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Chlorine in PDB 3ti9: Crystal Structure of the Basic Protease Bprb From the Ovine Footrot Pathogen, Dichelobacter Nodosus

Protein crystallography data

The structure of Crystal Structure of the Basic Protease Bprb From the Ovine Footrot Pathogen, Dichelobacter Nodosus, PDB code: 3ti9 was solved by W.Wong, J.C.Whisstock, C.J.Porter, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.38 / 1.80
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 38.462, 90.514, 44.060, 90.00, 109.99, 90.00
R / Rfree (%) 15.7 / 20.7

Other elements in 3ti9:

The structure of Crystal Structure of the Basic Protease Bprb From the Ovine Footrot Pathogen, Dichelobacter Nodosus also contains other interesting chemical elements:

Calcium (Ca) 3 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the Basic Protease Bprb From the Ovine Footrot Pathogen, Dichelobacter Nodosus (pdb code 3ti9). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of the Basic Protease Bprb From the Ovine Footrot Pathogen, Dichelobacter Nodosus, PDB code: 3ti9:

Chlorine binding site 1 out of 1 in 3ti9

Go back to Chlorine Binding Sites List in 3ti9
Chlorine binding site 1 out of 1 in the Crystal Structure of the Basic Protease Bprb From the Ovine Footrot Pathogen, Dichelobacter Nodosus


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Basic Protease Bprb From the Ovine Footrot Pathogen, Dichelobacter Nodosus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl357

b:13.1
occ:1.00
N A:GLY162 3.2 11.4 1.0
O A:HOH583 3.2 15.6 1.0
CE1 A:HIS159 3.8 11.4 1.0
O A:HOH597 3.8 29.2 1.0
CA A:ASP161 3.9 11.9 1.0
C A:ASP161 4.0 11.8 1.0
CA A:GLY162 4.1 11.6 1.0
OD1 A:ASP161 4.2 13.9 1.0
NE2 A:HIS159 4.2 15.3 1.0
CB A:ASP161 4.5 12.1 1.0
CG A:ASP161 4.7 16.1 1.0
O A:ILE160 4.8 8.7 1.0
N A:VAL163 4.8 10.6 1.0
C A:GLY162 4.8 11.5 1.0
O A:HOH456 4.9 33.4 1.0
N A:ASP161 5.0 10.3 1.0

Reference:

W.Wong, L.C.Wijeyewickrema, R.M.Kennan, S.B.Reeve, D.L.Steer, C.Reboul, A.I.Smith, R.N.Pike, J.I.Rood, J.C.Whisstock, C.J.Porter. S1 Pocket of A Bacterially Derived Subtilisin-Like Protease Underpins Effective Tissue Destruction. J.Biol.Chem. V. 286 42180 2011.
ISSN: ISSN 0021-9258
PubMed: 21990366
DOI: 10.1074/JBC.M111.298711
Page generated: Sat Dec 12 10:12:15 2020

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