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Chlorine in PDB 3vr4: Crystal Structure of Enterococcus Hirae V1-Atpase [EV1]

Enzymatic activity of Crystal Structure of Enterococcus Hirae V1-Atpase [EV1]

All present enzymatic activity of Crystal Structure of Enterococcus Hirae V1-Atpase [EV1]:
3.6.3.15;

Protein crystallography data

The structure of Crystal Structure of Enterococcus Hirae V1-Atpase [EV1], PDB code: 3vr4 was solved by S.Saijo, S.Arai, K.Suzuki, K.Mizutani, Y.Kakinuma, Y.Ishizuka-Katsura, N.Ohsawa, T.Terada, M.Shirouzu, S.Yokoyama, S.Iwata, I.Yamato, T.Murata, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.04 / 2.17
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 127.980, 128.480, 225.930, 90.00, 90.00, 90.00
R / Rfree (%) 16.7 / 21.1

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Enterococcus Hirae V1-Atpase [EV1] (pdb code 3vr4). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Enterococcus Hirae V1-Atpase [EV1], PDB code: 3vr4:

Chlorine binding site 1 out of 1 in 3vr4

Go back to Chlorine Binding Sites List in 3vr4
Chlorine binding site 1 out of 1 in the Crystal Structure of Enterococcus Hirae V1-Atpase [EV1]


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Enterococcus Hirae V1-Atpase [EV1] within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl601

b:26.9
occ:1.00
NH2 E:ARG350 3.3 35.0 1.0
N B:GLY235 3.3 20.2 1.0
NH1 B:ARG262 3.4 19.5 1.0
NH1 E:ARG350 3.4 39.8 1.0
NH2 B:ARG262 3.5 18.5 1.0
O B:HOH903 3.5 34.8 1.0
O B:HOH1019 3.6 26.6 1.0
CA B:PHE234 3.7 18.0 1.0
CZ E:ARG350 3.8 39.3 1.0
CZ B:ARG262 3.9 20.3 1.0
CB B:PHE234 3.9 17.8 1.0
O B:HOH720 3.9 25.0 1.0
C B:PHE234 4.0 20.9 1.0
CD1 E:TYR321 4.2 10.9 1.0
O E:GLY320 4.3 14.3 1.0
CA B:GLY235 4.3 21.8 1.0
CA E:TYR321 4.4 14.9 1.0
NZ B:LYS238 4.4 35.2 1.0
O E:TYR321 4.5 20.9 1.0
O B:HOH713 4.6 25.5 1.0
CE1 E:TYR321 4.7 11.7 1.0
C E:TYR321 4.8 17.4 1.0
CE B:LYS238 4.9 37.8 1.0
N B:PHE234 4.9 17.7 1.0
O B:PRO233 4.9 20.1 1.0

Reference:

S.Arai, S.Saijo, K.Suzuki, K.Mizutani, Y.Kakinuma, Y.Ishizuka-Katsura, N.Ohsawa, T.Terada, M.Shirouzu, S.Yokoyama, S.Iwata, I.Yamato, T.Murata. Rotation Mechanism of Enterococcus Hirae V(1)-Atpase Based on Asymmetric Crystal Structures Nature V. 493 703 2013.
ISSN: ISSN 0028-0836
PubMed: 23334411
DOI: 10.1038/NATURE11778
Page generated: Sat Dec 12 10:18:10 2020

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