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Chlorine in PDB 3zci: Crystal Structure of Helicobacter Pylori T4SS Protein Cagl in A Cubic Crystal Form with A Distorted Helical Conformation of the Rgd-Motif

Protein crystallography data

The structure of Crystal Structure of Helicobacter Pylori T4SS Protein Cagl in A Cubic Crystal Form with A Distorted Helical Conformation of the Rgd-Motif, PDB code: 3zci was solved by S.Barden, H.H.Niemann, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.868 / 2.20
Space group F 2 3
Cell size a, b, c (Å), α, β, γ (°) 181.002, 181.002, 181.002, 90.00, 90.00, 90.00
R / Rfree (%) 20.75 / 24.46

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Helicobacter Pylori T4SS Protein Cagl in A Cubic Crystal Form with A Distorted Helical Conformation of the Rgd-Motif (pdb code 3zci). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Helicobacter Pylori T4SS Protein Cagl in A Cubic Crystal Form with A Distorted Helical Conformation of the Rgd-Motif, PDB code: 3zci:

Chlorine binding site 1 out of 1 in 3zci

Go back to Chlorine Binding Sites List in 3zci
Chlorine binding site 1 out of 1 in the Crystal Structure of Helicobacter Pylori T4SS Protein Cagl in A Cubic Crystal Form with A Distorted Helical Conformation of the Rgd-Motif


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Helicobacter Pylori T4SS Protein Cagl in A Cubic Crystal Form with A Distorted Helical Conformation of the Rgd-Motif within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1237

b:61.4
occ:0.90
NH1 A:ARG153 2.7 40.3 1.0
CD A:ARG153 3.8 45.9 1.0
CD1 A:LEU208 3.8 39.2 1.0
CZ A:ARG153 3.9 53.4 1.0
CD2 A:LEU208 4.1 29.3 1.0
CB A:LEU208 4.1 35.4 1.0
CG A:LEU208 4.2 35.8 1.0
CG A:ARG153 4.3 41.6 1.0
NE A:ARG153 4.3 39.7 1.0
O A:HOH2110 4.5 57.8 1.0
OD2 A:ASP212 4.9 52.2 0.4

Reference:

S.Barden, S.Lange, N.Tegtmeyer, J.Conradi, N.Sewald, S.Backert, H.H.Niemann. A Helical Rgd Motif Promoting Cell Adhesion: Crystal Structures of the Helicobacter Pylori Type IV Secretion System Pilus Protein Cagl Structure V. 21 1931 2013.
ISSN: ISSN 0969-2126
PubMed: 24076404
DOI: 10.1016/J.STR.2013.08.018
Page generated: Sun Jul 21 07:57:43 2024

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