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Chlorine in PDB 3zn6: VP16-VP17 Complex, A Complex of the Two Major Capsid Proteins of Bacteriophage P23-77

Protein crystallography data

The structure of VP16-VP17 Complex, A Complex of the Two Major Capsid Proteins of Bacteriophage P23-77, PDB code: 3zn6 was solved by I.Rissanen, J.M.Grimes, A.Pawlowski, S.Mantynen, K.Harlos, J.K.H.Bamford, D.I.Stuart, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 22.40 / 1.53
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 76.780, 69.610, 81.620, 90.00, 104.99, 90.00
R / Rfree (%) 17.2 / 19.7

Other elements in 3zn6:

The structure of VP16-VP17 Complex, A Complex of the Two Major Capsid Proteins of Bacteriophage P23-77 also contains other interesting chemical elements:

Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the VP16-VP17 Complex, A Complex of the Two Major Capsid Proteins of Bacteriophage P23-77 (pdb code 3zn6). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the VP16-VP17 Complex, A Complex of the Two Major Capsid Proteins of Bacteriophage P23-77, PDB code: 3zn6:

Chlorine binding site 1 out of 1 in 3zn6

Go back to Chlorine Binding Sites List in 3zn6
Chlorine binding site 1 out of 1 in the VP16-VP17 Complex, A Complex of the Two Major Capsid Proteins of Bacteriophage P23-77


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of VP16-VP17 Complex, A Complex of the Two Major Capsid Proteins of Bacteriophage P23-77 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl1166

b:28.4
occ:0.50
O B:HOH2016 2.9 36.6 1.0
NH2 B:ARG35 3.0 16.8 1.0
NE B:ARG35 3.3 20.5 1.0
CZ B:ARG35 3.6 22.3 1.0
CZ B:PHE89 3.9 23.3 1.0
CE2 B:TYR142 4.3 14.1 1.0
CE2 B:PHE89 4.3 24.1 1.0
CB B:ARG35 4.5 15.4 1.0
CD B:ARG35 4.6 20.7 1.0
CD2 B:TYR142 4.7 13.2 1.0
CZ B:TYR142 4.8 16.2 1.0
O B:HOH2015 4.8 19.2 1.0
O B:ARG35 4.9 21.1 1.0
NH1 B:ARG35 4.9 23.4 1.0
OH B:TYR142 5.0 18.2 1.0

Reference:

I.Rissanen, J.M.Grimes, A.Pawlowski, S.Mantynen, K.Harlos, J.K.H.Bamford, D.I.Stuart. Bacteriophage P23-77 Capsid Protein Structures Reveal the Archetype of An Ancient Branch From A Major Virus Lineage. Structure V. 21 718 2013.
ISSN: ISSN 0969-2126
PubMed: 23623731
DOI: 10.1016/J.STR.2013.02.026
Page generated: Sun Jul 21 08:11:58 2024

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