.3 1.0
CA A:ALA192 4.0 18.4 1.0
CD A:ARG169 4.1 20.9 1.0
O A:HOH1025 4.3 23.9 1.0
C A:GLU191 4.4 18.9 1.0
N A:ALA192 4.4 18.2 1.0
CZ A:ARG169 4.6 24.1 1.0
CG1 A:ILE193 4.6 19.2 1.0
C A:ALA192 4.6 17.7 1.0
NE A:ARG169 4.7 22.4 1.0
CD1 A:ILE193 4.7 20.1 1.0
N A:ILE193 4.8 18.4 1.0
O A:HOH612 4.8 27.9 1.0

Chlorine binding site 4 out of 14 in 3qqm

Go back to Chlorine Binding Sites List in 3qqm
Chlorine binding site 4 out of 14 in the Crystal Structure of A Putative Amino-Acid Aminotransferase (NP_104211.1) From Mesorhizobium Loti at 2.30 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of A Putative Amino-Acid Aminotransferase (NP_104211.1) From Mesorhizobium Loti at 2.30 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl258

b:20.8
occ:1.00
O A:HOH819 2.6 33.1 1.0
OD1 A:ASP33 2.7 22.9 1.0
O A:HOH646 3.5 20.3 1.0
CG A:ASP33 3.6 20.5 1.0
CA A:ARG31 3.7 17.8 1.0
OD2 A:ASP33 3.9 22.4 1.0
CG A:ARG34 3.9 16.9 1.0
O A:HOH624 4.1 26.2 1.0
OE2 A:GLU182 4.2 24.2 1.0
NE A:ARG34 4.3 19.1 1.0
C A:ARG31 4.3 17.2 1.0
CG A:ARG31 4.3 17.9 1.0
CD A:ARG34 4.3 17.4 1.0
CB A:ARG31 4.3 17.4 1.0
O A:HOH574 4.4 21.4 1.0
N A:ARG34 4.6 16.2 1.0
N A:ARG31 4.6 18.0 1.0
O A:ARG31 4.7 16.2 1.0
CB A:ARG34 4.8 15.9 1.0
N A:PHE32 4.8 17.4 1.0
N A:ASP33 4.9 17.4 1.0
CB A:ASP33 5.0 18.6 1.0

Chlorine binding site 5 out of 14 in 3qqm

Go back to Chlorine Binding Sites List in 3qqm
Chlorine binding site 5 out of 14 in the Crystal Structure of A Putative Amino-Acid Aminotransferase (NP_104211.1) From Mesorhizobium Loti at 2.30 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of A Putative Amino-Acid Aminotransferase (NP_104211.1) From Mesorhizobium Loti at 2.30 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl260

b:55.9
occ:1.00
OE1 A:GLU182 3.3 22.4 1.0
OE1 A:GLU186 3.5 23.2 1.0
OE2 A:GLU186 3.6 23.4 1.0
CD A:GLU186 4.0 22.7 1.0
CD A:GLU182 4.2 21.4 1.0
CD2 A:LEU183 4.3 16.8 1.0
I A:IOD225 4.7 27.7 0.8
CG A:GLU182 4.7 18.3 1.0
NH1 A:ARG31 4.8 17.3 1.0
O A:HOH340 4.8 22.5 1.0

Chlorine binding site 6 out of 14 in 3qqm

Go back to Chlorine Binding Sites List in 3qqm
Chlorine binding site 6 out of 14 in the Crystal Structure of A Putative Amino-Acid Aminotransferase (NP_104211.1) From Mesorhizobium Loti at 2.30 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Crystal Structure of A Putative Amino-Acid Aminotransferase (NP_104211.1) From Mesorhizobium Loti at 2.30 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl257

b:28.5
occ:1.00
NH2 D:ARG78 3.5 21.7 1.0
CZ D:PHE15 3.9 19.9 1.0
NH1 D:ARG78 3.9 22.9 1.0
O D:LEU46 4.0 18.9 1.0
CZ D:ARG78 4.1 22.1 1.0
CD2 D:LEU46 4.2 17.6 1.0
CE2 D:PHE15 4.2 20.9 1.0
CB D:LEU46 4.3 18.2 1.0
CA D:LEU46 4.7 18.9 1.0
C D:LEU46 4.8 19.2 1.0
CG D:LEU46 4.8 17.5 1.0
CE1 D:PHE15 5.0 20.6 1.0

Chlorine binding site 7 out of 14 in 3qqm

Go back to Chlorine Binding Sites List in 3qqm
Chlorine binding site 7 out of 14 in the Crystal Structure of A Putative Amino-Acid Aminotransferase (NP_104211.1) From Mesorhizobium Loti at 2.30 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 7 of Crystal Structure of A Putative Amino-Acid Aminotransferase (NP_104211.1) From Mesorhizobium Loti at 2.30 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl259

b:26.1
occ:1.00
OD1 D:ASP33 2.4 23.2 1.0
O D:HOH908 2.7 38.2 1.0
CG D:ASP33 3.5 21.3 1.0
CA D:ARG31 3.6 19.0 1.0
O D:HOH604 3.7 16.6 1.0
CB E:ALA44 3.8 19.8 1.0
CG D:ARG34 3.9 17.3 1.0
OD2 D:ASP33 4.0 22.6 1.0
O D:HOH469 4.0 27.5 1.0
NE D:ARG34 4.0 19.4 1.0
C D:ARG31 4.1 18.6 1.0
CD D:ARG34 4.2 18.3 1.0
CG D:ARG31 4.2 19.0 1.0
CB D:ARG31 4.2 18.6 1.0
O D:ARG31 4.3 17.6 1.0
N D:ARG34 4.4 17.3 1.0
CA E:ALA44 4.5 19.9 1.0
N D:ARG31 4.6 19.3 1.0
OE2 D:GLU182 4.6 24.7 1.0
N D:ASP33 4.7 18.8 1.0
CB D:ARG34 4.7 16.4 1.0
N D:PHE32 4.8 18.8 1.0
CB D:ASP33 4.8 19.7 1.0

Chlorine binding site 8 out of 14 in 3qqm

Go back to Chlorine Binding Sites List in 3qqm
Chlorine binding site 8 out of 14 in the Crystal Structure of A Putative Amino-Acid Aminotransferase (NP_104211.1) From Mesorhizobium Loti at 2.30 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 8 of Crystal Structure of A Putative Amino-Acid Aminotransferase (NP_104211.1) From Mesorhizobium Loti at 2.30 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Cl247

b:48.3
occ:1.00
NH2 E:ARG31 3.6 19.7 1.0
NH1 E:ARG31 3.7 19.4 1.0
O E:HOH565 4.0 22.0 1.0
CZ E:ARG31 4.1 19.1 1.0
NH2 E:ARG22 4.2 19.3 1.0
CD1 E:LEU30 4.2 21.4 1.0
CA E:GLY213 4.3 16.4 1.0
CA B:GLY187 4.6 27.6 1.0
O B:GLY187 4.8 26.7 1.0
CZ E:ARG22 4.8 19.6 1.0
N E:GLY213 4.8 16.2 1.0
NH1 E:ARG22 4.9 20.4 1.0

Chlorine binding site 9 out of 14 in 3qqm

Go back to Chlorine Binding Sites List in 3qqm
Chlorine binding site 9 out of 14 in the Crystal Structure of A Putative Amino-Acid Aminotransferase (NP_104211.1) From Mesorhizobium Loti at 2.30 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 9 of Crystal Structure of A Putative Amino-Acid Aminotransferase (NP_104211.1) From Mesorhizobium Loti at 2.30 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Cl251

b:45.6
occ:1.00
NH2 E:ARG78 3.6 25.2 1.0
O E:LEU46 4.0 22.0 1.0
CD2 E:LEU46 4.1 20.5 1.0
NH1 E:ARG78 4.1 25.1 1.0
CZ E:PHE15 4.2 22.7 1.0
CZ E:ARG78 4.3 24.7 1.0
CE2 E:PHE15 4.4 23.4 1.0
CB E:LEU46 4.5 20.4 1.0
CA E:LEU46 4.7 20.9 1.0
C E:LEU46 4.8 21.5 1.0
CG E:LEU46 4.9 19.7 1.0

Chlorine binding site 10 out of 14 in 3qqm

Go back to Chlorine Binding Sites List in 3qqm
Chlorine binding site 10 out of 14 in the Crystal Structure of A Putative Amino-Acid Aminotransferase (NP_104211.1) From Mesorhizobium Loti at 2.30 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 10 of Crystal Structure of A Putative Amino-Acid Aminotransferase (NP_104211.1) From Mesorhizobium Loti at 2.30 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Cl256

b:27.7
occ:1.00
O1 E:EDO273 2.6 39.2 1.0
CD1 E:LEU123 3.3 24.1 1.0
ND2 E:ASN111 3.3 20.7 1.0
O E:HOH1034 3.4 29.5 1.0
N E:ASP108 3.4 21.3 1.0
CB E:ASP108 3.6 22.8 1.0
C1 E:EDO273 3.9 39.2 1.0
CB E:ASN111 4.0 22.7 1.0
CA E:ASP108 4.1 22.1 1.0
CG E:ASN111 4.2 22.1 1.0
CA E:LEU107 4.3 20.3 1.0
C E:LEU107 4.3 20.9 1.0
CD2 E:LEU107 4.3 19.0 1.0
O E:ASP108 4.4 21.7 1.0
CG E:LEU123 4.4 23.7 1.0
CD2 E:LEU114 4.4 15.3 1.0
C E:ASP108 4.8 22.0 1.0
CD1 E:LEU114 4.8 17.5 1.0
CB E:LEU107 4.8 19.5 1.0
C2 E:EDO273 4.9 39.5 1.0
CG E:LEU114 4.9 18.0 1.0
CG E:ASP108 5.0 24.1 1.0
O E:ARG106 5.0 20.9 1.0

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Sat Dec 12 10:05:15 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy