Atomistry » Chlorine » PDB 3smc-3stc » 3sn1
Atomistry »
  Chlorine »
    PDB 3smc-3stc »
      3sn1 »

Chlorine in PDB 3sn1: Crystal Structure of Putative L-Alanine-Dl-Glutamate Epimerase From Burkholderia Xenovorans Strain LB400 Bound to Magnesium and Tartrate

Protein crystallography data

The structure of Crystal Structure of Putative L-Alanine-Dl-Glutamate Epimerase From Burkholderia Xenovorans Strain LB400 Bound to Magnesium and Tartrate, PDB code: 3sn1 was solved by J.B.Bonanno, Y.Patskovsky, R.Toro, M.Dickey, K.T.Bain, B.Wu, J.M.Sauder, S.K.Burley, S.C.Almo, New York Sgx Research Center For Structuralgenomics (Nysgxrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.80
Space group I 4 2 2
Cell size a, b, c (Å), α, β, γ (°) 104.932, 104.932, 145.145, 90.00, 90.00, 90.00
R / Rfree (%) 14.1 / 16.5

Other elements in 3sn1:

The structure of Crystal Structure of Putative L-Alanine-Dl-Glutamate Epimerase From Burkholderia Xenovorans Strain LB400 Bound to Magnesium and Tartrate also contains other interesting chemical elements:

Magnesium (Mg) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Putative L-Alanine-Dl-Glutamate Epimerase From Burkholderia Xenovorans Strain LB400 Bound to Magnesium and Tartrate (pdb code 3sn1). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Putative L-Alanine-Dl-Glutamate Epimerase From Burkholderia Xenovorans Strain LB400 Bound to Magnesium and Tartrate, PDB code: 3sn1:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3sn1

Go back to Chlorine Binding Sites List in 3sn1
Chlorine binding site 1 out of 2 in the Crystal Structure of Putative L-Alanine-Dl-Glutamate Epimerase From Burkholderia Xenovorans Strain LB400 Bound to Magnesium and Tartrate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Putative L-Alanine-Dl-Glutamate Epimerase From Burkholderia Xenovorans Strain LB400 Bound to Magnesium and Tartrate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl502

b:19.7
occ:1.00
O A:HOH537 3.1 21.2 1.0
O A:HOH413 3.2 18.9 1.0
N A:ASN17 3.2 17.2 1.0
N A:GLY391 3.2 22.7 1.0
CA A:GLY38 3.5 19.9 1.0
CA A:ARG16 3.7 17.6 1.0
N A:GLY38 3.8 19.7 1.0
CG A:MSE390 3.8 27.4 1.0
CB A:ARG16 3.8 17.0 1.0
C A:GLY391 3.9 21.5 1.0
C A:ARG16 3.9 17.6 1.0
CA A:GLY391 4.0 22.1 1.0
CA A:MSE390 4.0 23.9 1.0
C A:MSE390 4.1 23.3 1.0
O A:GLY391 4.1 21.2 1.0
ND2 A:ASN17 4.2 18.3 1.0
CA A:ASN17 4.2 17.2 1.0
O A:ASN17 4.3 16.7 1.0
CB A:ASN17 4.3 17.5 1.0
N A:GLY392 4.3 20.8 1.0
O A:HOH416 4.5 30.3 1.0
CB A:MSE390 4.5 24.9 1.0
CG A:ASN17 4.5 17.6 1.0
C A:GLU37 4.6 19.1 1.0
C A:ASN17 4.7 16.5 1.0
CA A:GLY392 4.9 21.1 1.0
C A:GLY38 5.0 19.2 1.0

Chlorine binding site 2 out of 2 in 3sn1

Go back to Chlorine Binding Sites List in 3sn1
Chlorine binding site 2 out of 2 in the Crystal Structure of Putative L-Alanine-Dl-Glutamate Epimerase From Burkholderia Xenovorans Strain LB400 Bound to Magnesium and Tartrate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Putative L-Alanine-Dl-Glutamate Epimerase From Burkholderia Xenovorans Strain LB400 Bound to Magnesium and Tartrate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl504

b:18.0
occ:1.00
O A:HOH734 3.2 20.8 1.0
N A:ALA186 3.2 15.1 1.0
O A:HOH484 3.3 15.8 1.0
C A:GLN184 3.3 17.4 1.0
N A:PRO185 3.4 16.8 1.0
CA A:GLN184 3.5 19.3 1.0
CB A:ALA186 3.5 15.0 1.0
CD A:PRO185 3.5 18.1 1.0
CB A:GLN184 3.8 20.4 1.0
O A:GLN184 3.8 17.1 1.0
CA A:ALA186 4.0 14.9 1.0
C A:PRO185 4.2 15.0 1.0
CA A:PRO185 4.4 16.1 1.0
CG A:PRO185 4.4 17.6 1.0
NE2 A:GLN184 4.7 37.2 1.0
O A:HOH494 4.7 31.1 1.0
N A:LEU187 4.7 14.2 1.0
O A:HOH628 4.8 29.2 1.0
C A:ALA186 4.8 14.7 1.0
CG A:GLN184 4.9 25.7 1.0
N A:GLN184 4.9 18.4 1.0
ND2 A:ASN188 5.0 13.2 1.0

Reference:

J.B.Bonanno, Y.Patskovsky, R.Toro, M.Dickey, K.T.Bain, B.Wu, J.M.Sauder, S.K.Burley, S.C.Almo. Crystal Structure of Putative L-Alanine-Dl-Glutamate Epimerase From Burkholderia Xenovorans Strain LB400 Bound to Magnesium and Tartrate To Be Published.
Page generated: Sat Dec 12 10:10:26 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy