Chlorine in PDB 3znj: Crystal Structure of Unliganded Clcf From R.Opacus 1CP in Crystal Form 1.
Protein crystallography data
The structure of Crystal Structure of Unliganded Clcf From R.Opacus 1CP in Crystal Form 1., PDB code: 3znj
was solved by
C.Roth,
J.A.D.Groening,
S.R.Kaschabek,
M.Schloemann,
N.Straeter,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
19.898 /
2.10
|
Space group
|
P 1 21 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
151.140,
79.430,
198.970,
90.00,
93.41,
90.00
|
R / Rfree (%)
|
16.41 /
22.35
|
Chlorine Binding Sites:
Chlorine binding site 1 out
of 40 in 3znj
Go back to
Chlorine Binding Sites List in 3znj
Chlorine binding site 1 out
of 40 in the Crystal Structure of Unliganded Clcf From R.Opacus 1CP in Crystal Form 1.
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Crystal Structure of Unliganded Clcf From R.Opacus 1CP in Crystal Form 1. within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
1:Cl1095
b:29.4
occ:1.00
|
HE2
|
Z:HIS87
|
2.4
|
34.1
|
1.0
|
HD21
|
1:ASN52
|
2.5
|
34.4
|
1.0
|
O2
|
1:EDO1097
|
3.0
|
27.3
|
1.0
|
HH12
|
1:ARG45
|
3.1
|
63.3
|
1.0
|
HO2
|
1:EDO1097
|
3.1
|
32.8
|
1.0
|
HB3
|
1:ASN52
|
3.2
|
25.5
|
1.0
|
NE2
|
Z:HIS87
|
3.2
|
28.4
|
1.0
|
HA2
|
1:GLY51
|
3.2
|
53.4
|
1.0
|
O
|
1:GLY51
|
3.3
|
32.9
|
1.0
|
ND2
|
1:ASN52
|
3.3
|
28.7
|
1.0
|
O
|
1:HOH2044
|
3.4
|
38.7
|
1.0
|
C
|
1:GLY51
|
3.5
|
49.6
|
1.0
|
HG22
|
1:VAL9
|
3.5
|
40.0
|
1.0
|
HE1
|
Z:HIS87
|
3.7
|
41.4
|
1.0
|
H21
|
1:EDO1097
|
3.7
|
33.1
|
1.0
|
H12
|
1:EDO1097
|
3.8
|
34.5
|
1.0
|
CA
|
1:GLY51
|
3.8
|
44.5
|
1.0
|
CE1
|
Z:HIS87
|
3.8
|
34.5
|
1.0
|
NH1
|
1:ARG45
|
3.8
|
52.8
|
1.0
|
HD22
|
1:ASN52
|
3.8
|
34.4
|
1.0
|
C2
|
1:EDO1097
|
3.9
|
27.6
|
1.0
|
HE2
|
1:PHE73
|
3.9
|
45.8
|
1.0
|
CB
|
1:ASN52
|
4.0
|
21.2
|
1.0
|
N
|
1:ASN52
|
4.1
|
30.6
|
1.0
|
HG21
|
1:VAL9
|
4.1
|
40.0
|
1.0
|
CG2
|
1:VAL9
|
4.1
|
33.3
|
1.0
|
HH11
|
1:ARG45
|
4.1
|
63.3
|
1.0
|
CG
|
1:ASN52
|
4.2
|
40.8
|
1.0
|
HD2
|
1:PHE73
|
4.3
|
43.0
|
1.0
|
HE1
|
1:TYR50
|
4.3
|
76.0
|
1.0
|
HG23
|
1:VAL9
|
4.3
|
40.0
|
1.0
|
C1
|
1:EDO1097
|
4.3
|
28.7
|
1.0
|
HH22
|
1:ARG45
|
4.3
|
77.0
|
1.0
|
CD2
|
Z:HIS87
|
4.4
|
35.7
|
1.0
|
H
|
1:ASN52
|
4.5
|
36.8
|
1.0
|
H
|
1:GLY51
|
4.5
|
42.4
|
1.0
|
N
|
1:GLY51
|
4.5
|
35.3
|
1.0
|
HA3
|
1:GLY51
|
4.6
|
53.4
|
1.0
|
CE2
|
1:PHE73
|
4.6
|
38.2
|
1.0
|
CA
|
1:ASN52
|
4.6
|
33.4
|
1.0
|
HD2
|
Z:HIS87
|
4.7
|
42.9
|
1.0
|
HB2
|
1:ASN52
|
4.7
|
25.5
|
1.0
|
CZ
|
1:ARG45
|
4.8
|
43.6
|
1.0
|
CE1
|
1:TYR50
|
4.8
|
63.4
|
1.0
|
CD2
|
1:PHE73
|
4.8
|
35.8
|
1.0
|
H22
|
1:EDO1097
|
4.8
|
33.1
|
1.0
|
HD1
|
1:TYR50
|
4.8
|
57.1
|
1.0
|
NH2
|
1:ARG45
|
4.9
|
64.2
|
1.0
|
O1
|
1:EDO1097
|
4.9
|
28.8
|
1.0
|
HD12
|
1:LEU43
|
4.9
|
33.5
|
1.0
|
HB2
|
1:MET7
|
5.0
|
24.4
|
1.0
|
HA
|
1:ASN52
|
5.0
|
40.1
|
1.0
|
|
Chlorine binding site 2 out
of 40 in 3znj
Go back to
Chlorine Binding Sites List in 3znj
Chlorine binding site 2 out
of 40 in the Crystal Structure of Unliganded Clcf From R.Opacus 1CP in Crystal Form 1.
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Crystal Structure of Unliganded Clcf From R.Opacus 1CP in Crystal Form 1. within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
2:Cl1094
b:29.5
occ:1.00
|
HE2
|
3:HIS87
|
2.4
|
36.3
|
1.0
|
HD21
|
2:ASN52
|
2.6
|
27.3
|
1.0
|
HA2
|
2:GLY51
|
2.8
|
38.3
|
1.0
|
HB3
|
2:ASN52
|
3.2
|
30.0
|
1.0
|
NE2
|
3:HIS87
|
3.2
|
30.3
|
1.0
|
O2
|
2:EDO1096
|
3.3
|
28.9
|
1.0
|
H21
|
2:EDO1096
|
3.3
|
35.7
|
1.0
|
HH12
|
2:ARG45
|
3.3
|
46.6
|
1.0
|
C
|
2:GLY51
|
3.4
|
36.3
|
1.0
|
O
|
2:GLY51
|
3.4
|
29.2
|
1.0
|
ND2
|
2:ASN52
|
3.4
|
22.7
|
1.0
|
O
|
2:HOH2010
|
3.4
|
36.8
|
1.0
|
HG22
|
2:VAL9
|
3.5
|
38.1
|
1.0
|
H12
|
2:EDO1096
|
3.5
|
36.3
|
1.0
|
HO2
|
2:EDO1096
|
3.5
|
34.7
|
1.0
|
CA
|
2:GLY51
|
3.5
|
31.9
|
1.0
|
HH11
|
2:ARG45
|
3.7
|
46.6
|
1.0
|
C2
|
2:EDO1096
|
3.7
|
29.8
|
1.0
|
HE1
|
3:HIS87
|
3.8
|
43.1
|
1.0
|
NH1
|
2:ARG45
|
3.9
|
38.8
|
1.0
|
CE1
|
3:HIS87
|
3.9
|
36.0
|
1.0
|
HD22
|
2:ASN52
|
3.9
|
27.3
|
1.0
|
H
|
2:GLY51
|
3.9
|
41.1
|
1.0
|
N
|
2:ASN52
|
4.0
|
24.0
|
1.0
|
CB
|
2:ASN52
|
4.0
|
25.0
|
1.0
|
HG21
|
2:VAL9
|
4.1
|
38.1
|
1.0
|
HE2
|
2:PHE73
|
4.1
|
47.0
|
1.0
|
CG2
|
2:VAL9
|
4.1
|
31.7
|
1.0
|
C1
|
2:EDO1096
|
4.1
|
30.3
|
1.0
|
N
|
2:GLY51
|
4.2
|
34.2
|
1.0
|
CG
|
2:ASN52
|
4.2
|
32.5
|
1.0
|
HG23
|
2:VAL9
|
4.3
|
38.1
|
1.0
|
HA3
|
2:GLY51
|
4.3
|
38.3
|
1.0
|
HD2
|
2:PHE73
|
4.3
|
51.3
|
1.0
|
H
|
2:ASN52
|
4.3
|
28.8
|
1.0
|
CD2
|
3:HIS87
|
4.4
|
31.6
|
1.0
|
HD2
|
3:HIS87
|
4.6
|
37.9
|
1.0
|
CA
|
2:ASN52
|
4.6
|
31.1
|
1.0
|
HD12
|
2:LEU43
|
4.7
|
33.8
|
1.0
|
H22
|
2:EDO1096
|
4.7
|
35.7
|
1.0
|
HB2
|
2:ASN52
|
4.7
|
30.0
|
1.0
|
CE2
|
2:PHE73
|
4.8
|
39.2
|
1.0
|
H11
|
2:EDO1096
|
4.8
|
36.3
|
1.0
|
HE1
|
2:TYR50
|
4.9
|
56.5
|
1.0
|
O
|
2:HOH2059
|
4.9
|
28.9
|
1.0
|
CD2
|
2:PHE73
|
4.9
|
42.8
|
1.0
|
HB2
|
2:MET7
|
4.9
|
29.7
|
1.0
|
HA
|
2:ASN52
|
5.0
|
37.3
|
1.0
|
|
Chlorine binding site 3 out
of 40 in 3znj
Go back to
Chlorine Binding Sites List in 3znj
Chlorine binding site 3 out
of 40 in the Crystal Structure of Unliganded Clcf From R.Opacus 1CP in Crystal Form 1.
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Crystal Structure of Unliganded Clcf From R.Opacus 1CP in Crystal Form 1. within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
3:Cl1095
b:37.2
occ:1.00
|
HE2
|
2:HIS87
|
2.4
|
28.4
|
1.0
|
HO2
|
3:EDO1096
|
2.5
|
42.7
|
1.0
|
HD21
|
3:ASN52
|
2.6
|
28.9
|
1.0
|
H21
|
3:EDO1096
|
2.8
|
44.5
|
1.0
|
HH12
|
3:ARG45
|
2.9
|
52.1
|
1.0
|
O2
|
3:EDO1096
|
3.2
|
35.6
|
1.0
|
HB3
|
3:ASN52
|
3.2
|
28.8
|
1.0
|
O
|
3:HOH2038
|
3.2
|
36.9
|
1.0
|
NE2
|
2:HIS87
|
3.2
|
23.6
|
1.0
|
ND2
|
3:ASN52
|
3.4
|
24.1
|
1.0
|
C2
|
3:EDO1096
|
3.5
|
37.1
|
1.0
|
HA2
|
3:GLY51
|
3.5
|
41.5
|
1.0
|
HG22
|
3:VAL9
|
3.5
|
45.0
|
1.0
|
NH1
|
3:ARG45
|
3.5
|
43.4
|
1.0
|
HH11
|
3:ARG45
|
3.7
|
52.1
|
1.0
|
HE1
|
2:HIS87
|
3.7
|
46.0
|
1.0
|
CE1
|
2:HIS87
|
3.9
|
38.4
|
1.0
|
H22
|
3:EDO1096
|
3.9
|
44.5
|
1.0
|
HD22
|
3:ASN52
|
3.9
|
28.9
|
1.0
|
HG21
|
3:VAL9
|
4.0
|
45.0
|
1.0
|
C
|
3:GLY51
|
4.0
|
49.0
|
1.0
|
CB
|
3:ASN52
|
4.0
|
24.0
|
1.0
|
N
|
3:ASN52
|
4.1
|
45.2
|
1.0
|
CG2
|
3:VAL9
|
4.1
|
37.5
|
1.0
|
CA
|
3:GLY51
|
4.2
|
34.6
|
1.0
|
HE2
|
3:PHE73
|
4.2
|
33.4
|
1.0
|
H
|
3:ASN52
|
4.2
|
54.3
|
1.0
|
CG
|
3:ASN52
|
4.2
|
34.6
|
1.0
|
HG23
|
3:VAL9
|
4.3
|
45.0
|
1.0
|
O
|
3:GLY51
|
4.4
|
41.0
|
1.0
|
HE1
|
3:TYR50
|
4.4
|
48.0
|
1.0
|
CD2
|
2:HIS87
|
4.4
|
23.9
|
1.0
|
HD2
|
3:PHE73
|
4.4
|
45.3
|
1.0
|
HH22
|
3:ARG45
|
4.5
|
47.8
|
1.0
|
HD2
|
2:HIS87
|
4.6
|
28.7
|
1.0
|
CZ
|
3:ARG45
|
4.6
|
43.3
|
1.0
|
CA
|
3:ASN52
|
4.7
|
44.0
|
1.0
|
N
|
3:GLY51
|
4.7
|
34.9
|
1.0
|
HB2
|
3:ASN52
|
4.8
|
28.8
|
1.0
|
C1
|
3:EDO1096
|
4.8
|
39.8
|
1.0
|
HD12
|
3:LEU43
|
4.8
|
29.0
|
1.0
|
HD1
|
3:TYR50
|
4.8
|
45.0
|
1.0
|
H
|
3:GLY51
|
4.8
|
41.9
|
1.0
|
O1
|
3:EDO1096
|
4.9
|
39.3
|
1.0
|
CE2
|
3:PHE73
|
4.9
|
27.8
|
1.0
|
HA3
|
3:GLY51
|
4.9
|
41.5
|
1.0
|
NH2
|
3:ARG45
|
5.0
|
39.8
|
1.0
|
CE1
|
3:TYR50
|
5.0
|
40.0
|
1.0
|
|
Chlorine binding site 4 out
of 40 in 3znj
Go back to
Chlorine Binding Sites List in 3znj
Chlorine binding site 4 out
of 40 in the Crystal Structure of Unliganded Clcf From R.Opacus 1CP in Crystal Form 1.
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Crystal Structure of Unliganded Clcf From R.Opacus 1CP in Crystal Form 1. within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
4:Cl1095
b:34.3
occ:1.00
|
HE2
|
5:HIS87
|
2.3
|
40.6
|
1.0
|
HD21
|
4:ASN52
|
2.6
|
44.3
|
1.0
|
HO2
|
4:EDO1097
|
2.8
|
44.6
|
1.0
|
HB3
|
4:ASN52
|
2.8
|
34.4
|
1.0
|
O2
|
4:EDO1097
|
3.0
|
37.2
|
1.0
|
HH22
|
4:ARG45
|
3.0
|
67.2
|
1.0
|
NE2
|
5:HIS87
|
3.1
|
33.8
|
1.0
|
O
|
4:GLY51
|
3.5
|
39.0
|
1.0
|
ND2
|
4:ASN52
|
3.5
|
36.9
|
1.0
|
H22
|
4:EDO1097
|
3.5
|
45.8
|
1.0
|
HH12
|
4:ARG45
|
3.5
|
88.4
|
1.0
|
NH2
|
4:ARG45
|
3.6
|
56.0
|
1.0
|
C
|
4:GLY51
|
3.7
|
50.9
|
1.0
|
HA2
|
4:GLY51
|
3.7
|
86.9
|
1.0
|
CB
|
4:ASN52
|
3.8
|
28.7
|
1.0
|
HG22
|
4:VAL9
|
3.8
|
39.6
|
1.0
|
C2
|
4:EDO1097
|
3.8
|
38.1
|
1.0
|
HE1
|
5:HIS87
|
3.8
|
35.0
|
1.0
|
CE1
|
5:HIS87
|
3.9
|
29.1
|
1.0
|
NH1
|
4:ARG45
|
4.0
|
73.7
|
1.0
|
HD22
|
4:ASN52
|
4.0
|
44.3
|
1.0
|
HE2
|
4:PHE73
|
4.1
|
49.4
|
1.0
|
HH21
|
4:ARG45
|
4.1
|
67.2
|
1.0
|
N
|
4:ASN52
|
4.1
|
42.1
|
1.0
|
CG
|
4:ASN52
|
4.1
|
40.0
|
1.0
|
CZ
|
4:ARG45
|
4.2
|
47.4
|
1.0
|
CA
|
4:GLY51
|
4.2
|
72.4
|
1.0
|
CD2
|
5:HIS87
|
4.2
|
34.6
|
1.0
|
HG21
|
4:VAL9
|
4.2
|
39.6
|
1.0
|
H12
|
4:EDO1097
|
4.3
|
49.2
|
1.0
|
CG2
|
4:VAL9
|
4.4
|
33.0
|
1.0
|
HB2
|
4:ASN52
|
4.4
|
34.4
|
1.0
|
HD2
|
4:PHE73
|
4.4
|
40.2
|
1.0
|
HD2
|
5:HIS87
|
4.4
|
41.5
|
1.0
|
HE1
|
4:TYR50
|
4.5
|
61.8
|
1.0
|
CA
|
4:ASN52
|
4.5
|
25.4
|
1.0
|
H
|
4:ASN52
|
4.5
|
50.5
|
1.0
|
HG23
|
4:VAL9
|
4.5
|
39.6
|
1.0
|
C1
|
4:EDO1097
|
4.6
|
41.0
|
1.0
|
HD12
|
4:LEU43
|
4.6
|
35.6
|
1.0
|
H21
|
4:EDO1097
|
4.6
|
45.8
|
1.0
|
HH11
|
4:ARG45
|
4.7
|
88.4
|
1.0
|
CE2
|
4:PHE73
|
4.8
|
41.2
|
1.0
|
HA
|
4:ASN52
|
4.8
|
30.4
|
1.0
|
N
|
4:GLY51
|
4.9
|
35.2
|
1.0
|
O1
|
4:EDO1097
|
4.9
|
42.2
|
1.0
|
CE1
|
4:TYR50
|
4.9
|
51.5
|
1.0
|
CD2
|
4:PHE73
|
5.0
|
33.5
|
1.0
|
HB2
|
4:MET7
|
5.0
|
32.3
|
1.0
|
|
Chlorine binding site 5 out
of 40 in 3znj
Go back to
Chlorine Binding Sites List in 3znj
Chlorine binding site 5 out
of 40 in the Crystal Structure of Unliganded Clcf From R.Opacus 1CP in Crystal Form 1.
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 5 of Crystal Structure of Unliganded Clcf From R.Opacus 1CP in Crystal Form 1. within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
5:Cl1093
b:34.1
occ:1.00
|
HD21
|
5:ASN52
|
2.4
|
27.3
|
1.0
|
HE2
|
4:HIS87
|
2.6
|
38.1
|
1.0
|
HH22
|
5:ARG45
|
3.0
|
75.4
|
1.0
|
HB3
|
5:ASN52
|
3.2
|
34.2
|
1.0
|
O1
|
5:EDO1094
|
3.3
|
38.1
|
1.0
|
ND2
|
5:ASN52
|
3.3
|
22.7
|
1.0
|
HA2
|
5:GLY51
|
3.4
|
68.5
|
1.0
|
NE2
|
4:HIS87
|
3.4
|
31.8
|
1.0
|
HG22
|
5:VAL9
|
3.5
|
39.2
|
1.0
|
HO1
|
5:EDO1094
|
3.5
|
45.7
|
1.0
|
H21
|
5:EDO1094
|
3.6
|
47.6
|
1.0
|
HH12
|
5:ARG45
|
3.7
|
68.4
|
1.0
|
O
|
5:GLY51
|
3.7
|
29.9
|
1.0
|
HD22
|
5:ASN52
|
3.7
|
27.3
|
1.0
|
C
|
5:GLY51
|
3.8
|
71.7
|
1.0
|
NH2
|
5:ARG45
|
3.8
|
62.8
|
1.0
|
HG21
|
5:VAL9
|
3.8
|
39.2
|
1.0
|
H11
|
5:EDO1094
|
3.9
|
45.4
|
1.0
|
CA
|
5:GLY51
|
4.0
|
57.1
|
1.0
|
CB
|
5:ASN52
|
4.0
|
28.5
|
1.0
|
C1
|
5:EDO1094
|
4.0
|
37.8
|
1.0
|
CG2
|
5:VAL9
|
4.0
|
32.7
|
1.0
|
CG
|
5:ASN52
|
4.1
|
32.9
|
1.0
|
HE1
|
5:TYR50
|
4.2
|
63.6
|
1.0
|
HE1
|
4:HIS87
|
4.2
|
58.7
|
1.0
|
HG23
|
5:VAL9
|
4.2
|
39.2
|
1.0
|
CE1
|
4:HIS87
|
4.2
|
48.9
|
1.0
|
HH21
|
5:ARG45
|
4.2
|
75.4
|
1.0
|
N
|
5:ASN52
|
4.3
|
28.0
|
1.0
|
C2
|
5:EDO1094
|
4.3
|
39.7
|
1.0
|
NH1
|
5:ARG45
|
4.3
|
57.0
|
1.0
|
HE2
|
5:PHE73
|
4.4
|
53.2
|
1.0
|
CD2
|
4:HIS87
|
4.4
|
58.3
|
1.0
|
HD2
|
5:PHE73
|
4.5
|
38.2
|
1.0
|
CZ
|
5:ARG45
|
4.5
|
32.2
|
1.0
|
HD1
|
5:TYR50
|
4.5
|
56.1
|
1.0
|
HD2
|
4:HIS87
|
4.6
|
69.9
|
1.0
|
H
|
5:ASN52
|
4.6
|
33.6
|
1.0
|
N
|
5:GLY51
|
4.6
|
39.6
|
1.0
|
HB2
|
5:ASN52
|
4.7
|
34.2
|
1.0
|
CA
|
5:ASN52
|
4.8
|
26.6
|
1.0
|
HD12
|
5:LEU43
|
4.8
|
31.0
|
1.0
|
CE1
|
5:TYR50
|
4.8
|
53.0
|
1.0
|
H
|
5:GLY51
|
4.8
|
47.6
|
1.0
|
HA3
|
5:GLY51
|
4.8
|
68.5
|
1.0
|
HB2
|
5:MET7
|
4.9
|
34.0
|
1.0
|
CD1
|
5:TYR50
|
5.0
|
46.8
|
1.0
|
|
Chlorine binding site 6 out
of 40 in 3znj
Go back to
Chlorine Binding Sites List in 3znj
Chlorine binding site 6 out
of 40 in the Crystal Structure of Unliganded Clcf From R.Opacus 1CP in Crystal Form 1.
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 6 of Crystal Structure of Unliganded Clcf From R.Opacus 1CP in Crystal Form 1. within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
6:Cl1095
b:36.4
occ:1.00
|
HE2
|
7:HIS87
|
2.4
|
42.3
|
1.0
|
HD21
|
6:ASN52
|
2.6
|
28.7
|
1.0
|
HH12
|
6:ARG45
|
2.9
|
37.2
|
1.0
|
HB3
|
6:ASN52
|
3.1
|
37.6
|
1.0
|
O2
|
6:EDO1096
|
3.2
|
25.7
|
1.0
|
NE2
|
7:HIS87
|
3.2
|
35.2
|
1.0
|
HO2
|
6:EDO1096
|
3.3
|
30.8
|
1.0
|
H21
|
6:EDO1096
|
3.4
|
32.5
|
1.0
|
ND2
|
6:ASN52
|
3.4
|
23.9
|
1.0
|
HG22
|
6:VAL9
|
3.6
|
32.3
|
1.0
|
NH1
|
6:ARG45
|
3.6
|
31.0
|
1.0
|
H12
|
6:EDO1096
|
3.7
|
32.5
|
1.0
|
C2
|
6:EDO1096
|
3.8
|
27.1
|
1.0
|
HE1
|
7:HIS87
|
3.8
|
40.0
|
1.0
|
CE1
|
7:HIS87
|
3.9
|
33.3
|
1.0
|
HH22
|
6:ARG45
|
3.9
|
63.8
|
1.0
|
HD22
|
6:ASN52
|
3.9
|
28.7
|
1.0
|
CB
|
6:ASN52
|
4.0
|
31.3
|
1.0
|
HE1
|
6:TYR50
|
4.0
|
52.6
|
1.0
|
O
|
6:GLY51
|
4.0
|
44.0
|
1.0
|
HH11
|
6:ARG45
|
4.0
|
37.2
|
1.0
|
HG21
|
6:VAL9
|
4.0
|
32.3
|
1.0
|
HA2
|
6:GLY51
|
4.0
|
53.3
|
1.0
|
C
|
6:GLY51
|
4.1
|
51.1
|
1.0
|
HE2
|
6:PHE73
|
4.1
|
58.1
|
1.0
|
CG2
|
6:VAL9
|
4.2
|
26.9
|
1.0
|
CG
|
6:ASN52
|
4.2
|
34.5
|
1.0
|
C1
|
6:EDO1096
|
4.3
|
27.1
|
1.0
|
HG23
|
6:VAL9
|
4.3
|
32.3
|
1.0
|
CD2
|
7:HIS87
|
4.4
|
31.7
|
1.0
|
HD1
|
6:TYR50
|
4.4
|
44.1
|
1.0
|
HD2
|
6:PHE73
|
4.4
|
40.1
|
1.0
|
N
|
6:ASN52
|
4.4
|
33.6
|
1.0
|
NH2
|
6:ARG45
|
4.5
|
53.2
|
1.0
|
CZ
|
6:ARG45
|
4.5
|
30.2
|
1.0
|
CA
|
6:GLY51
|
4.5
|
44.4
|
1.0
|
HB2
|
6:ASN52
|
4.6
|
37.6
|
1.0
|
HD2
|
7:HIS87
|
4.6
|
38.1
|
1.0
|
HD12
|
6:LEU43
|
4.7
|
29.0
|
1.0
|
H22
|
6:EDO1096
|
4.8
|
32.5
|
1.0
|
CE1
|
6:TYR50
|
4.8
|
43.9
|
1.0
|
H
|
6:ASN52
|
4.8
|
40.3
|
1.0
|
CA
|
6:ASN52
|
4.8
|
31.0
|
1.0
|
CE2
|
6:PHE73
|
4.9
|
48.5
|
1.0
|
N
|
6:GLY51
|
4.9
|
27.0
|
1.0
|
HG3
|
6:ARG45
|
5.0
|
59.0
|
1.0
|
H
|
6:GLY51
|
5.0
|
32.4
|
1.0
|
CD1
|
6:TYR50
|
5.0
|
36.7
|
1.0
|
|
Chlorine binding site 7 out
of 40 in 3znj
Go back to
Chlorine Binding Sites List in 3znj
Chlorine binding site 7 out
of 40 in the Crystal Structure of Unliganded Clcf From R.Opacus 1CP in Crystal Form 1.
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 7 of Crystal Structure of Unliganded Clcf From R.Opacus 1CP in Crystal Form 1. within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
7:Cl1093
b:34.9
occ:1.00
|
HE2
|
6:HIS87
|
2.5
|
38.7
|
1.0
|
HD21
|
7:ASN52
|
2.6
|
30.8
|
1.0
|
HH21
|
7:ARG45
|
2.9
|
49.0
|
1.0
|
HA2
|
7:GLY51
|
2.9
|
61.6
|
1.0
|
O1
|
7:EDO1095
|
3.1
|
31.6
|
1.0
|
HB3
|
7:ASN52
|
3.1
|
26.3
|
1.0
|
NE2
|
6:HIS87
|
3.3
|
32.3
|
1.0
|
HO1
|
7:EDO1095
|
3.3
|
37.9
|
1.0
|
H11
|
7:EDO1095
|
3.4
|
37.9
|
1.0
|
ND2
|
7:ASN52
|
3.5
|
25.7
|
1.0
|
C
|
7:GLY51
|
3.5
|
54.5
|
1.0
|
NH2
|
7:ARG45
|
3.5
|
40.9
|
1.0
|
H21
|
7:EDO1095
|
3.5
|
39.3
|
1.0
|
HH22
|
7:ARG45
|
3.5
|
49.0
|
1.0
|
CA
|
7:GLY51
|
3.6
|
51.4
|
1.0
|
O
|
7:GLY51
|
3.6
|
39.3
|
1.0
|
C1
|
7:EDO1095
|
3.7
|
31.6
|
1.0
|
HG22
|
7:VAL9
|
3.7
|
49.2
|
1.0
|
HE1
|
6:HIS87
|
3.9
|
36.7
|
1.0
|
H
|
7:GLY51
|
3.9
|
51.6
|
1.0
|
N
|
7:ASN52
|
4.0
|
36.7
|
1.0
|
CB
|
7:ASN52
|
4.0
|
21.9
|
1.0
|
CE1
|
6:HIS87
|
4.0
|
30.6
|
1.0
|
HD22
|
7:ASN52
|
4.0
|
30.8
|
1.0
|
HE2
|
7:PHE73
|
4.1
|
49.5
|
1.0
|
C2
|
7:EDO1095
|
4.1
|
32.8
|
1.0
|
N
|
7:GLY51
|
4.2
|
43.0
|
1.0
|
HG21
|
7:VAL9
|
4.2
|
49.2
|
1.0
|
CG
|
7:ASN52
|
4.2
|
26.0
|
1.0
|
H
|
7:ASN52
|
4.3
|
44.1
|
1.0
|
CG2
|
7:VAL9
|
4.4
|
41.0
|
1.0
|
HA3
|
7:GLY51
|
4.4
|
61.6
|
1.0
|
HD2
|
7:PHE73
|
4.4
|
62.4
|
1.0
|
CD2
|
6:HIS87
|
4.4
|
24.4
|
1.0
|
CA
|
7:ASN52
|
4.6
|
21.8
|
1.0
|
HG23
|
7:VAL9
|
4.6
|
49.2
|
1.0
|
HD2
|
6:HIS87
|
4.7
|
29.2
|
1.0
|
HE1
|
7:TYR50
|
4.7
|
61.2
|
1.0
|
HE
|
7:ARG45
|
4.7
|
51.5
|
1.0
|
HB2
|
7:ASN52
|
4.7
|
26.3
|
1.0
|
CZ
|
7:ARG45
|
4.7
|
54.4
|
1.0
|
H12
|
7:EDO1095
|
4.7
|
37.9
|
1.0
|
HD12
|
7:LEU43
|
4.7
|
46.8
|
1.0
|
CE2
|
7:PHE73
|
4.8
|
41.2
|
1.0
|
O
|
7:HOH2041
|
4.9
|
38.7
|
1.0
|
O2
|
7:EDO1095
|
4.9
|
34.4
|
1.0
|
CE1
|
7:TYR50
|
4.9
|
51.0
|
1.0
|
HA
|
7:ASN52
|
4.9
|
26.2
|
1.0
|
CD2
|
7:PHE73
|
5.0
|
52.0
|
1.0
|
HB2
|
7:MET7
|
5.0
|
43.0
|
1.0
|
HD1
|
7:TYR50
|
5.0
|
53.4
|
1.0
|
H22
|
7:EDO1095
|
5.0
|
39.3
|
1.0
|
|
Chlorine binding site 8 out
of 40 in 3znj
Go back to
Chlorine Binding Sites List in 3znj
Chlorine binding site 8 out
of 40 in the Crystal Structure of Unliganded Clcf From R.Opacus 1CP in Crystal Form 1.
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 8 of Crystal Structure of Unliganded Clcf From R.Opacus 1CP in Crystal Form 1. within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
8:Cl1095
b:39.7
occ:1.00
|
HE2
|
9:HIS87
|
2.4
|
38.2
|
1.0
|
HD21
|
8:ASN52
|
2.5
|
33.2
|
1.0
|
HH12
|
8:ARG45
|
2.8
|
47.7
|
1.0
|
HB3
|
8:ASN52
|
3.0
|
33.6
|
1.0
|
H12
|
8:EDO1097
|
3.1
|
37.3
|
1.0
|
NE2
|
9:HIS87
|
3.2
|
31.9
|
1.0
|
O
|
8:HOH2039
|
3.3
|
43.5
|
1.0
|
O1
|
8:EDO1097
|
3.4
|
32.5
|
1.0
|
ND2
|
8:ASN52
|
3.4
|
27.7
|
1.0
|
HO1
|
8:EDO1097
|
3.4
|
38.9
|
1.0
|
NH1
|
8:ARG45
|
3.5
|
39.7
|
1.0
|
HA2
|
8:GLY51
|
3.5
|
57.6
|
1.0
|
HG22
|
8:VAL9
|
3.6
|
42.8
|
1.0
|
HH11
|
8:ARG45
|
3.6
|
47.7
|
1.0
|
H22
|
8:EDO1097
|
3.7
|
39.9
|
1.0
|
C1
|
8:EDO1097
|
3.7
|
31.1
|
1.0
|
HG21
|
8:VAL9
|
3.8
|
42.8
|
1.0
|
C
|
8:GLY51
|
3.9
|
37.8
|
1.0
|
CB
|
8:ASN52
|
3.9
|
28.0
|
1.0
|
HD22
|
8:ASN52
|
3.9
|
33.2
|
1.0
|
HE1
|
9:HIS87
|
4.0
|
36.3
|
1.0
|
O
|
8:GLY51
|
4.0
|
39.1
|
1.0
|
CE1
|
9:HIS87
|
4.0
|
30.2
|
1.0
|
CG2
|
8:VAL9
|
4.1
|
35.6
|
1.0
|
CA
|
8:GLY51
|
4.1
|
48.0
|
1.0
|
N
|
8:ASN52
|
4.1
|
30.6
|
1.0
|
CG
|
8:ASN52
|
4.2
|
38.8
|
1.0
|
HE1
|
8:TYR50
|
4.2
|
50.6
|
1.0
|
CD2
|
9:HIS87
|
4.3
|
36.6
|
1.0
|
C2
|
8:EDO1097
|
4.3
|
33.2
|
1.0
|
HG23
|
8:VAL9
|
4.4
|
42.8
|
1.0
|
HD2
|
9:HIS87
|
4.4
|
43.9
|
1.0
|
H
|
8:ASN52
|
4.4
|
36.8
|
1.0
|
HE2
|
8:PHE73
|
4.5
|
51.2
|
1.0
|
HD2
|
8:PHE73
|
4.5
|
46.4
|
1.0
|
HB2
|
8:ASN52
|
4.6
|
33.6
|
1.0
|
HH22
|
8:ARG45
|
4.6
|
62.9
|
1.0
|
HD1
|
8:TYR50
|
4.6
|
61.9
|
1.0
|
N
|
8:GLY51
|
4.6
|
27.0
|
1.0
|
CZ
|
8:ARG45
|
4.6
|
61.3
|
1.0
|
CA
|
8:ASN52
|
4.6
|
28.1
|
1.0
|
H11
|
8:EDO1097
|
4.6
|
37.3
|
1.0
|
H
|
8:GLY51
|
4.7
|
32.4
|
1.0
|
HD12
|
8:LEU43
|
4.7
|
42.8
|
1.0
|
HB2
|
8:MET7
|
4.8
|
44.0
|
1.0
|
CE1
|
8:TYR50
|
4.9
|
42.1
|
1.0
|
HA3
|
8:GLY51
|
4.9
|
57.6
|
1.0
|
H21
|
8:EDO1097
|
5.0
|
39.9
|
1.0
|
|
Chlorine binding site 9 out
of 40 in 3znj
Go back to
Chlorine Binding Sites List in 3znj
Chlorine binding site 9 out
of 40 in the Crystal Structure of Unliganded Clcf From R.Opacus 1CP in Crystal Form 1.
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 9 of Crystal Structure of Unliganded Clcf From R.Opacus 1CP in Crystal Form 1. within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
9:Cl1094
b:32.3
occ:1.00
|
HE2
|
8:HIS87
|
2.3
|
35.6
|
1.0
|
HD21
|
9:ASN52
|
2.6
|
29.8
|
1.0
|
HB3
|
9:ASN52
|
3.0
|
32.5
|
1.0
|
NE2
|
8:HIS87
|
3.1
|
29.7
|
1.0
|
O
|
9:HOH2028
|
3.1
|
34.6
|
1.0
|
HA2
|
9:GLY51
|
3.2
|
34.7
|
1.0
|
O1
|
9:EDO1096
|
3.2
|
29.5
|
1.0
|
HH12
|
9:ARG45
|
3.3
|
44.1
|
1.0
|
H21
|
9:EDO1096
|
3.3
|
39.9
|
1.0
|
HH11
|
9:ARG45
|
3.4
|
44.1
|
1.0
|
H11
|
9:EDO1096
|
3.4
|
36.8
|
1.0
|
ND2
|
9:ASN52
|
3.4
|
24.8
|
1.0
|
HO1
|
9:EDO1096
|
3.5
|
35.4
|
1.0
|
O
|
9:GLY51
|
3.5
|
34.1
|
1.0
|
HE1
|
8:HIS87
|
3.5
|
47.0
|
1.0
|
C
|
9:GLY51
|
3.5
|
50.0
|
1.0
|
HG22
|
9:VAL9
|
3.5
|
54.9
|
1.0
|
NH1
|
9:ARG45
|
3.6
|
36.7
|
1.0
|
CE1
|
8:HIS87
|
3.7
|
39.1
|
1.0
|
C1
|
9:EDO1096
|
3.7
|
30.6
|
1.0
|
CA
|
9:GLY51
|
3.7
|
28.9
|
1.0
|
H
|
9:GLY51
|
3.9
|
48.3
|
1.0
|
CB
|
9:ASN52
|
3.9
|
27.1
|
1.0
|
N
|
9:ASN52
|
4.0
|
22.8
|
1.0
|
HD22
|
9:ASN52
|
4.0
|
29.8
|
1.0
|
HG21
|
9:VAL9
|
4.0
|
54.9
|
1.0
|
C2
|
9:EDO1096
|
4.0
|
33.2
|
1.0
|
CG2
|
9:VAL9
|
4.1
|
45.7
|
1.0
|
CG
|
9:ASN52
|
4.2
|
42.5
|
1.0
|
HE2
|
9:PHE73
|
4.2
|
36.0
|
1.0
|
N
|
9:GLY51
|
4.3
|
40.2
|
1.0
|
CD2
|
8:HIS87
|
4.3
|
31.0
|
1.0
|
HD2
|
9:PHE73
|
4.3
|
45.6
|
1.0
|
HG23
|
9:VAL9
|
4.3
|
54.9
|
1.0
|
H
|
9:ASN52
|
4.3
|
27.3
|
1.0
|
CA
|
9:ASN52
|
4.5
|
26.6
|
1.0
|
HE1
|
9:TYR50
|
4.6
|
61.7
|
1.0
|
HB2
|
9:ASN52
|
4.6
|
32.5
|
1.0
|
HD2
|
8:HIS87
|
4.6
|
37.1
|
1.0
|
HA3
|
9:GLY51
|
4.6
|
34.7
|
1.0
|
H22
|
9:EDO1096
|
4.7
|
39.9
|
1.0
|
H12
|
9:EDO1096
|
4.7
|
36.8
|
1.0
|
O
|
9:HOH2050
|
4.8
|
28.5
|
1.0
|
HD12
|
9:LEU43
|
4.8
|
26.9
|
1.0
|
CE2
|
9:PHE73
|
4.8
|
30.0
|
1.0
|
HA
|
9:ASN52
|
4.9
|
31.9
|
1.0
|
CD2
|
9:PHE73
|
4.9
|
38.0
|
1.0
|
CZ
|
9:ARG45
|
4.9
|
42.6
|
1.0
|
ND1
|
8:HIS87
|
4.9
|
33.6
|
1.0
|
HB2
|
9:MET7
|
4.9
|
27.2
|
1.0
|
HD3
|
9:ARG45
|
4.9
|
53.0
|
1.0
|
CE1
|
9:TYR50
|
4.9
|
51.4
|
1.0
|
HD1
|
9:TYR50
|
5.0
|
46.4
|
1.0
|
O2
|
9:EDO1096
|
5.0
|
34.3
|
1.0
|
|
Chlorine binding site 10 out
of 40 in 3znj
Go back to
Chlorine Binding Sites List in 3znj
Chlorine binding site 10 out
of 40 in the Crystal Structure of Unliganded Clcf From R.Opacus 1CP in Crystal Form 1.
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 10 of Crystal Structure of Unliganded Clcf From R.Opacus 1CP in Crystal Form 1. within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl1095
b:23.2
occ:1.00
|
HE2
|
B:HIS87
|
2.4
|
26.2
|
1.0
|
HD21
|
A:ASN52
|
2.5
|
26.5
|
1.0
|
HH12
|
A:ARG45
|
3.0
|
31.0
|
1.0
|
NE2
|
B:HIS87
|
3.2
|
21.9
|
1.0
|
HB3
|
A:ASN52
|
3.2
|
21.5
|
1.0
|
O
|
A:HOH2039
|
3.2
|
36.8
|
1.0
|
O1
|
A:EDO1097
|
3.2
|
20.7
|
1.0
|
H11
|
A:EDO1097
|
3.3
|
30.3
|
1.0
|
H22
|
A:EDO1097
|
3.4
|
30.2
|
1.0
|
ND2
|
A:ASN52
|
3.4
|
22.1
|
1.0
|
HO1
|
A:EDO1097
|
3.4
|
24.8
|
1.0
|
HG22
|
A:VAL9
|
3.5
|
34.7
|
1.0
|
NH1
|
A:ARG45
|
3.6
|
25.8
|
1.0
|
HA2
|
A:GLY51
|
3.6
|
48.4
|
1.0
|
HH11
|
A:ARG45
|
3.7
|
31.0
|
1.0
|
C1
|
A:EDO1097
|
3.7
|
25.2
|
1.0
|
HE1
|
B:HIS87
|
3.7
|
36.8
|
1.0
|
CE1
|
B:HIS87
|
3.8
|
30.7
|
1.0
|
HG21
|
A:VAL9
|
3.9
|
34.7
|
1.0
|
HD22
|
A:ASN52
|
3.9
|
26.5
|
1.0
|
C
|
A:GLY51
|
4.0
|
74.0
|
1.0
|
C2
|
A:EDO1097
|
4.0
|
25.2
|
1.0
|
CB
|
A:ASN52
|
4.1
|
17.9
|
1.0
|
CG2
|
A:VAL9
|
4.1
|
28.9
|
1.0
|
HE2
|
A:PHE73
|
4.2
|
35.8
|
1.0
|
O
|
A:GLY51
|
4.2
|
24.1
|
1.0
|
HE1
|
A:TYR50
|
4.2
|
45.5
|
1.0
|
CG
|
A:ASN52
|
4.2
|
31.2
|
1.0
|
N
|
A:ASN52
|
4.2
|
25.0
|
1.0
|
CA
|
A:GLY51
|
4.2
|
40.3
|
1.0
|
CD2
|
B:HIS87
|
4.3
|
24.7
|
1.0
|
HG23
|
A:VAL9
|
4.3
|
34.7
|
1.0
|
HD2
|
A:PHE73
|
4.4
|
28.2
|
1.0
|
H
|
A:ASN52
|
4.5
|
30.1
|
1.0
|
HD2
|
B:HIS87
|
4.6
|
29.6
|
1.0
|
HD1
|
A:TYR50
|
4.7
|
26.4
|
1.0
|
H21
|
A:EDO1097
|
4.7
|
30.2
|
1.0
|
H12
|
A:EDO1097
|
4.7
|
30.3
|
1.0
|
HB2
|
A:ASN52
|
4.7
|
21.5
|
1.0
|
HD12
|
A:LEU43
|
4.8
|
26.1
|
1.0
|
CA
|
A:ASN52
|
4.8
|
17.8
|
1.0
|
N
|
A:GLY51
|
4.8
|
30.2
|
1.0
|
H
|
A:GLY51
|
4.8
|
36.3
|
1.0
|
CZ
|
A:ARG45
|
4.8
|
32.7
|
1.0
|
HH22
|
A:ARG45
|
4.8
|
40.9
|
1.0
|
CE2
|
A:PHE73
|
4.8
|
29.9
|
1.0
|
CE1
|
A:TYR50
|
4.8
|
38.0
|
1.0
|
HB2
|
A:MET7
|
4.9
|
21.4
|
1.0
|
CD2
|
A:PHE73
|
4.9
|
23.5
|
1.0
|
O
|
A:HOH2154
|
5.0
|
23.3
|
1.0
|
|
Reference:
C.Roth,
A.D.Janosch,
S.R.Kaschabek,
M.Schloemann,
N.Straeter.
Crystal Structure and Catalytic Mechanism of Chloromuconolactone Dehalogenase Clcf From Rhodococcus Opacus 1CP. Mol.Microbiol. V. 88 254 2013.
ISSN: ISSN 0950-382X
PubMed: 23421784
DOI: 10.1111/MMI.12182
Page generated: Sun Jul 21 08:12:11 2024
|