Chlorine in PDB 3vbf: Crystal Structure of Formaldehyde Treated Human Enterovirus 71 (Space Group I23)

The structure of Crystal Structure of Formaldehyde Treated Human Enterovirus 71 (Space Group I23), PDB code: 3vbf was solved by X.Wang, W.Peng, J.Ren, Z.Hu, J.Xu, Z.Lou, X.Li, W.Yin, X.Shen, C.Porta, T.S.Walter, G.Evans, D.Axford, R.Owen, D.J.Rowlands, J.Wang, D.I.Stuart, E.E.Fry, Z.Rao, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	49.67 / 2.60
Space group	I 2 3
Cell size a, b, c (Å), α, β, γ (°)	600.100, 600.100, 600.100, 90.00, 90.00, 90.00
R / Rfree (%)	23.6 / 24

The structure of Crystal Structure of Formaldehyde Treated Human Enterovirus 71 (Space Group I23) also contains other interesting chemical elements:

Potassium	(K)	2 atoms
Sodium	(Na)	1 atom

The binding sites of Chlorine atom in the Crystal Structure of Formaldehyde Treated Human Enterovirus 71 (Space Group I23) (pdb code 3vbf). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Formaldehyde Treated Human Enterovirus 71 (Space Group I23), PDB code: 3vbf:

Chlorine binding site 1 out of 1 in the Crystal Structure of Formaldehyde Treated Human Enterovirus 71 (Space Group I23)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Formaldehyde Treated Human Enterovirus 71 (Space Group I23) within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl302 b:37.4 occ:1.00 O C:HOH414 3.2 28.4 1.0 N C:GLY91 3.2 18.7 1.0 N C:ALA181 3.4 23.3 1.0 NE1 C:TRP111 3.5 23.8 1.0 CA C:GLY91 3.7 19.5 1.0 CB C:ASP89 3.8 17.3 1.0 CA C:HIS180 3.8 18.6 1.0 ND1 C:HIS180 3.8 61.1 1.0 C C:GLY91 3.9 21.9 1.0 CD C:PRO90 3.9 18.4 1.0 N C:PRO90 4.0 15.9 1.0 N C:ARG92 4.1 19.8 1.0 C C:ASP89 4.1 16.6 1.0 CA C:ASP89 4.1 15.7 1.0 C C:HIS180 4.1 17.8 1.0 CE2 C:TRP111 4.2 16.2 1.0 O C:ALA179 4.3 22.5 1.0 CG C:PRO90 4.3 9.8 1.0 CZ2 C:TRP111 4.4 19.3 1.0 C C:PRO90 4.4 21.8 1.0 CB C:ALA181 4.4 9.1 1.0 CB C:HIS180 4.4 20.6 1.0 O C:GLY91 4.5 31.8 1.0 CD1 C:TRP111 4.5 14.9 1.0 CA C:ALA181 4.5 17.8 1.0 CG C:HIS180 4.6 22.0 1.0 CB C:ARG92 4.6 21.8 1.0 CA C:PRO90 4.7 10.8 1.0 O C:ASP89 4.7 24.1 1.0 CG C:ASP89 4.7 21.8 1.0 CE1 C:HIS180 4.8 68.1 1.0 O C:ALA181 4.8 27.1 1.0 N C:HIS180 4.8 25.4 1.0 CA C:ARG92 4.9 18.9 1.0 C C:ALA179 5.0 16.5 1.0 OD2 C:ASP89 5.0 43.8 1.0

X.Wang, W.Peng, J.Ren, Z.Hu, J.Xu, Z.Lou, X.Li, W.Yin, X.Shen, C.Porta, T.S.Walter, G.Evans, D.Axford, R.Owen, D.J.Rowlands, J.Wang, D.I.Stuart, E.E.Fry, Z.Rao. A Sensor-Adaptor Mechanism For Enterovirus Uncoating From Structures of EV71. Nat.Struct.Mol.Biol. V. 19 424 2012.
ISSN: ISSN 1545-9993
PubMed: 22388738
DOI: 10.1038/NSMB.2255