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Chlorine in PDB 3w32: Egfr Kinase Domain Complexed with Compound 20A

Enzymatic activity of Egfr Kinase Domain Complexed with Compound 20A

All present enzymatic activity of Egfr Kinase Domain Complexed with Compound 20A:
2.7.10.1;

Protein crystallography data

The structure of Egfr Kinase Domain Complexed with Compound 20A, PDB code: 3w32 was solved by S.Sogabe, Y.Kawakita, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.00 / 1.80
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 46.443, 68.306, 103.273, 90.00, 90.00, 90.00
R / Rfree (%) 20 / 23.6

Other elements in 3w32:

The structure of Egfr Kinase Domain Complexed with Compound 20A also contains other interesting chemical elements:

Fluorine (F) 3 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Egfr Kinase Domain Complexed with Compound 20A (pdb code 3w32). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Egfr Kinase Domain Complexed with Compound 20A, PDB code: 3w32:

Chlorine binding site 1 out of 1 in 3w32

Go back to Chlorine Binding Sites List in 3w32
Chlorine binding site 1 out of 1 in the Egfr Kinase Domain Complexed with Compound 20A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Egfr Kinase Domain Complexed with Compound 20A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1101

b:34.2
occ:1.00
CL1 A:W321101 0.0 34.2 1.0
C14 A:W321101 1.7 29.1 1.0
C13 A:W321101 2.7 27.9 1.0
C7 A:W321101 2.7 27.1 1.0
O34 A:W321101 2.9 30.2 1.0
O A:LEU788 3.3 32.9 1.0
CG2 A:THR790 3.5 31.2 1.0
CB A:LYS745 3.6 28.7 1.0
N A:LYS745 3.8 31.0 1.0
C A:LEU788 3.8 30.7 1.0
C12 A:W321101 3.8 32.5 1.0
CB A:LEU788 3.9 33.0 1.0
C6 A:W321101 4.0 28.6 1.0
C5 A:W321101 4.0 28.4 1.0
C11 A:W321101 4.0 28.9 1.0
O A:ALA743 4.0 29.7 1.0
CB A:THR790 4.1 30.0 1.0
N A:THR790 4.3 25.1 1.0
CA A:LYS745 4.3 32.0 1.0
N A:ILE789 4.4 30.6 1.0
CA A:LEU788 4.5 35.3 1.0
C3 A:W321101 4.5 27.6 1.0
C A:ALA743 4.5 29.3 1.0
C A:ILE789 4.5 25.9 1.0
C A:ILE744 4.5 32.9 1.0
CA A:ILE789 4.6 28.9 1.0
CA A:ILE744 4.7 26.9 1.0
N A:ILE744 4.8 29.8 1.0
CD1 A:LEU777 4.8 35.2 1.0
CA A:THR790 4.8 27.2 1.0
CG A:LYS745 4.9 31.9 1.0
CD A:LYS745 4.9 31.8 1.0
CB A:ALA743 4.9 27.8 1.0
CD1 A:LEU788 5.0 34.9 1.0

Reference:

Y.Kawakita, M.Seto, T.Ohashi, T.Tamura, T.Yusa, H.Miki, H.Iwata, H.Kamiguchi, T.Tanaka, S.Sogabe, Y.Ohta, T.Ishikawa. Design and Synthesis of Novel Pyrimido[4,5-B]Azepine Derivatives As HER2/Egfr Dual Inhibitors Bioorg.Med.Chem. V. 21 2250 2013.
ISSN: ISSN 0968-0896
PubMed: 23490150
DOI: 10.1016/J.BMC.2013.02.014
Page generated: Sun Jul 21 07:21:21 2024

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