Chlorine in PDB 3x3f: Trail-R2 Extracellular Region Complexed to A Fab Fragment From Human Agonist Antibody KMTR2

The structure of Trail-R2 Extracellular Region Complexed to A Fab Fragment From Human Agonist Antibody KMTR2, PDB code: 3x3f was solved by T.Tamada, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	47.67 / 2.10
Space group	I 2 2 2
Cell size a, b, c (Å), α, β, γ (°)	144.974, 151.563, 65.044, 90.00, 90.00, 90.00
R / Rfree (%)	18.6 / 22.4

The binding sites of Chlorine atom in the Trail-R2 Extracellular Region Complexed to A Fab Fragment From Human Agonist Antibody KMTR2 (pdb code 3x3f). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Trail-R2 Extracellular Region Complexed to A Fab Fragment From Human Agonist Antibody KMTR2, PDB code: 3x3f:

Chlorine binding site 1 out of 1 in the Trail-R2 Extracellular Region Complexed to A Fab Fragment From Human Agonist Antibody KMTR2


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Trail-R2 Extracellular Region Complexed to A Fab Fragment From Human Agonist Antibody KMTR2 within 5.0Å range: probe atom residue distance (Å) B Occ H:Cl302 b:21.0 occ:1.00 O H:HOH406 3.0 18.0 1.0 N L:PHE98 3.2 18.0 1.0 N H:TRP47 3.4 17.0 1.0 CA L:THR97 3.6 18.0 1.0 CA H:GLU46 3.8 17.7 1.0 C L:THR97 3.9 18.0 1.0 CD2 L:PHE98 3.9 18.0 1.0 O H:LEU45 4.1 16.8 1.0 CB H:TRP47 4.1 17.0 1.0 C H:GLU46 4.1 17.4 1.0 CB L:THR97 4.1 18.7 1.0 CB L:PHE98 4.1 17.5 1.0 CA L:PHE98 4.2 17.2 1.0 CA H:TRP47 4.3 17.1 1.0 O L:LEU96 4.3 17.3 1.0 CG H:GLU46 4.4 19.7 1.0 CG2 L:THR97 4.4 19.1 1.0 O L:HOH407 4.4 16.5 1.0 CG L:PHE98 4.5 17.7 1.0 O L:PHE98 4.5 17.6 1.0 CB H:GLU46 4.6 18.6 1.0 O H:TRP47 4.7 17.7 1.0 N L:THR97 4.7 17.7 1.0 N H:GLU46 4.7 17.7 1.0 C H:LEU45 4.8 17.0 1.0 C L:PHE98 4.9 17.7 1.0 CE2 L:PHE98 4.9 18.1 1.0 NZ H:LYS63 4.9 23.5 1.0 C L:LEU96 5.0 17.6 1.0

T.Tamada, D.Shinmi, M.Ikeda, Y.Yonezawa, S.Kataoka, R.Kuroki, E.Mori, K.Motoki. Trail-R2 Superoligomerization Induced By Human Monoclonal Agonistic Antibody KMTR2 Sci Rep V. 5 17936 2015.
ISSN: ESSN 2045-2322
PubMed: 26672965
DOI: 10.1038/SREP17936