Atomistry » Chlorine » PDB 3unh-3uwb » 3ury
Atomistry »
  Chlorine »
    PDB 3unh-3uwb »
      3ury »

Chlorine in PDB 3ury: Crystal Structure of Superantigen-Like Protein, Exotoxin From Staphylococcus Aureus Subsp. Aureus Nctc 8325

Protein crystallography data

The structure of Crystal Structure of Superantigen-Like Protein, Exotoxin From Staphylococcus Aureus Subsp. Aureus Nctc 8325, PDB code: 3ury was solved by E.V.Filippova, G.Minasov, L.Shuvalova, A.Halavaty, J.Winsor, I.Dubrovska, F.Bagnoli, F.Falugi, M.Bottomley, G.Grandi, W.F.Anderson, Center Forstructural Genomics Of Infectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.68 / 1.90
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 94.734, 79.555, 55.354, 90.00, 103.16, 90.00
R / Rfree (%) 18.8 / 24.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Superantigen-Like Protein, Exotoxin From Staphylococcus Aureus Subsp. Aureus Nctc 8325 (pdb code 3ury). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the Crystal Structure of Superantigen-Like Protein, Exotoxin From Staphylococcus Aureus Subsp. Aureus Nctc 8325, PDB code: 3ury:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in 3ury

Go back to Chlorine Binding Sites List in 3ury
Chlorine binding site 1 out of 4 in the Crystal Structure of Superantigen-Like Protein, Exotoxin From Staphylococcus Aureus Subsp. Aureus Nctc 8325


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Superantigen-Like Protein, Exotoxin From Staphylococcus Aureus Subsp. Aureus Nctc 8325 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1

b:48.4
occ:1.00
ND2 A:ASN205 3.4 43.1 1.0
N B:TYR157 3.5 40.6 1.0
CB B:ASP156 3.6 41.5 1.0
CD1 B:TYR157 3.7 43.9 1.0
CB B:TYR157 3.8 43.8 1.0
CG B:ASP156 4.1 45.9 1.0
O A:LYS207 4.1 48.4 1.0
CB A:ASN205 4.1 47.6 1.0
CG B:TYR157 4.2 45.5 1.0
CA B:TYR157 4.2 42.3 1.0
CG A:ASN205 4.3 46.3 1.0
C B:ASP156 4.5 43.7 1.0
OD2 B:ASP156 4.5 39.8 1.0
CA B:ASP156 4.5 39.8 1.0
CA A:LYS208 4.5 54.8 1.0
CE2 B:PHE158 4.6 55.2 1.0
C A:LYS207 4.6 53.1 1.0
CD2 B:PHE158 4.6 52.2 1.0
OD1 B:ASP156 4.7 40.1 1.0
N A:LYS208 4.8 54.3 1.0
CE1 B:TYR157 4.8 47.1 1.0

Chlorine binding site 2 out of 4 in 3ury

Go back to Chlorine Binding Sites List in 3ury
Chlorine binding site 2 out of 4 in the Crystal Structure of Superantigen-Like Protein, Exotoxin From Staphylococcus Aureus Subsp. Aureus Nctc 8325


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Superantigen-Like Protein, Exotoxin From Staphylococcus Aureus Subsp. Aureus Nctc 8325 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl309

b:57.4
occ:1.00
N A:TYR157 3.2 39.4 1.0
ND2 B:ASN205 3.2 39.6 1.0
O A:HOH329 3.3 51.7 1.0
CB A:ASP156 3.4 46.4 1.0
CB A:TYR157 3.7 45.5 1.0
CD1 A:TYR157 3.8 55.3 1.0
CA A:TYR157 4.0 40.9 1.0
C A:ASP156 4.1 43.0 1.0
CG B:ASN205 4.1 40.8 1.0
CG A:ASP156 4.2 48.0 1.0
CA A:ASP156 4.2 43.6 1.0
CB B:ASN205 4.2 41.5 1.0
CG A:TYR157 4.2 51.1 1.0
CE2 A:PHE158 4.4 50.5 1.0
CD2 A:PHE158 4.4 47.8 1.0
O B:LYS207 4.4 44.5 1.0
OD2 A:ASP156 4.5 50.4 1.0
CA B:LYS208 4.5 50.9 1.0
O B:THR236 4.5 41.4 1.0
C A:TYR157 4.8 43.3 1.0
CB B:LYS208 4.9 54.3 1.0
OD1 A:ASP156 4.9 48.9 1.0
N B:VAL209 4.9 47.4 1.0
CE1 A:TYR157 5.0 56.5 1.0

Chlorine binding site 3 out of 4 in 3ury

Go back to Chlorine Binding Sites List in 3ury
Chlorine binding site 3 out of 4 in the Crystal Structure of Superantigen-Like Protein, Exotoxin From Staphylococcus Aureus Subsp. Aureus Nctc 8325


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Superantigen-Like Protein, Exotoxin From Staphylococcus Aureus Subsp. Aureus Nctc 8325 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl310

b:53.0
occ:1.00
O A:HOH324 2.9 42.4 1.0
NE1 A:TRP145 3.3 50.5 1.0
ND2 A:ASN152 3.4 42.0 1.0
NZ A:LYS161 3.8 45.0 1.0
OD1 A:ASN152 4.0 44.3 1.0
CB A:PHE150 4.1 43.2 1.0
CD1 A:TRP145 4.1 51.9 1.0
CG A:ASN152 4.1 44.4 1.0
CE2 A:TRP145 4.3 51.4 1.0
CD1 A:LEU142 4.3 49.2 1.0
CD A:LYS161 4.3 48.3 1.0
O A:HOH359 4.3 42.5 1.0
CD2 A:PHE150 4.4 46.0 1.0
CE A:LYS161 4.5 54.4 1.0
CB A:LEU142 4.5 48.4 1.0
CG A:PHE150 4.6 42.0 1.0
CZ2 A:TRP145 4.7 52.9 1.0
CG A:LEU142 4.7 48.6 1.0
O A:PHE150 4.8 37.2 1.0

Chlorine binding site 4 out of 4 in 3ury

Go back to Chlorine Binding Sites List in 3ury
Chlorine binding site 4 out of 4 in the Crystal Structure of Superantigen-Like Protein, Exotoxin From Staphylococcus Aureus Subsp. Aureus Nctc 8325


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of Superantigen-Like Protein, Exotoxin From Staphylococcus Aureus Subsp. Aureus Nctc 8325 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl1

b:58.6
occ:1.00
NZ B:LYS161 3.0 66.8 1.0
ND2 B:ASN152 3.1 47.5 1.0
NE1 B:TRP145 3.2 87.0 1.0
CB B:PHE150 3.8 55.5 1.0
OD1 B:ASN152 4.0 55.2 1.0
CG B:ASN152 4.0 51.6 1.0
CD2 B:PHE150 4.1 60.8 1.0
CD B:LYS161 4.1 62.2 1.0
CD1 B:TRP145 4.1 85.0 1.0
CE2 B:TRP145 4.1 88.7 1.0
CE B:LYS161 4.1 67.9 1.0
CD1 B:LEU142 4.2 72.9 1.0
CG B:PHE150 4.4 57.3 1.0
CZ2 B:TRP145 4.4 89.5 1.0
CB B:LEU142 4.5 68.8 1.0
O B:PHE150 4.6 51.6 1.0
CG B:LEU142 4.8 69.4 1.0
CA B:PHE150 4.9 54.5 1.0
C B:PHE150 5.0 52.7 1.0
N B:PHE150 5.0 56.0 1.0
N B:LEU142 5.0 64.7 1.0
CD2 B:LEU142 5.0 74.9 1.0

Reference:

E.V.Filippova, G.Minasov, L.Shuvalova, A.Halavaty, J.Winsor, I.Dubrovska, F.Bagnoli, F.Falugi, M.Bottomley, G.Grandi, W.F.Anderson, Center For Structural Genomics Of Infectious Diseases(Csgid). Crystal Structure of Superantigen-Like Protein, Exotoxin From Staphylococcus Aureus Subsp. Aureus Nctc 8325 To Be Published.
Page generated: Sun Jul 21 06:26:39 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy