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Chlorine in PDB 3vbt: Exploitation of Hydrogen Bonding Constraints and Flat Hydrophobic Energy Landscapes in Pim-1 Kinase Needle Screening and Inhibitor Design

Enzymatic activity of Exploitation of Hydrogen Bonding Constraints and Flat Hydrophobic Energy Landscapes in Pim-1 Kinase Needle Screening and Inhibitor Design

All present enzymatic activity of Exploitation of Hydrogen Bonding Constraints and Flat Hydrophobic Energy Landscapes in Pim-1 Kinase Needle Screening and Inhibitor Design:
2.7.11.1;

Protein crystallography data

The structure of Exploitation of Hydrogen Bonding Constraints and Flat Hydrophobic Energy Landscapes in Pim-1 Kinase Needle Screening and Inhibitor Design, PDB code: 3vbt was solved by J.Liu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 84.00 / 2.23
Space group P 65
Cell size a, b, c (Å), α, β, γ (°) 97.000, 97.000, 81.000, 90.00, 90.00, 120.00
R / Rfree (%) 22.4 / 27.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Exploitation of Hydrogen Bonding Constraints and Flat Hydrophobic Energy Landscapes in Pim-1 Kinase Needle Screening and Inhibitor Design (pdb code 3vbt). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Exploitation of Hydrogen Bonding Constraints and Flat Hydrophobic Energy Landscapes in Pim-1 Kinase Needle Screening and Inhibitor Design, PDB code: 3vbt:

Chlorine binding site 1 out of 1 in 3vbt

Go back to Chlorine Binding Sites List in 3vbt
Chlorine binding site 1 out of 1 in the Exploitation of Hydrogen Bonding Constraints and Flat Hydrophobic Energy Landscapes in Pim-1 Kinase Needle Screening and Inhibitor Design


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Exploitation of Hydrogen Bonding Constraints and Flat Hydrophobic Energy Landscapes in Pim-1 Kinase Needle Screening and Inhibitor Design within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1

b:54.3
occ:1.00
CL1 A:0F91 0.0 54.3 1.0
CAJ A:0F91 1.8 43.5 1.0
CAK A:0F91 2.7 41.7 1.0
CAI A:0F91 2.7 38.6 1.0
CG A:ARG122 3.6 34.1 1.0
CD1 A:LEU44 3.6 36.9 1.0
CD A:ARG122 3.9 32.4 1.0
CD1 A:LEU174 4.0 32.2 1.0
CAH A:0F91 4.0 38.9 1.0
CAA A:0F91 4.0 41.5 1.0
CG1 A:VAL126 4.0 34.6 1.0
CB A:ALA65 4.2 26.8 1.0
CB A:ARG122 4.3 36.7 1.0
O A:HOH436 4.4 57.0 1.0
CAG A:0F91 4.5 40.1 1.0
CA A:ARG122 4.6 38.4 1.0
CG2 A:VAL126 4.7 34.5 1.0
CD A:PRO123 4.9 40.8 1.0
CB A:VAL126 4.9 36.7 1.0

Reference:

A.C.Good, J.Liu, B.Hirth, G.Asmussen, Y.Xiang, H.P.Biemann, K.A.Bishop, T.Fremgen, M.Fitzgerald, T.Gladysheva, A.Jain, K.Jancsics, M.Metz, A.Papoulis, R.Skerlj, J.D.Stepp, R.R.Wei. Implications of Promiscuous Pim-1 Kinase Fragment Inhibitor Hydrophobic Interactions For Fragment-Based Drug Design. J.Med.Chem. V. 55 2641 2012.
ISSN: ISSN 0022-2623
PubMed: 22339127
DOI: 10.1021/JM2014698
Page generated: Sat Dec 12 10:17:08 2020

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