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Chlorine in PDB 3rra: Crystal Structure of Enolase PRK14017 (Target Efi-500653) From Ralstonia Pickettii 12J with Magnesium Bound

Enzymatic activity of Crystal Structure of Enolase PRK14017 (Target Efi-500653) From Ralstonia Pickettii 12J with Magnesium Bound

All present enzymatic activity of Crystal Structure of Enolase PRK14017 (Target Efi-500653) From Ralstonia Pickettii 12J with Magnesium Bound:
4.2.1.6;

Protein crystallography data

The structure of Crystal Structure of Enolase PRK14017 (Target Efi-500653) From Ralstonia Pickettii 12J with Magnesium Bound, PDB code: 3rra was solved by Y.Patskovsky, U.A.Ramagopal, B.Hillerich, R.D.Seidel, W.D.Zencheck, R.Toro, H.J.Imker, J.A.Gerlt, S.C.Almo, Enzyme Function Initiative (Efi), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.30
Space group I 4
Cell size a, b, c (Å), α, β, γ (°) 117.339, 117.339, 113.685, 90.00, 90.00, 90.00
R / Rfree (%) 20.6 / 26.3

Other elements in 3rra:

The structure of Crystal Structure of Enolase PRK14017 (Target Efi-500653) From Ralstonia Pickettii 12J with Magnesium Bound also contains other interesting chemical elements:

Magnesium (Mg) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Enolase PRK14017 (Target Efi-500653) From Ralstonia Pickettii 12J with Magnesium Bound (pdb code 3rra). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Enolase PRK14017 (Target Efi-500653) From Ralstonia Pickettii 12J with Magnesium Bound, PDB code: 3rra:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3rra

Go back to Chlorine Binding Sites List in 3rra
Chlorine binding site 1 out of 2 in the Crystal Structure of Enolase PRK14017 (Target Efi-500653) From Ralstonia Pickettii 12J with Magnesium Bound


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Enolase PRK14017 (Target Efi-500653) From Ralstonia Pickettii 12J with Magnesium Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl405

b:68.6
occ:1.00
 N A:GLY76 3.0 54.5 1.0
CL B:CL405 3.0 72.6 1.0
N A:LEU79 3.2 54.6 1.0
N A:ILE78 3.5 49.9 1.0
CA A:GLY76 3.5 62.7 1.0
C A:GLY76 3.5 62.2 1.0
CG A:LEU79 3.6 48.4 1.0
CB A:ILE78 3.7 45.8 1.0
CG1 B:ILE78 3.7 48.4 1.0
CD1 A:LEU79 3.8 40.9 1.0
CB A:LEU79 3.8 46.0 1.0
O A:GLY76 3.8 60.2 1.0
CD B:PRO77 3.9 57.3 1.0
CG B:PRO77 3.9 65.9 1.0
CA A:ILE78 3.9 50.3 1.0
N A:PRO77 3.9 58.2 1.0
C A:ILE78 4.1 58.1 1.0
CB B:ILE78 4.1 51.7 1.0
C A:GLY75 4.1 52.2 1.0
CA A:LEU79 4.1 51.9 1.0
N B:ILE78 4.1 55.0 1.0
CA A:GLY75 4.3 61.3 1.0
CG1 A:ILE78 4.4 61.5 1.0
N B:PRO77 4.4 62.2 1.0
CD A:PRO77 4.4 56.3 1.0
C A:PRO77 4.5 56.2 1.0
CA B:ILE78 4.8 48.4 1.0
CA A:PRO77 4.8 52.8 1.0
CA B:GLY76 4.8 62.1 1.0
C B:GLY76 4.8 60.5 1.0
CG2 A:ILE78 4.8 46.4 1.0
CG A:PRO77 5.0 65.0 1.0
CD2 A:LEU79 5.0 35.1 1.0

Chlorine binding site 2 out of 2 in 3rra

Go back to Chlorine Binding Sites List in 3rra
Chlorine binding site 2 out of 2 in the Crystal Structure of Enolase PRK14017 (Target Efi-500653) From Ralstonia Pickettii 12J with Magnesium Bound


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Enolase PRK14017 (Target Efi-500653) From Ralstonia Pickettii 12J with Magnesium Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl405

b:72.6
occ:1.00
 O B:GLY75 3.0 60.1 1.0
CL A:CL405 3.0 68.6 1.0
N B:LEU79 3.1 54.3 1.0
N B:ILE78 3.3 55.0 1.0
C B:GLY76 3.4 60.5 1.0
CA B:GLY76 3.5 62.1 1.0
CB B:ILE78 3.5 51.7 1.0
CG B:LEU79 3.6 50.1 1.0
O B:GLY76 3.7 59.4 1.0
CA B:ILE78 3.7 48.4 1.0
CB B:LEU79 3.8 49.2 1.0
CD1 B:LEU79 3.8 47.8 1.0
CG1 A:ILE78 3.8 61.5 1.0
CG A:PRO77 3.8 65.0 1.0
N B:PRO77 3.9 62.2 1.0
C B:GLY75 3.9 57.7 1.0
C B:ILE78 3.9 54.0 1.0
CD A:PRO77 4.0 56.3 1.0
CA B:LEU79 4.0 48.1 1.0
N B:GLY76 4.2 58.9 1.0
N A:ILE78 4.3 49.9 1.0
CB A:ILE78 4.3 45.8 1.0
CD B:PRO77 4.3 57.3 1.0
CG1 B:ILE78 4.4 48.4 1.0
C B:PRO77 4.4 59.3 1.0
N A:PRO77 4.4 58.2 1.0
CG2 B:ILE78 4.6 41.1 1.0
CA B:PRO77 4.7 58.2 1.0
CA A:GLY76 4.8 62.7 1.0
C A:GLY76 4.9 62.2 1.0
CG B:PRO77 4.9 65.9 1.0
CB A:PRO77 4.9 55.1 1.0
CA A:ILE78 4.9 50.3 1.0
CD2 B:LEU79 4.9 59.7 1.0

Reference:

Y.Patskovsky, U.A.Ramagopal, B.Hillerich, R.D.Seidel, W.D.Zencheck, R.Toro, H.J.Imker, J.A.Gerlt, S.C.Almo. Crystal Structure of Enolase PRK14017 From Ralstonia Pickettii To Be Published.
Page generated: Sun Jul 21 03:55:22 2024

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