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Chlorine in PDB 3zfp: Crystal Structure of Product-Like, Processed N-Terminal Protease Npro with Internal His-Tag

Protein crystallography data

The structure of Crystal Structure of Product-Like, Processed N-Terminal Protease Npro with Internal His-Tag, PDB code: 3zfp was solved by T.Zogg, M.Sponring, S.Schindler, M.Koll, R.Schneider, H.Brandstetter, B.Auer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 21.17 / 1.25
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 42.390, 41.040, 44.510, 90.00, 115.31, 90.00
R / Rfree (%) 15.8 / 20.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Product-Like, Processed N-Terminal Protease Npro with Internal His-Tag (pdb code 3zfp). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Product-Like, Processed N-Terminal Protease Npro with Internal His-Tag, PDB code: 3zfp:

Chlorine binding site 1 out of 1 in 3zfp

Go back to Chlorine Binding Sites List in 3zfp
Chlorine binding site 1 out of 1 in the Crystal Structure of Product-Like, Processed N-Terminal Protease Npro with Internal His-Tag


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Product-Like, Processed N-Terminal Protease Npro with Internal His-Tag within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1170

b:12.9
occ:1.00
O A:HOH2133 3.0 26.6 1.0
O A:HOH2129 3.1 12.2 1.0
O A:HOH2004 3.1 9.3 1.0
N A:GLU22 3.3 9.4 1.0
NE2 A:GLN105 3.7 16.3 1.0
CA A:MET21 3.8 14.9 1.0
CB A:PRO102 3.9 7.5 1.0
CB A:MET21 4.0 16.2 1.0
CG A:GLN105 4.0 16.1 1.0
C A:MET21 4.1 11.4 1.0
CB A:GLU104 4.1 13.5 1.0
CD A:GLN105 4.2 16.1 1.0
CB A:GLU22 4.2 9.3 1.0
CE A:MET21 4.3 16.3 1.0
CA A:GLU22 4.4 9.5 1.0
CG A:MET21 4.5 23.4 1.0
OE1 A:GLU104 4.5 30.5 1.0
CD A:GLU104 4.6 29.0 1.0
CA A:PRO102 4.6 7.7 1.0
CG A:GLU104 4.8 16.9 1.0
O A:PRO102 4.8 9.2 1.0
O A:GLU22 4.8 7.9 1.0
C A:PRO102 4.8 8.8 1.0
OH A:TYR98 4.8 8.1 1.0
O A:HOH2134 4.9 30.9 1.0

Reference:

T.Zogg, M.Sponring, S.Schindler, M.Koll, R.Schneider, H.Brandstetter, B.Auer. Crystal Structures of the Viral Protease Npro Imply Distinct Roles For the Catalytic Water in Catalysis Structure V. 21 929 2013.
ISSN: ISSN 0969-2126
PubMed: 23643950
DOI: 10.1016/J.STR.2013.04.003
Page generated: Sun Jul 21 08:01:10 2024

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