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Chlorine in PDB 3sh6: Frog M-Ferritin, D122R Mutant, with Magnesium

Enzymatic activity of Frog M-Ferritin, D122R Mutant, with Magnesium

All present enzymatic activity of Frog M-Ferritin, D122R Mutant, with Magnesium:
1.16.3.1;

Protein crystallography data

The structure of Frog M-Ferritin, D122R Mutant, with Magnesium, PDB code: 3sh6 was solved by T.Tosha, H.L.Ng, T.Alber, E.C.Theil, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 52.93 / 1.40
Space group F 4 3 2
Cell size a, b, c (Å), α, β, γ (°) 183.374, 183.374, 183.374, 90.00, 90.00, 90.00
R / Rfree (%) 16.6 / 19.2

Other elements in 3sh6:

The structure of Frog M-Ferritin, D122R Mutant, with Magnesium also contains other interesting chemical elements:

Magnesium (Mg) 7 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Frog M-Ferritin, D122R Mutant, with Magnesium (pdb code 3sh6). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Frog M-Ferritin, D122R Mutant, with Magnesium, PDB code: 3sh6:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 3sh6

Go back to Chlorine Binding Sites List in 3sh6
Chlorine binding site 1 out of 3 in the Frog M-Ferritin, D122R Mutant, with Magnesium


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Frog M-Ferritin, D122R Mutant, with Magnesium within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl181

b:11.2
occ:0.25
NE2 A:HIS169 3.2 13.3 1.0
CD2 A:LEU165 3.9 13.5 1.0
CE1 A:HIS169 4.0 15.2 1.0
CD2 A:HIS169 4.3 11.8 1.0
CL A:CL182 4.9 18.0 0.2

Chlorine binding site 2 out of 3 in 3sh6

Go back to Chlorine Binding Sites List in 3sh6
Chlorine binding site 2 out of 3 in the Frog M-Ferritin, D122R Mutant, with Magnesium


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Frog M-Ferritin, D122R Mutant, with Magnesium within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl182

b:18.0
occ:0.25
CE1 A:HIS169 3.8 15.2 1.0
NE2 A:HIS169 4.6 13.3 1.0
ND1 A:HIS169 4.7 14.3 1.0
CL A:CL181 4.9 11.2 0.2

Chlorine binding site 3 out of 3 in 3sh6

Go back to Chlorine Binding Sites List in 3sh6
Chlorine binding site 3 out of 3 in the Frog M-Ferritin, D122R Mutant, with Magnesium


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Frog M-Ferritin, D122R Mutant, with Magnesium within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl183

b:24.6
occ:1.00
O A:HOH312 2.7 36.2 1.0
N A:ASP87 3.1 13.2 1.0
N A:GLU88 3.7 12.0 1.0
CA A:ARG86 3.7 13.4 1.0
CB A:ARG86 3.8 13.3 1.0
CA A:ASP87 3.9 14.0 1.0
C A:ARG86 4.0 12.3 1.0
CB A:ASP87 4.0 14.0 1.0
O A:GLU88 4.1 14.0 1.0
CG A:GLU88 4.1 17.2 1.0
CG A:ARG86 4.2 14.2 1.0
C A:ASP87 4.3 12.4 1.0
O A:HOH310 4.5 37.1 1.0
OE2 A:GLU88 4.6 28.9 1.0
OD2 A:ASP87 4.6 23.1 1.0
CA A:GLU88 4.6 13.1 1.0
CG A:ASP87 4.6 14.4 1.0
NE A:ARG86 4.6 20.4 1.0
CB A:GLU88 4.7 16.6 1.0
C A:GLU88 4.8 11.6 1.0

Reference:

T.Tosha, H.L.Ng, T.Alber, E.C.Theil. Frog M-Ferritin, D122R Mutant, with Magnesium To Be Published.
Page generated: Sat Dec 12 10:09:57 2020

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