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Chlorine in PDB 3vig: Crystal Structure of Beta-Glucosidase From Termite Neotermes Koshunensis in Complex with 1-Deoxynojirimycin

Enzymatic activity of Crystal Structure of Beta-Glucosidase From Termite Neotermes Koshunensis in Complex with 1-Deoxynojirimycin

All present enzymatic activity of Crystal Structure of Beta-Glucosidase From Termite Neotermes Koshunensis in Complex with 1-Deoxynojirimycin:
3.2.1.21;

Protein crystallography data

The structure of Crystal Structure of Beta-Glucosidase From Termite Neotermes Koshunensis in Complex with 1-Deoxynojirimycin, PDB code: 3vig was solved by W.Y.Jeng, C.I.Liu, A.H.J.Wang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.30 / 0.99
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 93.108, 68.559, 75.144, 90.00, 95.54, 90.00
R / Rfree (%) 13 / 14.6

Other elements in 3vig:

The structure of Crystal Structure of Beta-Glucosidase From Termite Neotermes Koshunensis in Complex with 1-Deoxynojirimycin also contains other interesting chemical elements:

Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Beta-Glucosidase From Termite Neotermes Koshunensis in Complex with 1-Deoxynojirimycin (pdb code 3vig). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Beta-Glucosidase From Termite Neotermes Koshunensis in Complex with 1-Deoxynojirimycin, PDB code: 3vig:

Chlorine binding site 1 out of 1 in 3vig

Go back to Chlorine Binding Sites List in 3vig
Chlorine binding site 1 out of 1 in the Crystal Structure of Beta-Glucosidase From Termite Neotermes Koshunensis in Complex with 1-Deoxynojirimycin


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Beta-Glucosidase From Termite Neotermes Koshunensis in Complex with 1-Deoxynojirimycin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl511

b:22.1
occ:0.50
O A:HOH1183 2.9 45.1 1.0
O A:HOH610 3.1 13.0 1.0
O A:HOH783 3.6 24.3 1.0
CB A:ARG495 4.1 13.6 1.0
CD A:ARG495 4.4 14.3 1.0
N A:ARG495 4.6 11.8 1.0
OE1 A:GLU494 4.6 14.0 1.0
CG A:ARG495 4.7 13.6 1.0
CA A:ARG495 4.8 13.2 1.0

Reference:

W.Y.Jeng, N.C.Wang, C.T.Lin, W.J.Chang, C.I.Liu, A.H.J.Wang. High-Resolution Structures of Neotermes Koshunensis Beta-Glucosidase Mutants Provide Insights Into the Catalytic Mechanism and the Synthesis of Glucoconjugates Acta Crystallogr.,Sect.D V. 68 829 2012.
ISSN: ISSN 0907-4449
PubMed: 22751668
DOI: 10.1107/S0907444912013224
Page generated: Sat Dec 12 10:17:29 2020

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