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Chlorine in PDB 3r7c: The Structure of A Hexahestidine-Tagged Form of Augmenter of Liver Regeneration Reveals A Novel Cd(2)Cl(4)O(6) Cluster That Aids in Crystal Packing

Enzymatic activity of The Structure of A Hexahestidine-Tagged Form of Augmenter of Liver Regeneration Reveals A Novel Cd(2)Cl(4)O(6) Cluster That Aids in Crystal Packing

All present enzymatic activity of The Structure of A Hexahestidine-Tagged Form of Augmenter of Liver Regeneration Reveals A Novel Cd(2)Cl(4)O(6) Cluster That Aids in Crystal Packing:
1.8.3.2;

Protein crystallography data

The structure of The Structure of A Hexahestidine-Tagged Form of Augmenter of Liver Regeneration Reveals A Novel Cd(2)Cl(4)O(6) Cluster That Aids in Crystal Packing, PDB code: 3r7c was solved by Q.J.Florence, C.-K.Wu, J.T.Swindell Ii, B.C.Wang, J.P.Rose, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.64 / 2.40
Space group I 41
Cell size a, b, c (Å), α, β, γ (°) 99.688, 99.688, 113.610, 90.00, 90.00, 90.00
R / Rfree (%) 16.2 / 21.1

Other elements in 3r7c:

The structure of The Structure of A Hexahestidine-Tagged Form of Augmenter of Liver Regeneration Reveals A Novel Cd(2)Cl(4)O(6) Cluster That Aids in Crystal Packing also contains other interesting chemical elements:

Cadmium (Cd) 5 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the The Structure of A Hexahestidine-Tagged Form of Augmenter of Liver Regeneration Reveals A Novel Cd(2)Cl(4)O(6) Cluster That Aids in Crystal Packing (pdb code 3r7c). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 10 binding sites of Chlorine where determined in the The Structure of A Hexahestidine-Tagged Form of Augmenter of Liver Regeneration Reveals A Novel Cd(2)Cl(4)O(6) Cluster That Aids in Crystal Packing, PDB code: 3r7c:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Chlorine binding site 1 out of 10 in 3r7c

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Chlorine binding site 1 out of 10 in the The Structure of A Hexahestidine-Tagged Form of Augmenter of Liver Regeneration Reveals A Novel Cd(2)Cl(4)O(6) Cluster That Aids in Crystal Packing


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Structure of A Hexahestidine-Tagged Form of Augmenter of Liver Regeneration Reveals A Novel Cd(2)Cl(4)O(6) Cluster That Aids in Crystal Packing within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl130

b:44.9
occ:1.00
 O A:HOH223 2.6 62.8 1.0
O B:HOH222 2.7 60.7 1.0
NE2 A:GLN47 2.8 31.7 1.0
O A:HOH168 3.1 28.8 1.0
OE1 A:GLU44 3.5 63.0 1.0
CD A:GLN47 4.0 33.5 1.0
NE B:ARG75 4.3 20.8 1.0
NH2 B:ARG75 4.3 22.3 1.0
CD A:GLU44 4.4 59.2 1.0
OE2 A:GLU44 4.4 59.0 1.0
OE1 A:GLN47 4.4 39.3 1.0
CZ B:ARG75 4.8 23.6 1.0

Chlorine binding site 2 out of 10 in 3r7c

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Chlorine binding site 2 out of 10 in the The Structure of A Hexahestidine-Tagged Form of Augmenter of Liver Regeneration Reveals A Novel Cd(2)Cl(4)O(6) Cluster That Aids in Crystal Packing


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of The Structure of A Hexahestidine-Tagged Form of Augmenter of Liver Regeneration Reveals A Novel Cd(2)Cl(4)O(6) Cluster That Aids in Crystal Packing within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl131

b:44.5
occ:1.00
 O C:HOH150 2.5 43.0 1.0
OD1 A:ASP48 2.7 21.3 1.0
OE2 A:GLU44 2.7 59.0 1.0
OD2 A:ASP48 3.0 24.9 1.0
CG A:ASP48 3.2 21.6 1.0
NZ C:LYS58 3.2 36.1 1.0
CG A:GLU44 3.5 47.8 1.0
CD A:GLU44 3.5 59.2 1.0
NH2 B:ARG75 3.6 22.3 1.0
CZ B:ARG75 4.4 23.6 1.0
NH1 B:ARG75 4.5 23.0 1.0
CE C:LYS58 4.5 35.1 1.0
O A:GLU44 4.6 22.1 1.0
OE1 A:GLU44 4.6 63.0 1.0
CB A:ASP48 4.7 16.7 1.0
CB A:GLU44 4.9 32.8 1.0

Chlorine binding site 3 out of 10 in 3r7c

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Chlorine binding site 3 out of 10 in the The Structure of A Hexahestidine-Tagged Form of Augmenter of Liver Regeneration Reveals A Novel Cd(2)Cl(4)O(6) Cluster That Aids in Crystal Packing


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of The Structure of A Hexahestidine-Tagged Form of Augmenter of Liver Regeneration Reveals A Novel Cd(2)Cl(4)O(6) Cluster That Aids in Crystal Packing within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl502

b:16.2
occ:1.00
 CD A:CD500 2.6 20.0 1.0
CD A:CD501 2.7 19.1 1.0
O A:HOH506 3.3 9.0 1.0
ND1 A:HIS54 3.4 12.7 1.0
CB A:HIS54 3.4 8.9 1.0
O A:HIS54 3.5 21.7 1.0
OD1 B:ASP74 3.6 17.5 1.0
CD A:LYS58 3.7 31.0 1.0
CL A:CL503 3.7 22.1 1.0
CG A:HIS54 3.8 14.5 1.0
OD2 B:ASP74 3.8 18.4 1.0
CL A:CL504 3.9 22.8 1.0
CL A:CL505 3.9 16.8 1.0
C A:HIS54 3.9 18.8 1.0
CG A:LYS58 4.0 29.9 1.0
CG B:ASP74 4.0 17.1 1.0
CA A:HIS54 4.0 11.1 1.0
OD1 A:ASP74 4.0 16.2 1.0
OG A:SER57 4.2 16.7 1.0
CE1 A:HIS54 4.6 17.1 1.0
CE A:LYS58 4.7 31.1 1.0
N A:ILE55 4.8 20.7 1.0
NZ A:LYS58 4.8 34.2 1.0
OD2 A:ASP74 4.8 20.9 1.0
CG A:ASP74 4.9 18.9 1.0

Chlorine binding site 4 out of 10 in 3r7c

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Chlorine binding site 4 out of 10 in the The Structure of A Hexahestidine-Tagged Form of Augmenter of Liver Regeneration Reveals A Novel Cd(2)Cl(4)O(6) Cluster That Aids in Crystal Packing


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of The Structure of A Hexahestidine-Tagged Form of Augmenter of Liver Regeneration Reveals A Novel Cd(2)Cl(4)O(6) Cluster That Aids in Crystal Packing within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl503

b:22.1
occ:1.00
 CD A:CD501 2.6 19.1 1.0
CD A:CD500 2.7 20.0 1.0
ND1 B:HIS54 3.4 17.5 1.0
O A:HOH160 3.5 36.8 1.0
OD2 A:ASP74 3.5 20.9 1.0
CB B:HIS54 3.6 17.9 1.0
O A:HOH507 3.6 22.2 1.0
O B:HIS54 3.6 19.6 1.0
CE B:LYS58 3.6 18.5 1.0
CL A:CL502 3.7 16.2 1.0
OD1 A:ASP74 3.7 16.2 1.0
NZ B:LYS58 3.8 20.1 1.0
CD B:LYS58 3.8 19.6 1.0
CG B:HIS54 3.9 19.6 1.0
CL A:CL504 3.9 22.8 1.0
CG A:ASP74 3.9 18.9 1.0
CL A:CL505 4.0 16.8 1.0
OD1 B:ASP74 4.0 17.5 1.0
C B:HIS54 4.0 19.2 1.0
CA B:HIS54 4.1 14.2 1.0
CG B:LYS58 4.2 17.1 1.0
OG B:SER57 4.3 15.9 1.0
CE1 B:HIS54 4.5 22.3 1.0
O A:HOH506 4.9 9.0 1.0
CG B:ASP74 4.9 17.1 1.0
N B:ILE55 4.9 19.2 1.0
OD2 B:ASP74 5.0 18.4 1.0

Chlorine binding site 5 out of 10 in 3r7c

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Chlorine binding site 5 out of 10 in the The Structure of A Hexahestidine-Tagged Form of Augmenter of Liver Regeneration Reveals A Novel Cd(2)Cl(4)O(6) Cluster That Aids in Crystal Packing


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of The Structure of A Hexahestidine-Tagged Form of Augmenter of Liver Regeneration Reveals A Novel Cd(2)Cl(4)O(6) Cluster That Aids in Crystal Packing within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl504

b:22.8
occ:1.00
 CD A:CD500 2.5 20.0 1.0
NZ B:LYS58 3.2 20.1 1.0
NH1 A:ARG70 3.2 49.4 1.0
CG A:ARG70 3.4 36.0 1.0
NZ A:LYS58 3.6 34.2 1.0
CD A:ARG70 3.7 38.1 1.0
O A:HOH506 3.8 9.0 1.0
OD2 A:ASP74 3.8 20.9 1.0
CL A:CL502 3.9 16.2 1.0
O A:HOH197 3.9 48.5 1.0
CG A:LYS58 3.9 29.9 1.0
CL A:CL503 3.9 22.1 1.0
O A:HOH160 4.1 36.8 1.0
CD B:LYS58 4.2 19.6 1.0
O A:HOH176 4.2 36.4 1.0
CZ A:ARG70 4.2 48.4 1.0
CE B:LYS58 4.2 18.5 1.0
CD A:LYS58 4.3 31.0 1.0
NE A:ARG70 4.4 43.7 1.0
CE A:LYS58 4.6 31.1 1.0
CB A:ARG70 4.7 26.5 1.0
CG A:ASP74 4.8 18.9 1.0
CL A:CL505 4.9 16.8 1.0
OD1 A:ASP74 4.9 16.2 1.0
CD A:CD501 4.9 19.1 1.0

Chlorine binding site 6 out of 10 in 3r7c

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Chlorine binding site 6 out of 10 in the The Structure of A Hexahestidine-Tagged Form of Augmenter of Liver Regeneration Reveals A Novel Cd(2)Cl(4)O(6) Cluster That Aids in Crystal Packing


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of The Structure of A Hexahestidine-Tagged Form of Augmenter of Liver Regeneration Reveals A Novel Cd(2)Cl(4)O(6) Cluster That Aids in Crystal Packing within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl505

b:16.8
occ:1.00
 CD A:CD501 2.4 19.1 1.0
NH1 B:ARG70 3.0 32.2 1.0
CG B:ARG70 3.3 29.1 1.0
CD B:ARG70 3.5 33.5 1.0
O A:HOH507 3.6 22.2 1.0
OD2 B:ASP74 3.7 18.4 1.0
NZ A:LYS58 3.7 34.2 1.0
CE A:LYS58 3.9 31.1 1.0
CL A:CL502 3.9 16.2 1.0
CL A:CL503 4.0 22.1 1.0
CG B:LYS58 4.0 17.1 1.0
CZ B:ARG70 4.0 35.9 1.0
CD B:LYS58 4.0 19.6 1.0
CD A:LYS58 4.0 31.0 1.0
NE B:ARG70 4.2 37.9 1.0
CG B:ASP74 4.6 17.1 1.0
CB B:ARG70 4.6 25.0 1.0
OD1 B:ASP74 4.7 17.5 1.0
CL A:CL504 4.9 22.8 1.0
O B:ARG70 4.9 17.9 1.0
CD A:CD500 5.0 20.0 1.0

Chlorine binding site 7 out of 10 in 3r7c

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Chlorine binding site 7 out of 10 in the The Structure of A Hexahestidine-Tagged Form of Augmenter of Liver Regeneration Reveals A Novel Cd(2)Cl(4)O(6) Cluster That Aids in Crystal Packing


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 7 of The Structure of A Hexahestidine-Tagged Form of Augmenter of Liver Regeneration Reveals A Novel Cd(2)Cl(4)O(6) Cluster That Aids in Crystal Packing within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl132

b:53.1
occ:1.00
 O B:HOH174 2.7 39.3 1.0
O B:HOH185 2.7 41.4 1.0
O B:CYS15 2.8 40.0 1.0
NE2 B:GLN17 2.8 47.0 1.0
CD B:GLN17 3.8 43.3 1.0
OE2 B:GLU21 3.8 34.7 1.0
C B:CYS15 3.8 39.1 1.0
N B:CYS15 3.9 43.6 1.0
OE1 B:GLN17 4.0 43.3 1.0
O B:PRO16 4.1 35.6 1.0
CD B:GLU21 4.1 34.3 1.0
OE1 B:GLU21 4.3 36.0 1.0
CA B:CYS15 4.3 40.8 1.0
C B:PRO16 4.5 33.9 1.0
CB B:CYS15 4.6 40.6 1.0
N B:ASP14 4.8 46.3 1.0
N B:GLN17 4.8 34.3 1.0
N B:PRO16 4.9 35.4 1.0
CA B:GLN17 4.9 33.6 1.0
C B:ASP14 4.9 43.2 1.0

Chlorine binding site 8 out of 10 in 3r7c

Go back to Chlorine Binding Sites List in 3r7c
Chlorine binding site 8 out of 10 in the The Structure of A Hexahestidine-Tagged Form of Augmenter of Liver Regeneration Reveals A Novel Cd(2)Cl(4)O(6) Cluster That Aids in Crystal Packing


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 8 of The Structure of A Hexahestidine-Tagged Form of Augmenter of Liver Regeneration Reveals A Novel Cd(2)Cl(4)O(6) Cluster That Aids in Crystal Packing within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl133

b:69.5
occ:1.00
 NE B:ARG92 3.1 17.0 1.0
O B:HOH155 3.2 26.8 1.0
NH2 B:ARG92 3.3 17.0 1.0
CZ B:ARG92 3.6 17.7 1.0
O B:HOH213 3.8 43.5 1.0
NH2 B:ARG72 3.9 49.3 1.0
CD1 B:TRP89 4.0 11.8 1.0
CD B:ARG92 4.2 17.3 1.0
O B:HOH200 4.3 29.9 1.0
CB B:SER76 4.4 23.7 1.0
NE1 B:TRP89 4.4 13.5 1.0
CB B:ARG92 4.4 19.6 1.0
CZ B:ARG72 4.7 52.0 1.0
OG B:SER76 4.9 31.6 1.0
CG B:ARG92 5.0 19.4 1.0
NH1 B:ARG92 5.0 18.2 1.0

Chlorine binding site 9 out of 10 in 3r7c

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Chlorine binding site 9 out of 10 in the The Structure of A Hexahestidine-Tagged Form of Augmenter of Liver Regeneration Reveals A Novel Cd(2)Cl(4)O(6) Cluster That Aids in Crystal Packing


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 9 of The Structure of A Hexahestidine-Tagged Form of Augmenter of Liver Regeneration Reveals A Novel Cd(2)Cl(4)O(6) Cluster That Aids in Crystal Packing within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl128

b:47.2
occ:1.00
 ND2 C:ASN25 3.6 21.6 1.0
NE2 C:GLN17 3.6 33.6 1.0
CB C:GLU21 4.1 32.0 1.0
OE1 C:GLN17 4.2 36.6 1.0
CG C:GLU21 4.2 37.6 1.0
CD C:GLN17 4.3 34.2 1.0
OE2 C:GLU21 4.4 45.4 1.0
CD C:GLU21 4.4 43.8 1.0
CG C:ASN25 4.5 26.2 1.0
OD1 C:ASN25 4.6 30.4 1.0
CA C:GLU21 4.9 29.5 1.0
O C:GLU21 5.0 17.4 1.0

Chlorine binding site 10 out of 10 in 3r7c

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Chlorine binding site 10 out of 10 in the The Structure of A Hexahestidine-Tagged Form of Augmenter of Liver Regeneration Reveals A Novel Cd(2)Cl(4)O(6) Cluster That Aids in Crystal Packing


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 10 of The Structure of A Hexahestidine-Tagged Form of Augmenter of Liver Regeneration Reveals A Novel Cd(2)Cl(4)O(6) Cluster That Aids in Crystal Packing within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl128

b:63.9
occ:1.00
 O D:HOH148 2.7 28.2 1.0
OE2 D:GLU21 3.7 47.0 1.0
S D:SO4129 3.9 63.4 1.0
NE2 D:GLN17 4.0 22.4 1.0
CD D:GLU21 4.3 41.0 1.0
O D:CYS15 4.3 20.9 1.0
OE1 D:GLU21 4.6 37.5 1.0
N D:CYS15 4.8 26.1 1.0
N D:ASP14 4.9 35.3 1.0

Reference:

Q.J.Florence, C.-K.Wu, J.E.Habel, J.T.Swindell Ii, B.C.Wang, J.P.Rose. The Structure of A Hexahestidine-Tagged Form of Augmenter of Liver Regeneration Reveals A Novel Cd(2)Cl(4)O(6) Cluster That Aids in Crystal Packing To Be Published.
Page generated: Sun Jul 21 03:30:07 2024

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