Atomistry » Chlorine » PDB 3s8n-3sei » 3sds
Atomistry »
  Chlorine »
    PDB 3s8n-3sei »
      3sds »

Chlorine in PDB 3sds: Crystal Structure of A Mitochondrial Ornithine Carbamoyltransferase From Coccidioides Immitis

Enzymatic activity of Crystal Structure of A Mitochondrial Ornithine Carbamoyltransferase From Coccidioides Immitis

All present enzymatic activity of Crystal Structure of A Mitochondrial Ornithine Carbamoyltransferase From Coccidioides Immitis:
2.1.3.3;

Protein crystallography data

The structure of Crystal Structure of A Mitochondrial Ornithine Carbamoyltransferase From Coccidioides Immitis, PDB code: 3sds was solved by T.E.Edwards, J.Abendroth, Seattle Structural Genomics Center Forinfectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.80
Space group P 3 2 1
Cell size a, b, c (Å), α, β, γ (°) 150.360, 150.360, 92.110, 90.00, 90.00, 120.00
R / Rfree (%) 19.3 / 23.9

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A Mitochondrial Ornithine Carbamoyltransferase From Coccidioides Immitis (pdb code 3sds). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 6 binding sites of Chlorine where determined in the Crystal Structure of A Mitochondrial Ornithine Carbamoyltransferase From Coccidioides Immitis, PDB code: 3sds:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6;

Chlorine binding site 1 out of 6 in 3sds

Go back to Chlorine Binding Sites List in 3sds
Chlorine binding site 1 out of 6 in the Crystal Structure of A Mitochondrial Ornithine Carbamoyltransferase From Coccidioides Immitis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Mitochondrial Ornithine Carbamoyltransferase From Coccidioides Immitis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl350

b:78.7
occ:1.00
 N A:LYS96 3.5 59.7 1.0
N A:ARG72 3.6 57.4 1.0
C A:LYS71 3.7 56.6 1.0
CA A:ARG72 3.7 56.5 1.0
O A:LYS71 3.7 55.3 1.0
CA A:GLY95 3.9 54.4 1.0
CG A:LYS96 3.9 65.8 1.0
O A:PHE69 3.9 54.5 1.0
CZ A:PHE93 4.2 47.2 1.0
C A:GLY95 4.2 57.4 1.0
CB A:PHE69 4.3 49.9 1.0
CB A:LYS96 4.3 63.3 1.0
CA A:LYS71 4.5 57.7 1.0
C A:PHE69 4.5 52.9 1.0
CA A:LYS96 4.5 62.9 1.0
NZ A:LYS96 4.5 72.5 1.0
CB A:ARG72 4.6 57.3 1.0
N A:LYS71 4.6 56.8 1.0
CE1 A:PHE93 4.7 47.0 1.0
C A:ARG72 4.7 55.0 1.0
C A:SER70 4.9 57.7 1.0
N A:SER73 4.9 53.8 1.0

Chlorine binding site 2 out of 6 in 3sds

Go back to Chlorine Binding Sites List in 3sds
Chlorine binding site 2 out of 6 in the Crystal Structure of A Mitochondrial Ornithine Carbamoyltransferase From Coccidioides Immitis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A Mitochondrial Ornithine Carbamoyltransferase From Coccidioides Immitis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl351

b:71.9
occ:0.33
 ND1 A:HIS90 3.1 41.0 1.0
CE1 A:HIS90 3.8 42.6 1.0
CG A:HIS90 4.2 40.7 1.0
CB A:HIS90 4.6 39.2 1.0
NE2 A:HIS90 5.0 42.2 1.0

Chlorine binding site 3 out of 6 in 3sds

Go back to Chlorine Binding Sites List in 3sds
Chlorine binding site 3 out of 6 in the Crystal Structure of A Mitochondrial Ornithine Carbamoyltransferase From Coccidioides Immitis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of A Mitochondrial Ornithine Carbamoyltransferase From Coccidioides Immitis within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl350

b:66.3
occ:1.00
 N B:LYS96 3.6 59.3 1.0
CG B:LYS96 3.7 63.9 1.0
CZ B:PHE93 3.9 47.3 1.0
CA B:ARG72 3.9 56.3 1.0
CA B:GLY95 3.9 54.1 1.0
N B:ARG72 4.0 57.2 1.0
C B:LYS71 4.1 56.5 1.0
O B:LYS71 4.1 55.1 1.0
O B:PHE69 4.2 54.4 1.0
C B:GLY95 4.2 57.4 1.0
CD B:LYS96 4.4 65.4 1.0
CB B:LYS96 4.4 63.4 1.0
CE1 B:PHE93 4.5 47.4 1.0
CA B:LYS96 4.6 62.6 1.0
CB B:ARG72 4.7 57.0 1.0
CB B:PHE69 4.7 50.8 1.0
C B:PHE69 4.9 53.3 1.0
CE B:LYS96 4.9 67.0 1.0
CA B:LYS71 5.0 57.7 1.0
CE2 B:PHE93 5.0 47.8 1.0

Chlorine binding site 4 out of 6 in 3sds

Go back to Chlorine Binding Sites List in 3sds
Chlorine binding site 4 out of 6 in the Crystal Structure of A Mitochondrial Ornithine Carbamoyltransferase From Coccidioides Immitis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of A Mitochondrial Ornithine Carbamoyltransferase From Coccidioides Immitis within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl351

b:65.7
occ:0.33
 ND1 B:HIS90 4.1 41.7 1.0
CE1 B:HIS90 4.8 43.2 1.0

Chlorine binding site 5 out of 6 in 3sds

Go back to Chlorine Binding Sites List in 3sds
Chlorine binding site 5 out of 6 in the Crystal Structure of A Mitochondrial Ornithine Carbamoyltransferase From Coccidioides Immitis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of A Mitochondrial Ornithine Carbamoyltransferase From Coccidioides Immitis within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl350

b:54.8
occ:1.00
 N C:LYS96 3.2 62.0 1.0
O C:LYS71 3.6 58.2 1.0
C C:LYS71 3.7 59.7 1.0
CB C:LYS96 3.7 66.4 1.0
N C:ARG72 3.7 60.0 1.0
CA C:ARG72 3.8 58.7 1.0
CA C:LYS96 4.0 65.5 1.0
CA C:GLY95 4.0 56.2 1.0
O C:PHE69 4.1 56.8 1.0
C C:GLY95 4.1 59.6 1.0
CZ C:PHE93 4.2 47.5 1.0
CB C:PHE69 4.4 52.6 1.0
CA C:LYS71 4.4 61.5 1.0
CB C:ARG72 4.6 59.8 1.0
N C:LYS71 4.6 60.4 1.0
C C:PHE69 4.7 55.7 1.0
CE1 C:PHE93 4.8 46.5 1.0
C C:ARG72 4.9 57.4 1.0
C C:SER70 4.9 61.6 1.0

Chlorine binding site 6 out of 6 in 3sds

Go back to Chlorine Binding Sites List in 3sds
Chlorine binding site 6 out of 6 in the Crystal Structure of A Mitochondrial Ornithine Carbamoyltransferase From Coccidioides Immitis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Crystal Structure of A Mitochondrial Ornithine Carbamoyltransferase From Coccidioides Immitis within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl351

b:65.0
occ:0.33
 ND1 C:HIS90 3.4 42.4 1.0
CE1 C:HIS90 4.2 42.9 1.0
CG C:HIS90 4.5 40.9 1.0
CB C:HIS90 4.7 39.8 1.0
CA C:HIS90 5.0 38.9 1.0

Reference:

S.N.Hewitt, R.Choi, A.Kelley, G.J.Crowther, A.J.Napuli, W.C.Van Voorhis. Expression of Proteins in Escherichia Coli As Fusions with Maltose-Binding Protein to Rescue Non-Expressed Targets in A High-Throughput Protein-Expression and Purification Pipeline. Acta Crystallogr.,Sect.F V. 67 1006 2011.
ISSN: ESSN 1744-3091
PubMed: 21904041
DOI: 10.1107/S1744309111022159
Page generated: Sat Dec 12 10:09:35 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy