Atomistry » Chlorine » PDB 3unh-3uwb » 3uq0
Atomistry »
  Chlorine »
    PDB 3unh-3uwb »
      3uq0 »

Chlorine in PDB 3uq0: Crystal Structure of the Post-Catalytic Product Complex of Polymerase Lambda with An Ramp at the Primer Terminus.

Enzymatic activity of Crystal Structure of the Post-Catalytic Product Complex of Polymerase Lambda with An Ramp at the Primer Terminus.

All present enzymatic activity of Crystal Structure of the Post-Catalytic Product Complex of Polymerase Lambda with An Ramp at the Primer Terminus.:
2.7.7.7;

Protein crystallography data

The structure of Crystal Structure of the Post-Catalytic Product Complex of Polymerase Lambda with An Ramp at the Primer Terminus., PDB code: 3uq0 was solved by R.A.Gosavi, A.F.Moon, T.A.Kunkel, L.C.Pedersen, K.Bebenek, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 25.92 / 2.14
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 55.843, 64.241, 139.290, 90.00, 90.00, 90.00
R / Rfree (%) 19.5 / 23.9

Other elements in 3uq0:

The structure of Crystal Structure of the Post-Catalytic Product Complex of Polymerase Lambda with An Ramp at the Primer Terminus. also contains other interesting chemical elements:

Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the Post-Catalytic Product Complex of Polymerase Lambda with An Ramp at the Primer Terminus. (pdb code 3uq0). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of the Post-Catalytic Product Complex of Polymerase Lambda with An Ramp at the Primer Terminus., PDB code: 3uq0:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3uq0

Go back to Chlorine Binding Sites List in 3uq0
Chlorine binding site 1 out of 2 in the Crystal Structure of the Post-Catalytic Product Complex of Polymerase Lambda with An Ramp at the Primer Terminus.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Post-Catalytic Product Complex of Polymerase Lambda with An Ramp at the Primer Terminus. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl5

b:70.2
occ:1.00
O A:HOH198 3.7 38.4 1.0
NH2 A:ARG419 3.7 30.3 1.0
O A:HOH604 3.8 49.2 1.0
NE A:ARG419 3.9 33.0 1.0
CZ A:ARG419 4.2 32.2 1.0
CG A:PRO570 4.2 29.5 1.0
CD A:PRO570 4.6 29.8 1.0
O A:HOH599 4.8 53.5 1.0
CG A:ARG419 5.0 30.9 1.0

Chlorine binding site 2 out of 2 in 3uq0

Go back to Chlorine Binding Sites List in 3uq0
Chlorine binding site 2 out of 2 in the Crystal Structure of the Post-Catalytic Product Complex of Polymerase Lambda with An Ramp at the Primer Terminus.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of the Post-Catalytic Product Complex of Polymerase Lambda with An Ramp at the Primer Terminus. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl6

b:79.0
occ:1.00
NH2 A:ARG275 3.9 61.6 1.0
NH1 A:ARG275 4.2 60.1 1.0
CZ A:ARG275 4.5 66.0 1.0

Reference:

R.A.Gosavi, A.F.Moon, T.A.Kunkel, L.C.Pedersen, K.Bebenek. The Catalytic Cycle For Ribonucleotide Incorporation By Human Dna Pol Lambda Nucleic Acids Res. V. 40 7518 2012.
ISSN: ISSN 0305-1048
PubMed: 22584622
DOI: 10.1093/NAR/GKS413
Page generated: Sun Jul 21 06:23:34 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy