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Chlorine in PDB 3tx8: Crystal Structure of A Succinyl-Diaminopimelate Desuccinylase (Arge) From Corynebacterium Glutamicum Atcc 13032 at 2.97 A Resolution

Enzymatic activity of Crystal Structure of A Succinyl-Diaminopimelate Desuccinylase (Arge) From Corynebacterium Glutamicum Atcc 13032 at 2.97 A Resolution

All present enzymatic activity of Crystal Structure of A Succinyl-Diaminopimelate Desuccinylase (Arge) From Corynebacterium Glutamicum Atcc 13032 at 2.97 A Resolution:
3.5.1.18;

Protein crystallography data

The structure of Crystal Structure of A Succinyl-Diaminopimelate Desuccinylase (Arge) From Corynebacterium Glutamicum Atcc 13032 at 2.97 A Resolution, PDB code: 3tx8 was solved by Joint Center For Structural Genomics (Jcsg), A.T.Brunger, T.C.Terwilliger, R.J.Read, P.D.Adams, M.Levitt, G.F.Schroder, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.54 / 2.97
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 82.901, 82.901, 364.175, 90.00, 90.00, 120.00
R / Rfree (%) 23.8 / 25.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A Succinyl-Diaminopimelate Desuccinylase (Arge) From Corynebacterium Glutamicum Atcc 13032 at 2.97 A Resolution (pdb code 3tx8). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of A Succinyl-Diaminopimelate Desuccinylase (Arge) From Corynebacterium Glutamicum Atcc 13032 at 2.97 A Resolution, PDB code: 3tx8:

Chlorine binding site 1 out of 1 in 3tx8

Go back to Chlorine Binding Sites List in 3tx8
Chlorine binding site 1 out of 1 in the Crystal Structure of A Succinyl-Diaminopimelate Desuccinylase (Arge) From Corynebacterium Glutamicum Atcc 13032 at 2.97 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Succinyl-Diaminopimelate Desuccinylase (Arge) From Corynebacterium Glutamicum Atcc 13032 at 2.97 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl402

b:93.2
occ:1.00
 N A:PHE318 3.3 93.2 1.0
N A:GLY319 3.6 93.9 1.0
CD A:LYS317 3.7 92.0 1.0
CB A:PHE318 3.9 92.4 1.0
CA A:PHE318 4.0 91.8 1.0
NH1 A:ARG315 4.0 0.0 1.0
CD2 A:PHE318 4.0 94.3 1.0
CE A:LYS317 4.1 93.6 1.0
NH2 A:ARG315 4.1 0.8 1.0
C A:LYS317 4.2 96.0 1.0
CA A:LYS317 4.2 94.3 1.0
C A:PHE318 4.3 91.3 1.0
CG A:LYS317 4.4 88.6 1.0
CG A:PHE318 4.5 92.9 1.0
NZ A:LYS317 4.5 93.5 1.0
CA A:GLY319 4.5 95.5 1.0
CZ A:ARG315 4.6 0.8 1.0
O A:ALA316 4.7 98.8 1.0
CB A:LYS317 4.9 89.6 1.0
OE1 A:GLU172 4.9 0.6 1.0

Reference:

A.T.Brunger, D.Das, A.M.Deacon, J.Grant, T.C.Terwilliger, R.J.Read, P.D.Adams, M.Levitt, G.F.Schroder. Application of Den Refinement and Automated Model Building to A Difficult Case of Molecular-Replacement Phasing: the Structure of A Putative Succinyl-Diaminopimelate Desuccinylase From Corynebacterium Glutamicum. Acta Crystallogr.,Sect.D V. 68 391 2012.
ISSN: ISSN 0907-4449
PubMed: 22505259
DOI: 10.1107/S090744491104978X
Page generated: Sun Jul 21 05:36:16 2024

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