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Chlorine in PDB 3v05: 2.4 Angstrom Crystal Structure of Superantigen-Like Protein From Staphylococcus Aureus.

Protein crystallography data

The structure of 2.4 Angstrom Crystal Structure of Superantigen-Like Protein From Staphylococcus Aureus., PDB code: 3v05 was solved by G.Minasov, A.Halavaty, L.Shuvalova, E.V.Filippova, I.Dubrovska, J.Winsor, F.Bagnoli, F.Falugi, M.Bottomley, G.Grandi, W.F.Anderson, Center Forstructural Genomics Of Infectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.67 / 2.40
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 44.640, 106.504, 162.085, 90.00, 90.00, 90.00
R / Rfree (%) 19.5 / 26

Chlorine Binding Sites:

The binding sites of Chlorine atom in the 2.4 Angstrom Crystal Structure of Superantigen-Like Protein From Staphylococcus Aureus. (pdb code 3v05). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the 2.4 Angstrom Crystal Structure of Superantigen-Like Protein From Staphylococcus Aureus., PDB code: 3v05:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3v05

Go back to Chlorine Binding Sites List in 3v05
Chlorine binding site 1 out of 2 in the 2.4 Angstrom Crystal Structure of Superantigen-Like Protein From Staphylococcus Aureus.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of 2.4 Angstrom Crystal Structure of Superantigen-Like Protein From Staphylococcus Aureus. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl2

b:58.1
occ:1.00
N A:GLY112 3.3 44.8 1.0
O B:THR109 3.5 43.0 1.0
O A:THR109 3.5 43.8 1.0
N B:GLY112 3.5 49.0 1.0
CG2 A:THR109 3.6 47.0 1.0
N A:ASN111 3.7 42.3 1.0
N B:ASN111 3.8 44.8 1.0
C A:THR109 3.8 42.6 1.0
CG2 B:THR109 3.8 42.0 1.0
C B:THR109 4.0 41.8 1.0
CA A:GLY112 4.0 46.7 1.0
CB A:THR109 4.0 44.9 1.0
N A:VAL110 4.1 41.0 1.0
C A:VAL110 4.1 40.8 1.0
CA A:VAL110 4.1 40.3 1.0
C B:VAL110 4.2 43.1 1.0
CA B:GLY112 4.2 50.1 1.0
CA B:VAL110 4.3 41.5 1.0
C A:ASN111 4.3 44.1 1.0
CA A:ASN111 4.3 43.0 1.0
CA B:ASN111 4.3 46.7 1.0
N B:VAL110 4.3 41.4 1.0
C B:ASN111 4.4 47.8 1.0
CB B:THR109 4.4 43.0 1.0
CA A:THR109 4.5 43.5 1.0
CA B:THR109 4.8 41.6 1.0
O A:VAL110 4.9 41.4 1.0

Chlorine binding site 2 out of 2 in 3v05

Go back to Chlorine Binding Sites List in 3v05
Chlorine binding site 2 out of 2 in the 2.4 Angstrom Crystal Structure of Superantigen-Like Protein From Staphylococcus Aureus.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of 2.4 Angstrom Crystal Structure of Superantigen-Like Protein From Staphylococcus Aureus. within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl1

b:59.5
occ:1.00
N C:GLY112 3.2 49.1 1.0
N D:GLY112 3.3 51.8 1.0
OG1 C:THR109 3.4 53.7 1.0
O C:THR109 3.4 47.3 1.0
N D:ASN111 3.6 49.0 1.0
N C:ASN111 3.7 47.1 1.0
O D:THR109 3.7 48.5 1.0
CG2 D:THR109 3.8 49.1 1.0
CA C:GLY112 3.8 50.8 1.0
C C:THR109 3.8 47.4 1.0
C D:THR109 4.0 47.3 1.0
CA D:GLY112 4.0 52.0 1.0
C C:VAL110 4.1 46.1 1.0
C D:VAL110 4.1 47.0 1.0
CB C:THR109 4.2 49.9 1.0
C C:ASN111 4.2 48.8 1.0
N C:VAL110 4.2 46.1 1.0
CA D:ASN111 4.2 49.6 1.0
CA C:VAL110 4.2 45.2 1.0
CA D:VAL110 4.2 46.3 1.0
C D:ASN111 4.2 49.5 1.0
CA C:ASN111 4.3 48.4 1.0
CB D:THR109 4.3 49.7 1.0
N D:VAL110 4.3 46.5 1.0
CA C:THR109 4.7 47.8 1.0
O C:VAL110 4.8 45.6 1.0
CA D:THR109 4.8 47.6 1.0
C C:GLY112 4.9 50.5 1.0

Reference:

G.Minasov, A.Halavaty, L.Shuvalova, E.V.Filippova, I.Dubrovska, J.Winsor, F.Bagnoli, F.Falugi, M.Bottomley, G.Grandi, W.F.Anderson, Center For Structural Genomics Of Infectious Diseases(Csgid). 2.4 Angstrom Crystal Structure of Superantigen-Like Protein From Staphylococcus Aureus. To Be Published.
Page generated: Sun Jul 21 06:39:11 2024

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