Chlorine in PDB 3x3g: Fab Fragment From Anti Trail-R2 Human Agonist Antibody KMTR2

The structure of Fab Fragment From Anti Trail-R2 Human Agonist Antibody KMTR2, PDB code: 3x3g was solved by T.Tamada, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	38.25 / 2.51
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	153.001, 165.383, 65.297, 90.00, 90.00, 90.00
R / Rfree (%)	18.6 / 22.4

The binding sites of Chlorine atom in the Fab Fragment From Anti Trail-R2 Human Agonist Antibody KMTR2 (pdb code 3x3g). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Fab Fragment From Anti Trail-R2 Human Agonist Antibody KMTR2, PDB code: 3x3g:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in the Fab Fragment From Anti Trail-R2 Human Agonist Antibody KMTR2


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Fab Fragment From Anti Trail-R2 Human Agonist Antibody KMTR2 within 5.0Å range: probe atom residue distance (Å) B Occ H:Cl302 b:79.0 occ:1.00 NH1 H:ARG72 3.5 71.5 1.0 NH2 H:ARG72 3.5 76.2 1.0 CZ H:ARG72 4.0 73.3 1.0 OD2 H:ASP56 4.7 65.3 1.0

Chlorine binding site 2 out of 3 in the Fab Fragment From Anti Trail-R2 Human Agonist Antibody KMTR2


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Fab Fragment From Anti Trail-R2 Human Agonist Antibody KMTR2 within 5.0Å range: probe atom residue distance (Å) B Occ L:Cl301 b:97.1 occ:1.00 NZ L:LYS190 2.8 0.9 1.0 NH2 L:ARG211 3.0 0.8 1.0 CE L:LYS190 3.9 0.6 1.0 CZ L:ARG211 4.0 1.0 1.0 NH1 L:ARG211 4.1 0.1 1.0 CD L:LYS190 4.7 0.5 1.0

Chlorine binding site 3 out of 3 in the Fab Fragment From Anti Trail-R2 Human Agonist Antibody KMTR2


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Fab Fragment From Anti Trail-R2 Human Agonist Antibody KMTR2 within 5.0Å range: probe atom residue distance (Å) B Occ L:Cl302 b:82.3 occ:1.00 NH2 L:ARG61 3.2 67.2 1.0 CG L:GLU81 3.8 80.1 1.0 NH2 L:ARG45 4.3 65.3 1.0 CZ L:ARG61 4.3 69.0 1.0 OE2 L:GLU79 4.3 81.9 0.5 CG L:PRO59 4.4 68.5 1.0 CB L:GLU81 4.4 70.6 1.0 OD1 L:ASP82 4.5 75.0 1.0 NH1 L:ARG61 4.6 64.9 1.0 OE1 L:GLU79 4.6 80.4 0.5 CD L:GLU79 4.8 79.4 0.5 NH1 L:ARG45 4.8 67.1 1.0 CD L:GLU81 5.0 90.0 1.0

T.Tamada, D.Shinmi, M.Ikeda, Y.Yonezawa, S.Kataoka, R.Kuroki, E.Mori, K.Motoki. Trail-R2 Superoligomerization Induced By Human Monoclonal Agonistic Antibody KMTR2 Sci Rep V. 5 17936 2015.
ISSN: ESSN 2045-2322
PubMed: 26672965
DOI: 10.1038/SREP17936