Atomistry » Chlorine » PDB 3uwd-3v66 » 3v4m
Atomistry »
  Chlorine »
    PDB 3uwd-3v66 »
      3v4m »

Chlorine in PDB 3v4m: Crystal Structure of A Rna Binding Domain of A U2 Small Nuclear Ribonucleoprotein Auxiliary Factor 2 (U2AF) From Mus Musculus at 1.80 A Resolution

Protein crystallography data

The structure of Crystal Structure of A Rna Binding Domain of A U2 Small Nuclear Ribonucleoprotein Auxiliary Factor 2 (U2AF) From Mus Musculus at 1.80 A Resolution, PDB code: 3v4m was solved by Joint Center For Structural Genomics (Jcsg), Partnership For T-Cellbiology (Tcell), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.19 / 1.80
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 60.192, 60.192, 239.686, 90.00, 90.00, 120.00
R / Rfree (%) 17.7 / 20.7

Other elements in 3v4m:

The structure of Crystal Structure of A Rna Binding Domain of A U2 Small Nuclear Ribonucleoprotein Auxiliary Factor 2 (U2AF) From Mus Musculus at 1.80 A Resolution also contains other interesting chemical elements:

Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A Rna Binding Domain of A U2 Small Nuclear Ribonucleoprotein Auxiliary Factor 2 (U2AF) From Mus Musculus at 1.80 A Resolution (pdb code 3v4m). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of A Rna Binding Domain of A U2 Small Nuclear Ribonucleoprotein Auxiliary Factor 2 (U2AF) From Mus Musculus at 1.80 A Resolution, PDB code: 3v4m:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3v4m

Go back to Chlorine Binding Sites List in 3v4m
Chlorine binding site 1 out of 2 in the Crystal Structure of A Rna Binding Domain of A U2 Small Nuclear Ribonucleoprotein Auxiliary Factor 2 (U2AF) From Mus Musculus at 1.80 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Rna Binding Domain of A U2 Small Nuclear Ribonucleoprotein Auxiliary Factor 2 (U2AF) From Mus Musculus at 1.80 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl478

b:32.0
occ:1.00
O A:HOH626 3.0 36.0 1.0
N A:VAL458 3.2 18.9 1.0
ND2 A:ASN382 3.3 21.8 1.0
O B:HOH513 3.5 26.6 1.0
CA A:ARG457 3.7 22.0 0.5
CA A:ARG457 3.7 22.0 0.5
CG B:PRO386 3.9 24.7 1.0
CD B:PRO386 3.9 26.1 1.0
C A:ARG457 4.0 20.6 1.0
CB A:VAL458 4.0 18.5 1.0
CG2 A:VAL458 4.0 19.6 1.0
CB A:ARG457 4.1 22.6 0.5
CA A:VAL458 4.1 17.5 1.0
CB A:ARG457 4.2 22.4 0.5
NH2 A:ARG457 4.2 27.6 0.5
CZ A:ARG457 4.3 28.6 0.5
CB B:PRO386 4.4 25.5 1.0
CG A:ASN382 4.4 22.8 1.0
NE A:ARG457 4.5 27.4 0.5
O A:ASN456 4.5 23.9 1.0
CD2 B:LEU385 4.5 37.3 1.0
CG A:ARG457 4.5 25.2 0.5
CG A:ARG457 4.5 25.4 0.5
O A:VAL458 4.7 15.3 1.0
NH1 A:ARG457 4.8 31.1 0.5
OD1 A:ASN382 4.8 23.0 1.0
N A:ARG457 4.9 22.6 1.0
C A:VAL458 4.9 16.0 1.0

Chlorine binding site 2 out of 2 in 3v4m

Go back to Chlorine Binding Sites List in 3v4m
Chlorine binding site 2 out of 2 in the Crystal Structure of A Rna Binding Domain of A U2 Small Nuclear Ribonucleoprotein Auxiliary Factor 2 (U2AF) From Mus Musculus at 1.80 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A Rna Binding Domain of A U2 Small Nuclear Ribonucleoprotein Auxiliary Factor 2 (U2AF) From Mus Musculus at 1.80 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl477

b:38.1
occ:1.00
N B:ASP422 2.9 16.3 1.0
CG B:ASP422 3.4 25.0 1.0
CB B:ASP422 3.6 20.6 1.0
CA B:VAL421 3.7 15.3 1.0
OD1 B:ASP422 3.7 28.1 1.0
C B:VAL421 3.8 15.7 1.0
OD2 B:ASP422 3.8 34.1 1.0
CA B:ASP422 3.8 17.9 1.0
O B:PRO420 4.3 15.8 1.0
CD2 B:LEU390 4.5 24.3 1.0
CG1 B:VAL421 4.6 15.2 1.0
N B:VAL421 4.6 15.0 1.0
O B:HOH591 4.6 40.1 1.0
CB B:VAL421 4.7 14.6 1.0
C B:PRO420 4.8 15.9 1.0
O B:ASP422 4.8 17.2 1.0
C B:ASP422 4.9 17.6 1.0
O B:VAL421 5.0 15.4 1.0

Reference:

Joint Center For Structural Genomics (Jcsg), Partnership For T-Cell Biology (Tcell). Crystal Structure of A Rna Binding Domain of A U2 Small Nuclear Ribonucleoprotein Auxiliary Factor 2 (U2AF) From Mus Musculus at 1.80 A Resolution To Be Published.
Page generated: Sat Dec 12 10:16:41 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy