Chlorine in PDB 3tnn: Crystal Structure of N5-I5 Fab, An Adcc Mediating and Non-Neutralizing CD4I Anti-Hiv- 1 Antibody.

The structure of Crystal Structure of N5-I5 Fab, An Adcc Mediating and Non-Neutralizing CD4I Anti-Hiv- 1 Antibody., PDB code: 3tnn was solved by X.Wu, M.Pazgier, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	20.00 / 1.95
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	73.437, 84.505, 143.125, 90.00, 101.08, 90.00
R / Rfree (%)	19.8 / 24.5

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 14;

Binding sites:

The binding sites of Chlorine atom in the Crystal Structure of N5-I5 Fab, An Adcc Mediating and Non-Neutralizing CD4I Anti-Hiv- 1 Antibody. (pdb code 3tnn). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 14 binding sites of Chlorine where determined in the Crystal Structure of N5-I5 Fab, An Adcc Mediating and Non-Neutralizing CD4I Anti-Hiv- 1 Antibody., PDB code: 3tnn:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Chlorine binding site 1 out of 14 in the Crystal Structure of N5-I5 Fab, An Adcc Mediating and Non-Neutralizing CD4I Anti-Hiv- 1 Antibody.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of N5-I5 Fab, An Adcc Mediating and Non-Neutralizing CD4I Anti-Hiv- 1 Antibody. within 5.0Å range: probe atom residue distance (Å) B Occ H:Cl224 b:72.0 occ:1.00 N H:GLY9 3.3 30.0 1.0 OG1 H:THR107 3.4 32.8 1.0 N H:GLY8 3.5 28.4 1.0 O H:HOH481 3.6 46.9 1.0 O H:HOH419 3.7 49.6 1.0 O H:HOH371 3.8 30.8 1.0 CA H:SER7 3.9 27.7 1.0 O H:HOH584 4.0 67.2 1.0 C H:SER7 4.0 27.8 1.0 CA H:GLY9 4.0 30.0 1.0 O H:GLY9 4.1 34.8 1.0 C H:GLY9 4.2 31.9 1.0 C H:GLY8 4.3 30.1 1.0 CA H:GLY8 4.3 28.4 1.0 CB H:SER7 4.5 28.4 1.0 CB H:THR107 4.7 27.0 1.0 O H:HOH240 4.8 36.7 1.0 CD H:LYS201 4.9 49.6 1.0 N H:SER7 5.0 27.5 1.0 O H:GLU6 5.0 27.4 1.0 N H:GLY10 5.0 29.5 1.0

Chlorine binding site 2 out of 14 in the Crystal Structure of N5-I5 Fab, An Adcc Mediating and Non-Neutralizing CD4I Anti-Hiv- 1 Antibody.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of N5-I5 Fab, An Adcc Mediating and Non-Neutralizing CD4I Anti-Hiv- 1 Antibody. within 5.0Å range: probe atom residue distance (Å) B Occ H:Cl225 b:75.6 occ:1.00 N H:ARG210 3.4 44.5 1.0 CD H:LYS209 3.9 50.9 1.0 CB H:ARG210 3.9 46.7 1.0 CA H:LYS209 4.0 44.8 1.0 O H:ASP208 4.1 46.0 1.0 NH1 H:ARG210 4.1 65.5 1.0 C H:LYS209 4.2 44.5 1.0 CA H:ARG210 4.2 45.8 1.0 NZ H:LYS209 4.2 54.0 1.0 O H:ARG210 4.5 44.2 1.0 CE H:LYS209 4.7 53.4 1.0 CB H:LYS209 4.8 44.3 1.0 C H:ARG210 4.8 45.5 1.0 CG H:LYS209 4.9 48.4 1.0 C H:ASP208 4.9 45.4 1.0 N H:LYS209 5.0 44.6 1.0

Chlorine binding site 3 out of 14 in the Crystal Structure of N5-I5 Fab, An Adcc Mediating and Non-Neutralizing CD4I Anti-Hiv- 1 Antibody.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of N5-I5 Fab, An Adcc Mediating and Non-Neutralizing CD4I Anti-Hiv- 1 Antibody. within 5.0Å range: probe atom residue distance (Å) B Occ L:Cl216 b:68.0 occ:1.00 O L:HOH248 3.5 41.1 1.0 N L:GLY68 3.7 32.1 1.0 CA L:SER67 4.4 32.3 1.0 CA L:GLY68 4.4 31.8 1.0 C L:SER67 4.5 31.7 1.0 O L:LYS66 4.7 30.1 1.0

Chlorine binding site 4 out of 14 in the Crystal Structure of N5-I5 Fab, An Adcc Mediating and Non-Neutralizing CD4I Anti-Hiv- 1 Antibody.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of N5-I5 Fab, An Adcc Mediating and Non-Neutralizing CD4I Anti-Hiv- 1 Antibody. within 5.0Å range: probe atom residue distance (Å) B Occ L:Cl217 b:68.3 occ:1.00 OG1 L:THR70 3.4 30.6 1.0 O L:HOH263 3.7 45.9 1.0 N L:ASN69 3.8 30.7 1.0 CB L:ASN69 4.1 31.5 1.0 N L:THR70 4.1 28.5 1.0 CB L:THR70 4.2 30.5 1.0 CA L:ASN69 4.3 30.4 1.0 C L:ASN69 4.4 29.4 1.0 O L:SER67 4.5 33.5 1.0 CA L:THR70 4.8 29.1 1.0 C L:GLY68 4.9 30.8 1.0 ND2 L:ASN69 5.0 32.7 1.0 CG L:ASN69 5.0 34.3 1.0

Chlorine binding site 5 out of 14 in the Crystal Structure of N5-I5 Fab, An Adcc Mediating and Non-Neutralizing CD4I Anti-Hiv- 1 Antibody.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of N5-I5 Fab, An Adcc Mediating and Non-Neutralizing CD4I Anti-Hiv- 1 Antibody. within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl221 b:66.5 occ:1.00 OG1 A:THR28 3.5 53.7 1.0 N A:THR28 3.7 53.5 1.0 OH A:TYR32 4.0 49.9 1.0 CA A:PHE27 4.3 53.7 1.0 CB A:THR28 4.3 53.4 1.0 CB A:PHE27 4.4 53.0 1.0 C A:PHE27 4.5 54.0 1.0 CE2 A:TYR32 4.6 48.5 1.0 CA A:THR28 4.6 52.8 1.0 CZ A:TYR32 4.8 48.8 1.0

Chlorine binding site 6 out of 14 in the Crystal Structure of N5-I5 Fab, An Adcc Mediating and Non-Neutralizing CD4I Anti-Hiv- 1 Antibody.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Crystal Structure of N5-I5 Fab, An Adcc Mediating and Non-Neutralizing CD4I Anti-Hiv- 1 Antibody. within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl215 b:63.2 occ:1.00 OH B:TYR173 3.5 50.1 1.0 NZ B:LYS167 3.6 48.0 1.0 O B:HOH234 3.6 34.8 1.0 OH B:TYR141 3.9 42.7 1.0 CE1 B:TYR141 4.0 42.7 1.0 CG2 B:THR105 4.2 44.1 1.0 OG1 B:THR105 4.2 42.5 1.0 OE2 B:GLU83 4.4 45.9 1.0 CZ B:TYR141 4.5 43.2 1.0 CZ B:TYR173 4.5 42.5 1.0 CE B:LYS167 4.6 45.9 1.0 CE2 B:TYR173 4.6 38.2 1.0 O B:HOH529 4.7 49.0 1.0 CD B:GLU83 4.8 44.6 1.0 OE1 B:GLU83 4.8 45.5 1.0 CB B:THR105 4.8 41.2 1.0

Chlorine binding site 7 out of 14 in the Crystal Structure of N5-I5 Fab, An Adcc Mediating and Non-Neutralizing CD4I Anti-Hiv- 1 Antibody.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 7 of Crystal Structure of N5-I5 Fab, An Adcc Mediating and Non-Neutralizing CD4I Anti-Hiv- 1 Antibody. within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl216 b:73.1 occ:1.00 O B:HOH496 3.9 55.1 1.0 CE1 B:HIS189 4.1 37.7 1.0 NE2 B:HIS189 4.2 35.4 1.0 NE2 B:GLN185 4.3 40.8 1.0 CG B:GLN185 4.6 36.7 1.0

Chlorine binding site 8 out of 14 in the Crystal Structure of N5-I5 Fab, An Adcc Mediating and Non-Neutralizing CD4I Anti-Hiv- 1 Antibody.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 8 of Crystal Structure of N5-I5 Fab, An Adcc Mediating and Non-Neutralizing CD4I Anti-Hiv- 1 Antibody. within 5.0Å range: probe atom residue distance (Å) B Occ D:Cl1 b:59.9 occ:1.00 N D:LYS157 3.5 43.1 1.0 N D:ALA158 3.5 43.9 1.0 CB D:ALA158 3.9 43.4 1.0 CA D:LYS157 4.2 45.5 1.0 CA D:ALA158 4.3 43.2 1.0 C D:LYS157 4.3 45.3 1.0 CB D:LYS157 4.3 47.2 1.0 C D:VAL156 4.4 41.1 1.0 CA D:VAL156 4.4 40.8 1.0 CG1 D:VAL156 4.5 42.9 1.0

Chlorine binding site 9 out of 14 in the Crystal Structure of N5-I5 Fab, An Adcc Mediating and Non-Neutralizing CD4I Anti-Hiv- 1 Antibody.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 9 of Crystal Structure of N5-I5 Fab, An Adcc Mediating and Non-Neutralizing CD4I Anti-Hiv- 1 Antibody. within 5.0Å range: probe atom residue distance (Å) B Occ D:Cl216 b:86.2 occ:1.00 N D:SER123 3.5 37.9 1.0 OG D:SER123 3.6 43.7 1.0 CB D:SER123 3.9 39.9 1.0 CA D:SER123 4.3 38.4 1.0 CA D:SER122 4.4 37.4 1.0 C D:SER122 4.4 37.4 1.0 OE1 D:GLU124 4.8 60.2 1.0 CB C:ALA125 4.8 49.8 1.0 CB D:SER122 4.8 37.5 1.0 O C:HOH517 4.9 47.6 1.0

Chlorine binding site 10 out of 14 in the Crystal Structure of N5-I5 Fab, An Adcc Mediating and Non-Neutralizing CD4I Anti-Hiv- 1 Antibody.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 10 of Crystal Structure of N5-I5 Fab, An Adcc Mediating and Non-Neutralizing CD4I Anti-Hiv- 1 Antibody. within 5.0Å range: probe atom residue distance (Å) B Occ E:Cl221 b:60.2 occ:1.00 OH E:TYR32 3.5 40.5 1.0 N E:THR28 3.7 34.4 1.0 OG1 E:THR28 3.7 36.7 1.0 CE1 E:TYR32 4.0 33.5 1.0 CB E:PHE27 4.2 33.4 1.0 CZ E:TYR32 4.2 37.3 1.0 CB E:THR28 4.3 34.4 1.0 CA E:PHE27 4.3 33.9 1.0 O E:HOH495 4.5 40.9 1.0 C E:PHE27 4.5 34.0 1.0 CA E:THR28 4.6 34.7 1.0

J.Guan, X.Wu, M.Pazgier, G.Lewis. Crystal Structure of N5-I5 Fab, An Adcc and Non-Neutralizing Anti-Hiv-1 Antibody To Be Published.