Atomistry » Chlorine » PDB 3qvm-3r3y » 3qzu
Atomistry »
  Chlorine »
    PDB 3qvm-3r3y »
      3qzu »

Chlorine in PDB 3qzu: Crystal Structure of Bacillus Subtilis Lipase A 7-Fold Mutant; the Outcome of Directed Evolution Towards Thermostability

Enzymatic activity of Crystal Structure of Bacillus Subtilis Lipase A 7-Fold Mutant; the Outcome of Directed Evolution Towards Thermostability

All present enzymatic activity of Crystal Structure of Bacillus Subtilis Lipase A 7-Fold Mutant; the Outcome of Directed Evolution Towards Thermostability:
3.1.1.3;

Protein crystallography data

The structure of Crystal Structure of Bacillus Subtilis Lipase A 7-Fold Mutant; the Outcome of Directed Evolution Towards Thermostability, PDB code: 3qzu was solved by T.Pijning, W.Augustyniak, M.T.Reetz, B.W.Dijkstra, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 76.16 / 1.85
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 59.163, 45.511, 77.613, 90.00, 101.10, 90.00
R / Rfree (%) 17.3 / 22.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Bacillus Subtilis Lipase A 7-Fold Mutant; the Outcome of Directed Evolution Towards Thermostability (pdb code 3qzu). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Bacillus Subtilis Lipase A 7-Fold Mutant; the Outcome of Directed Evolution Towards Thermostability, PDB code: 3qzu:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3qzu

Go back to Chlorine Binding Sites List in 3qzu
Chlorine binding site 1 out of 2 in the Crystal Structure of Bacillus Subtilis Lipase A 7-Fold Mutant; the Outcome of Directed Evolution Towards Thermostability


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Bacillus Subtilis Lipase A 7-Fold Mutant; the Outcome of Directed Evolution Towards Thermostability within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl182

b:13.5
occ:1.00
OG A:SER77 2.9 8.2 1.0
O A:HOH272 3.1 16.1 1.0
N A:ILE12 3.2 7.1 1.0
N A:MET78 3.3 6.1 1.0
CB A:SER77 3.4 6.5 1.0
CB A:MET78 3.5 6.2 1.0
CB A:ILE12 3.7 8.3 1.0
CG1 A:ILE12 3.7 8.4 1.0
CA A:GLY11 3.9 5.9 1.0
CD1 A:ILE12 4.0 9.7 1.0
CA A:ILE12 4.0 8.3 1.0
C A:GLY11 4.0 6.6 1.0
CA A:MET78 4.0 5.6 1.0
O A:HOH342 4.1 37.5 1.0
C A:SER77 4.3 6.6 1.0
CA A:SER77 4.5 6.3 1.0
O A:ILE12 4.5 8.4 1.0
O A:HOH336 4.6 22.5 1.0
C A:ILE12 4.8 8.6 1.0
CG A:MET78 4.8 5.8 1.0
NE2 A:HIS156 4.8 7.5 1.0
O A:HOH221 4.9 30.0 1.0

Chlorine binding site 2 out of 2 in 3qzu

Go back to Chlorine Binding Sites List in 3qzu
Chlorine binding site 2 out of 2 in the Crystal Structure of Bacillus Subtilis Lipase A 7-Fold Mutant; the Outcome of Directed Evolution Towards Thermostability


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Bacillus Subtilis Lipase A 7-Fold Mutant; the Outcome of Directed Evolution Towards Thermostability within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl182

b:19.5
occ:1.00
OG B:SER77 3.0 8.5 1.0
O B:HOH314 3.1 22.1 1.0
N B:ILE12 3.1 10.3 1.0
N B:MET78 3.3 8.0 1.0
CB B:SER77 3.4 8.4 1.0
CB B:MET78 3.5 8.4 1.0
CB B:ILE12 3.6 11.0 1.0
CG1 B:ILE12 3.6 10.8 1.0
CD1 B:ILE12 3.9 11.4 1.0
CA B:ILE12 3.9 11.0 1.0
CA B:GLY11 4.0 8.9 1.0
CA B:MET78 4.0 8.3 1.0
C B:GLY11 4.0 9.6 1.0
O3 B:GOL185 4.1 47.4 1.0
C B:SER77 4.3 8.0 1.0
O B:HOH340 4.3 22.5 1.0
CA B:SER77 4.5 8.1 1.0
O B:ILE12 4.5 12.1 1.0
C3 B:GOL185 4.7 46.4 1.0
CG B:MET78 4.7 10.8 1.0
C B:ILE12 4.7 11.4 1.0
NE2 B:HIS156 4.9 11.3 1.0
CG2 B:ILE12 5.0 10.0 1.0

Reference:

W.Augustyniak, A.A.Brzezinska, T.Pijning, H.Wienk, R.Boelens, B.W.Dijkstra, M.T.Reetz. Biophysical Characterization of Mutants of Bacillus Subtilis Lipase Evolved For Thermostability: Factors Contributing to Increased Activity Retention. Protein Sci. V. 21 487 2012.
ISSN: ISSN 0961-8368
PubMed: 22267088
DOI: 10.1002/PRO.2031
Page generated: Sun Jul 21 03:19:16 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy