Atomistry » Chlorine » PDB 3rml-3rup » 3rmq
Atomistry »
  Chlorine »
    PDB 3rml-3rup »
      3rmq »

Chlorine in PDB 3rmq: Crystal Structure of Uncharacterized Protein SVIR_20580 From Saccharomonospora Viridis (V71M Mutant)

Protein crystallography data

The structure of Crystal Structure of Uncharacterized Protein SVIR_20580 From Saccharomonospora Viridis (V71M Mutant), PDB code: 3rmq was solved by K.Michalska, A.Weger, C.Hatzos-Skintges, J.Bearden, A.Joachimiak, Midwestcenter For Structural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 25.93 / 1.85
Space group P 61
Cell size a, b, c (Å), α, β, γ (°) 79.225, 79.225, 47.051, 90.00, 90.00, 120.00
R / Rfree (%) 16.2 / 19.1

Other elements in 3rmq:

The structure of Crystal Structure of Uncharacterized Protein SVIR_20580 From Saccharomonospora Viridis (V71M Mutant) also contains other interesting chemical elements:

Zinc (Zn) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Uncharacterized Protein SVIR_20580 From Saccharomonospora Viridis (V71M Mutant) (pdb code 3rmq). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 7 binding sites of Chlorine where determined in the Crystal Structure of Uncharacterized Protein SVIR_20580 From Saccharomonospora Viridis (V71M Mutant), PDB code: 3rmq:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6; 7;

Chlorine binding site 1 out of 7 in 3rmq

Go back to Chlorine Binding Sites List in 3rmq
Chlorine binding site 1 out of 7 in the Crystal Structure of Uncharacterized Protein SVIR_20580 From Saccharomonospora Viridis (V71M Mutant)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Uncharacterized Protein SVIR_20580 From Saccharomonospora Viridis (V71M Mutant) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl116

b:24.4
occ:1.00
NH2 A:ARG43 3.2 30.4 1.0
NE A:ARG43 3.4 20.7 1.0
O A:HOH166 3.5 34.4 1.0
O A:HOH198 3.5 34.9 1.0
CZ A:ARG43 3.8 30.1 1.0
CD A:ARG43 4.6 16.5 1.0
CG A:ARG43 4.7 18.1 1.0

Chlorine binding site 2 out of 7 in 3rmq

Go back to Chlorine Binding Sites List in 3rmq
Chlorine binding site 2 out of 7 in the Crystal Structure of Uncharacterized Protein SVIR_20580 From Saccharomonospora Viridis (V71M Mutant)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Uncharacterized Protein SVIR_20580 From Saccharomonospora Viridis (V71M Mutant) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl117

b:31.0
occ:1.00
OG1 A:THR30 3.2 24.8 1.0
N A:THR30 3.6 18.2 1.0
CA A:PHE29 3.7 19.0 1.0
C A:PHE29 3.7 21.2 1.0
CE1 A:HIS21 3.8 27.1 1.0
O A:PRO28 4.0 21.7 1.0
CG2 A:THR36 4.0 30.4 1.0
C A:PRO28 4.1 27.8 1.0
N A:PHE29 4.2 23.2 1.0
CB A:THR30 4.2 23.4 1.0
ND1 A:HIS21 4.3 27.7 1.0
O A:PHE29 4.3 19.4 1.0
CA A:THR30 4.4 16.4 1.0
CB A:PRO28 4.5 32.5 1.0
OG1 A:THR36 4.6 29.4 1.0
CG A:PRO28 4.7 37.0 1.0
NE2 A:HIS21 4.8 26.3 1.0
CB A:THR36 4.9 28.4 1.0
CB A:PHE29 5.0 16.2 1.0

Chlorine binding site 3 out of 7 in 3rmq

Go back to Chlorine Binding Sites List in 3rmq
Chlorine binding site 3 out of 7 in the Crystal Structure of Uncharacterized Protein SVIR_20580 From Saccharomonospora Viridis (V71M Mutant)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Uncharacterized Protein SVIR_20580 From Saccharomonospora Viridis (V71M Mutant) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl118

b:41.2
occ:1.00
O A:HOH142 2.9 28.0 1.0
NH1 A:ARG22 3.4 57.2 1.0
SE A:MSE1 4.2 34.2 0.6
CZ A:ARG22 4.3 58.5 1.0
NE A:ARG22 4.4 54.8 1.0
O A:HOH134 4.8 25.8 1.0

Chlorine binding site 4 out of 7 in 3rmq

Go back to Chlorine Binding Sites List in 3rmq
Chlorine binding site 4 out of 7 in the Crystal Structure of Uncharacterized Protein SVIR_20580 From Saccharomonospora Viridis (V71M Mutant)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of Uncharacterized Protein SVIR_20580 From Saccharomonospora Viridis (V71M Mutant) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl119

b:36.6
occ:1.00
O A:HOH192 3.0 38.0 1.0
N A:THR38 3.1 19.5 1.0
O A:THR38 3.6 23.0 1.0
CB A:ASP10 3.7 28.4 1.0
NH1 A:ARG43 3.7 19.8 1.0
CG A:ASP10 3.8 42.7 1.0
CA A:VAL37 3.9 18.7 1.0
C A:VAL37 4.0 19.5 1.0
O A:HOH132 4.0 17.2 1.0
CA A:THR38 4.0 20.5 1.0
OD1 A:ASP10 4.1 39.2 1.0
CB A:THR38 4.1 33.6 1.0
CB A:VAL37 4.2 19.0 1.0
C A:THR38 4.2 20.9 1.0
O A:HOH139 4.3 32.5 1.0
CA A:ASP10 4.3 19.3 1.0
OD2 A:ASP10 4.3 48.7 1.0
N A:ASP10 4.5 15.9 1.0
OG1 A:THR38 4.6 33.4 1.0
CG1 A:VAL37 4.7 22.9 1.0
CZ A:ARG43 4.9 30.1 1.0

Chlorine binding site 5 out of 7 in 3rmq

Go back to Chlorine Binding Sites List in 3rmq
Chlorine binding site 5 out of 7 in the Crystal Structure of Uncharacterized Protein SVIR_20580 From Saccharomonospora Viridis (V71M Mutant)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of Uncharacterized Protein SVIR_20580 From Saccharomonospora Viridis (V71M Mutant) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl120

b:29.6
occ:1.00
N A:LEU46 3.1 15.6 1.0
N A:THR47 3.3 18.7 1.0
OG1 A:THR47 3.5 33.8 1.0
C A:LEU46 3.5 25.4 1.0
O A:THR41 3.5 17.0 1.0
CA A:LEU46 3.5 20.8 1.0
C A:GLY44 3.6 14.8 1.0
O A:HOH137 3.6 21.5 1.0
CG2 A:THR41 3.6 24.7 1.0
CB A:LEU46 3.7 24.5 1.0
CA A:GLY44 3.7 16.1 1.0
CA A:THR41 3.8 18.6 1.0
O A:GLY44 3.8 14.5 1.0
N A:ASP45 3.8 14.6 1.0
CB A:THR47 4.0 32.5 1.0
C A:THR41 4.1 18.2 1.0
C A:ASP45 4.2 13.6 1.0
CB A:THR41 4.2 23.8 1.0
O A:LEU46 4.3 26.3 1.0
CA A:THR47 4.3 21.2 1.0
N A:GLY44 4.4 15.2 1.0
OG1 A:THR41 4.5 23.4 1.0
CA A:ASP45 4.6 13.3 1.0
CD2 A:LEU46 4.6 24.6 1.0
CG A:LEU46 4.8 25.0 1.0
O A:GLN40 4.8 14.7 0.5
O A:GLN40 4.9 14.3 0.5
N A:THR41 4.9 16.6 1.0
CD1 A:LEU50 5.0 34.8 1.0

Chlorine binding site 6 out of 7 in 3rmq

Go back to Chlorine Binding Sites List in 3rmq
Chlorine binding site 6 out of 7 in the Crystal Structure of Uncharacterized Protein SVIR_20580 From Saccharomonospora Viridis (V71M Mutant)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Crystal Structure of Uncharacterized Protein SVIR_20580 From Saccharomonospora Viridis (V71M Mutant) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl121

b:49.5
occ:1.00
O A:HOH148 3.0 31.5 1.0
N A:ASP82 3.2 35.4 1.0
CA A:PHE81 3.7 29.2 1.0
CD1 A:PHE81 3.7 28.6 1.0
CB A:PHE81 3.9 25.6 1.0
C A:PHE81 4.0 36.0 1.0
CB A:ASP82 4.2 45.2 1.0
CA A:ASP82 4.2 39.8 1.0
O A:ASP82 4.3 44.8 1.0
CG A:PHE81 4.3 24.3 1.0
CG A:ASP82 4.3 51.4 1.0
OD2 A:ASP82 4.4 53.4 1.0
CG A:PRO57 4.4 26.0 1.0
C A:ASP82 4.8 37.0 1.0
O A:ARG80 4.8 44.8 1.0
CE1 A:PHE81 4.8 31.0 1.0
OD1 A:ASP82 4.9 50.0 1.0

Chlorine binding site 7 out of 7 in 3rmq

Go back to Chlorine Binding Sites List in 3rmq
Chlorine binding site 7 out of 7 in the Crystal Structure of Uncharacterized Protein SVIR_20580 From Saccharomonospora Viridis (V71M Mutant)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 7 of Crystal Structure of Uncharacterized Protein SVIR_20580 From Saccharomonospora Viridis (V71M Mutant) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl122

b:42.5
occ:1.00
NH1 A:ARG3 3.2 21.9 1.0
CD A:ARG3 3.7 22.0 1.0
CG A:ARG3 3.8 20.9 1.0
O A:HOH195 3.9 42.4 1.0
CB A:ARG3 3.9 16.9 1.0
CZ A:ARG3 4.2 18.9 1.0
O A:HOH176 4.4 41.4 1.0
NE A:ARG3 4.4 19.4 1.0

Reference:

K.Michalska, A.Weger, C.Hatzos-Skintges, J.Bearden, A.Joachimiak. Crystal Structure of Uncharacterized Protein SVIR_20580 From Saccharomonospora Viridis (V71M Mutant) To Be Published.
Page generated: Sat Dec 12 10:07:33 2020

Last articles

Zn in 7VD8
Zn in 7V1R
Zn in 7V1Q
Zn in 7VPF
Zn in 7T85
Zn in 7T5F
Zn in 7NF9
Zn in 7M4M
Zn in 7M4O
Zn in 7M4N
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy