Chlorine in PDB 3vy7: Crystal Structure of Human Pancreatic Secretory Protein ZG16P with O- (Alpha-D-Mannosyl)-L-Serine

The structure of Crystal Structure of Human Pancreatic Secretory Protein ZG16P with O- (Alpha-D-Mannosyl)-L-Serine, PDB code: 3vy7 was solved by M.Kanagawa, Y.Yamaguchi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	45.79 / 2.14
Space group	P 21 21 2
Cell size a, b, c (Å), α, β, γ (°)	58.800, 73.000, 30.300, 90.00, 90.00, 90.00
R / Rfree (%)	18.6 / 23.5

The binding sites of Chlorine atom in the Crystal Structure of Human Pancreatic Secretory Protein ZG16P with O- (Alpha-D-Mannosyl)-L-Serine (pdb code 3vy7). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Human Pancreatic Secretory Protein ZG16P with O- (Alpha-D-Mannosyl)-L-Serine, PDB code: 3vy7:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Crystal Structure of Human Pancreatic Secretory Protein ZG16P with O- (Alpha-D-Mannosyl)-L-Serine


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Human Pancreatic Secretory Protein ZG16P with O- (Alpha-D-Mannosyl)-L-Serine within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl203 b:22.7 occ:1.00 O A:HOH345 3.2 28.1 1.0 N A:TRP72 3.3 18.0 1.0 CD1 A:TRP72 3.5 14.9 1.0 O A:LYS70 3.8 20.4 1.0 CB A:TRP72 3.8 16.8 1.0 CA A:VAL71 4.0 19.1 1.0 CG A:TRP72 4.0 16.2 1.0 C A:VAL71 4.1 18.7 1.0 CA A:TRP72 4.2 17.5 1.0 O A:HOH343 4.2 23.5 1.0 NE1 A:TRP72 4.6 15.0 1.0 CG1 A:VAL71 4.7 19.4 1.0 C A:LYS70 4.7 19.7 1.0 N A:VAL71 4.8 19.5 1.0 O A:HOH344 4.9 15.4 1.0 O A:TRP72 4.9 17.4 1.0 CB A:VAL71 4.9 19.1 1.0

Chlorine binding site 2 out of 2 in the Crystal Structure of Human Pancreatic Secretory Protein ZG16P with O- (Alpha-D-Mannosyl)-L-Serine


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Human Pancreatic Secretory Protein ZG16P with O- (Alpha-D-Mannosyl)-L-Serine within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl204 b:53.1 occ:1.00 CD1 A:TYR26 4.6 20.3 1.0 CE1 A:TYR26 4.6 21.2 1.0 CG A:TYR26 4.9 20.2 1.0 CZ A:TYR26 4.9 20.7 1.0

M.Kanagawa, Y.Liu, S.Hanashima, A.Ikeda, W.Chai, Y.Nakano, K.Kojima-Aikawa, T.Feizi, Y.Yamaguchi. Structural Basis For Multiple Sugar Recognition of Jacalin-Related Human ZG16P Lectin J.Biol.Chem. V. 289 16954 2014.
ISSN: ISSN 0021-9258
PubMed: 24790092
DOI: 10.1074/JBC.M113.539114