Chlorine in PDB 3znu: Crystal Structure of Clcf in Crystal Form 2
Protein crystallography data
The structure of Crystal Structure of Clcf in Crystal Form 2, PDB code: 3znu
was solved by
C.Roth,
J.A.D.Groening,
S.R.Kaschabek,
M.Schloemann,
N.Straeter,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
19.828 /
1.65
|
Space group
|
P 21 21 21
|
Cell size a, b, c (Å), α, β, γ (°)
|
78.242,
103.574,
141.667,
90.00,
90.00,
90.00
|
R / Rfree (%)
|
15.73 /
19.09
|
Other elements in 3znu:
The structure of Crystal Structure of Clcf in Crystal Form 2 also contains other interesting chemical elements:
Chlorine Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
14;
Binding sites:
The binding sites of Chlorine atom in the Crystal Structure of Clcf in Crystal Form 2
(pdb code 3znu). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 14 binding sites of Chlorine where determined in the
Crystal Structure of Clcf in Crystal Form 2, PDB code: 3znu:
Jump to Chlorine binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Chlorine binding site 1 out
of 14 in 3znu
Go back to
Chlorine Binding Sites List in 3znu
Chlorine binding site 1 out
of 14 in the Crystal Structure of Clcf in Crystal Form 2
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Crystal Structure of Clcf in Crystal Form 2 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl1095
b:16.0
occ:1.00
|
HE2
|
D:HIS87
|
2.4
|
16.2
|
1.0
|
HD21
|
A:ASN52
|
2.5
|
15.3
|
1.0
|
HH12
|
A:ARG45
|
2.7
|
21.0
|
1.0
|
O
|
A:HOH2117
|
3.1
|
23.0
|
1.0
|
O1
|
A:EDO1096
|
3.1
|
17.2
|
1.0
|
HB3
|
A:ASN52
|
3.1
|
14.1
|
1.0
|
NE2
|
D:HIS87
|
3.3
|
13.5
|
1.0
|
ND2
|
A:ASN52
|
3.3
|
12.8
|
1.0
|
HO1
|
A:EDO1096
|
3.4
|
20.7
|
1.0
|
NH1
|
A:ARG45
|
3.4
|
17.5
|
1.0
|
H22
|
A:EDO1096
|
3.5
|
22.2
|
1.0
|
H11
|
A:EDO1096
|
3.6
|
21.3
|
1.0
|
HG22
|
A:VAL9
|
3.6
|
22.6
|
1.0
|
HH11
|
A:ARG45
|
3.6
|
21.0
|
1.0
|
C1
|
A:EDO1096
|
3.8
|
17.8
|
1.0
|
HD22
|
A:ASN52
|
3.8
|
15.3
|
1.0
|
HE2
|
A:PHE73
|
3.9
|
19.1
|
1.0
|
HA2
|
A:GLY51
|
4.0
|
17.2
|
1.0
|
HE1
|
A:TYR50
|
4.0
|
21.1
|
1.0
|
HG21
|
A:VAL9
|
4.0
|
22.6
|
1.0
|
CB
|
A:ASN52
|
4.0
|
11.7
|
1.0
|
C
|
A:GLY51
|
4.1
|
14.6
|
1.0
|
O
|
A:GLY51
|
4.1
|
14.5
|
1.0
|
CG
|
A:ASN52
|
4.2
|
12.3
|
1.0
|
CG2
|
A:VAL9
|
4.2
|
18.8
|
1.0
|
CE1
|
D:HIS87
|
4.2
|
14.8
|
1.0
|
HE1
|
D:HIS87
|
4.2
|
17.7
|
1.0
|
C2
|
A:EDO1096
|
4.2
|
18.5
|
1.0
|
HH22
|
A:ARG45
|
4.2
|
23.8
|
1.0
|
CD2
|
D:HIS87
|
4.3
|
11.4
|
1.0
|
HD1
|
A:TYR50
|
4.3
|
19.5
|
1.0
|
HD2
|
A:PHE73
|
4.4
|
21.7
|
1.0
|
HG23
|
A:VAL9
|
4.4
|
22.6
|
1.0
|
HD2
|
D:HIS87
|
4.4
|
13.7
|
1.0
|
CZ
|
A:ARG45
|
4.4
|
18.3
|
1.0
|
CA
|
A:GLY51
|
4.4
|
14.4
|
1.0
|
N
|
A:ASN52
|
4.5
|
11.8
|
1.0
|
HB2
|
A:ASN52
|
4.6
|
14.1
|
1.0
|
CE2
|
A:PHE73
|
4.6
|
15.9
|
1.0
|
CE1
|
A:TYR50
|
4.7
|
17.6
|
1.0
|
NH2
|
A:ARG45
|
4.7
|
19.8
|
1.0
|
HD12
|
A:LEU43
|
4.7
|
14.9
|
1.0
|
N
|
A:GLY51
|
4.8
|
14.4
|
1.0
|
H
|
A:GLY51
|
4.8
|
17.2
|
1.0
|
H12
|
A:EDO1096
|
4.8
|
21.3
|
1.0
|
H
|
A:ASN52
|
4.8
|
14.2
|
1.0
|
CD1
|
A:TYR50
|
4.8
|
16.2
|
1.0
|
CA
|
A:ASN52
|
4.9
|
11.7
|
1.0
|
CD2
|
A:PHE73
|
4.9
|
18.1
|
1.0
|
H21
|
A:EDO1096
|
4.9
|
22.2
|
1.0
|
HB2
|
A:MET7
|
5.0
|
20.9
|
1.0
|
|
Chlorine binding site 2 out
of 14 in 3znu
Go back to
Chlorine Binding Sites List in 3znu
Chlorine binding site 2 out
of 14 in the Crystal Structure of Clcf in Crystal Form 2
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Crystal Structure of Clcf in Crystal Form 2 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl1095
b:15.5
occ:1.00
|
HE2
|
C:HIS87
|
2.4
|
17.7
|
1.0
|
HD21
|
B:ASN52
|
2.5
|
17.3
|
1.0
|
HH12
|
B:ARG45
|
2.9
|
29.7
|
1.0
|
HB3
|
B:ASN52
|
3.1
|
16.8
|
1.0
|
O1
|
B:EDO1098
|
3.1
|
18.4
|
1.0
|
O
|
B:HOH2103
|
3.2
|
21.2
|
1.0
|
NE2
|
C:HIS87
|
3.2
|
14.7
|
1.0
|
HO1
|
B:EDO1098
|
3.3
|
22.1
|
1.0
|
ND2
|
B:ASN52
|
3.3
|
14.4
|
1.0
|
H22
|
B:EDO1098
|
3.5
|
21.7
|
1.0
|
HG22
|
B:VAL9
|
3.6
|
20.2
|
1.0
|
H11
|
B:EDO1098
|
3.6
|
22.0
|
1.0
|
NH1
|
B:ARG45
|
3.6
|
24.7
|
1.0
|
C1
|
B:EDO1098
|
3.8
|
18.3
|
1.0
|
HH11
|
B:ARG45
|
3.8
|
29.7
|
1.0
|
HD22
|
B:ASN52
|
3.8
|
17.3
|
1.0
|
HG21
|
B:VAL9
|
3.9
|
20.2
|
1.0
|
HA2
|
B:GLY51
|
3.9
|
28.8
|
1.0
|
CB
|
B:ASN52
|
3.9
|
14.0
|
1.0
|
HE2
|
B:PHE73
|
4.0
|
21.6
|
1.0
|
CE1
|
C:HIS87
|
4.1
|
16.6
|
1.0
|
HE1
|
C:HIS87
|
4.1
|
19.9
|
1.0
|
CG2
|
B:VAL9
|
4.1
|
16.8
|
1.0
|
HE1
|
B:TYR50
|
4.1
|
23.6
|
1.0
|
C
|
B:GLY51
|
4.1
|
25.1
|
1.0
|
CG
|
B:ASN52
|
4.1
|
16.1
|
1.0
|
C2
|
B:EDO1098
|
4.2
|
18.1
|
1.0
|
CD2
|
C:HIS87
|
4.2
|
11.4
|
1.0
|
O
|
B:GLY51
|
4.3
|
21.3
|
1.0
|
HG23
|
B:VAL9
|
4.3
|
20.2
|
1.0
|
HD2
|
B:PHE73
|
4.3
|
20.8
|
1.0
|
N
|
B:ASN52
|
4.3
|
15.8
|
1.0
|
HH22
|
B:ARG45
|
4.3
|
25.4
|
1.0
|
HD2
|
C:HIS87
|
4.4
|
13.7
|
1.0
|
HD1
|
B:TYR50
|
4.5
|
20.6
|
1.0
|
CA
|
B:GLY51
|
4.5
|
24.0
|
1.0
|
H
|
B:ASN52
|
4.6
|
19.0
|
1.0
|
HB2
|
B:ASN52
|
4.6
|
16.8
|
1.0
|
CZ
|
B:ARG45
|
4.6
|
16.4
|
1.0
|
CA
|
B:ASN52
|
4.7
|
12.4
|
1.0
|
CE2
|
B:PHE73
|
4.7
|
18.0
|
1.0
|
CE1
|
B:TYR50
|
4.8
|
19.7
|
1.0
|
H12
|
B:EDO1098
|
4.8
|
22.0
|
1.0
|
HD12
|
B:LEU43
|
4.8
|
17.9
|
1.0
|
NH2
|
B:ARG45
|
4.8
|
21.1
|
1.0
|
CD2
|
B:PHE73
|
4.9
|
17.3
|
1.0
|
HB2
|
B:MET7
|
4.9
|
19.1
|
1.0
|
H21
|
B:EDO1098
|
4.9
|
21.7
|
1.0
|
CD1
|
B:TYR50
|
4.9
|
17.1
|
1.0
|
N
|
B:GLY51
|
5.0
|
16.2
|
1.0
|
|
Chlorine binding site 3 out
of 14 in 3znu
Go back to
Chlorine Binding Sites List in 3znu
Chlorine binding site 3 out
of 14 in the Crystal Structure of Clcf in Crystal Form 2
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Crystal Structure of Clcf in Crystal Form 2 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl1096
b:22.1
occ:1.00
|
H
|
B:ASP62
|
2.4
|
12.6
|
1.0
|
HB2
|
B:SER60
|
2.6
|
15.7
|
1.0
|
H
|
B:HIS61
|
2.8
|
11.5
|
1.0
|
O
|
A:HOH2004
|
3.0
|
13.7
|
1.0
|
HB2
|
B:HIS61
|
3.0
|
12.7
|
1.0
|
N
|
B:ASP62
|
3.2
|
10.5
|
1.0
|
HA
|
A:MET1
|
3.3
|
24.5
|
1.0
|
N
|
B:HIS61
|
3.3
|
9.6
|
1.0
|
HB2
|
B:ASP62
|
3.4
|
16.6
|
1.0
|
HG3
|
A:MET1
|
3.4
|
15.0
|
1.0
|
CG
|
B:ASP62
|
3.6
|
25.0
|
1.0
|
CB
|
B:SER60
|
3.6
|
13.1
|
1.0
|
OD2
|
B:ASP62
|
3.7
|
28.0
|
1.0
|
O
|
A:HOH2162
|
3.7
|
34.6
|
1.0
|
CB
|
B:HIS61
|
3.8
|
10.6
|
1.0
|
CB
|
B:ASP62
|
3.8
|
13.8
|
1.0
|
OD1
|
B:ASP62
|
3.9
|
23.0
|
1.0
|
CA
|
B:HIS61
|
3.9
|
7.4
|
1.0
|
SD
|
A:MET1
|
3.9
|
26.2
|
1.0
|
C
|
B:HIS61
|
4.0
|
10.8
|
1.0
|
CG
|
A:MET1
|
4.1
|
12.5
|
1.0
|
HG
|
B:SER60
|
4.1
|
17.9
|
1.0
|
OG
|
B:SER60
|
4.1
|
14.9
|
1.0
|
C
|
B:SER60
|
4.1
|
10.3
|
1.0
|
CA
|
B:ASP62
|
4.1
|
11.1
|
1.0
|
HB3
|
B:SER60
|
4.1
|
15.7
|
1.0
|
HA
|
B:SER60
|
4.2
|
11.0
|
1.0
|
CA
|
B:SER60
|
4.2
|
9.2
|
1.0
|
CA
|
A:MET1
|
4.2
|
20.4
|
1.0
|
CG
|
B:HIS61
|
4.3
|
10.0
|
1.0
|
HD1
|
B:HIS61
|
4.4
|
19.5
|
1.0
|
H
|
A:LEU2
|
4.4
|
14.4
|
1.0
|
ND1
|
B:HIS61
|
4.5
|
16.3
|
1.0
|
HA
|
A:SER85
|
4.5
|
20.0
|
1.0
|
HB3
|
B:HIS61
|
4.6
|
12.7
|
1.0
|
CB
|
A:MET1
|
4.6
|
16.0
|
1.0
|
HA
|
B:ASP62
|
4.6
|
13.3
|
1.0
|
O
|
A:LEU84
|
4.7
|
14.0
|
1.0
|
H3
|
A:MET1
|
4.7
|
25.4
|
1.0
|
HB3
|
B:ASP62
|
4.8
|
16.6
|
1.0
|
H
|
B:GLU63
|
4.8
|
17.0
|
1.0
|
HA
|
B:HIS61
|
4.8
|
8.9
|
1.0
|
HG
|
A:SER85
|
4.9
|
21.3
|
1.0
|
HG2
|
A:MET1
|
4.9
|
15.0
|
1.0
|
HB3
|
A:MET1
|
4.9
|
19.2
|
1.0
|
O
|
B:HOH2118
|
5.0
|
32.2
|
1.0
|
|
Chlorine binding site 4 out
of 14 in 3znu
Go back to
Chlorine Binding Sites List in 3znu
Chlorine binding site 4 out
of 14 in the Crystal Structure of Clcf in Crystal Form 2
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Crystal Structure of Clcf in Crystal Form 2 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Cl1095
b:18.2
occ:1.00
|
HE2
|
B:HIS87
|
2.4
|
16.5
|
1.0
|
HD21
|
C:ASN52
|
2.5
|
18.9
|
1.0
|
HH21
|
C:ARG45
|
2.7
|
28.9
|
1.0
|
HA2
|
C:GLY51
|
2.8
|
25.4
|
1.0
|
O1
|
C:EDO1098
|
3.1
|
18.3
|
1.0
|
HO1
|
C:EDO1098
|
3.2
|
22.0
|
1.0
|
HB3
|
C:ASN52
|
3.2
|
17.4
|
1.0
|
H11
|
C:EDO1098
|
3.3
|
22.0
|
1.0
|
O
|
C:HOH2074
|
3.3
|
28.8
|
1.0
|
NE2
|
B:HIS87
|
3.3
|
13.8
|
1.0
|
ND2
|
C:ASN52
|
3.3
|
15.7
|
1.0
|
C
|
C:GLY51
|
3.4
|
23.5
|
1.0
|
CA
|
C:GLY51
|
3.4
|
21.2
|
1.0
|
NH2
|
C:ARG45
|
3.4
|
24.1
|
1.0
|
HG22
|
C:VAL9
|
3.5
|
29.1
|
1.0
|
O
|
C:GLY51
|
3.5
|
20.6
|
1.0
|
HH22
|
C:ARG45
|
3.5
|
28.9
|
1.0
|
H22
|
C:EDO1098
|
3.6
|
22.1
|
1.0
|
C1
|
C:EDO1098
|
3.6
|
18.4
|
1.0
|
H
|
C:GLY51
|
3.7
|
25.6
|
1.0
|
HD22
|
C:ASN52
|
3.8
|
18.9
|
1.0
|
HE1
|
B:HIS87
|
3.9
|
20.6
|
1.0
|
N
|
C:ASN52
|
3.9
|
17.8
|
1.0
|
CE1
|
B:HIS87
|
4.0
|
17.2
|
1.0
|
HG21
|
C:VAL9
|
4.0
|
29.1
|
1.0
|
N
|
C:GLY51
|
4.0
|
21.4
|
1.0
|
HE2
|
C:PHE73
|
4.0
|
30.0
|
1.0
|
CB
|
C:ASN52
|
4.0
|
14.5
|
1.0
|
CG2
|
C:VAL9
|
4.1
|
24.2
|
1.0
|
C2
|
C:EDO1098
|
4.2
|
18.4
|
1.0
|
CG
|
C:ASN52
|
4.2
|
14.8
|
1.0
|
HA3
|
C:GLY51
|
4.2
|
25.4
|
1.0
|
HD2
|
C:PHE73
|
4.3
|
25.7
|
1.0
|
H
|
C:ASN52
|
4.3
|
21.3
|
1.0
|
HG23
|
C:VAL9
|
4.4
|
29.1
|
1.0
|
CD2
|
B:HIS87
|
4.4
|
10.5
|
1.0
|
HE
|
C:ARG45
|
4.5
|
25.6
|
1.0
|
HD2
|
B:HIS87
|
4.6
|
12.6
|
1.0
|
CA
|
C:ASN52
|
4.6
|
17.0
|
1.0
|
H12
|
C:EDO1098
|
4.6
|
22.0
|
1.0
|
CZ
|
C:ARG45
|
4.6
|
19.8
|
1.0
|
CE2
|
C:PHE73
|
4.7
|
25.0
|
1.0
|
HE1
|
C:TYR50
|
4.8
|
28.4
|
1.0
|
HD12
|
C:LEU43
|
4.8
|
18.2
|
1.0
|
HB2
|
C:ASN52
|
4.8
|
17.4
|
1.0
|
CD2
|
C:PHE73
|
4.9
|
21.4
|
1.0
|
H21
|
C:EDO1098
|
4.9
|
22.1
|
1.0
|
HA
|
C:ASN52
|
4.9
|
20.4
|
1.0
|
HB2
|
C:MET7
|
5.0
|
15.5
|
1.0
|
NE
|
C:ARG45
|
5.0
|
21.4
|
1.0
|
O
|
C:HOH2113
|
5.0
|
20.6
|
1.0
|
|
Chlorine binding site 5 out
of 14 in 3znu
Go back to
Chlorine Binding Sites List in 3znu
Chlorine binding site 5 out
of 14 in the Crystal Structure of Clcf in Crystal Form 2
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 5 of Crystal Structure of Clcf in Crystal Form 2 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Cl1096
b:22.2
occ:1.00
|
H
|
C:ASP62
|
2.4
|
13.2
|
1.0
|
HB2
|
C:SER60
|
2.6
|
16.1
|
1.0
|
H
|
C:HIS61
|
2.8
|
12.5
|
1.0
|
HB2
|
C:HIS61
|
2.8
|
12.2
|
1.0
|
O
|
G:HOH2005
|
2.8
|
14.6
|
1.0
|
HB3
|
G:MET1
|
3.0
|
44.4
|
1.0
|
N
|
C:ASP62
|
3.2
|
11.0
|
1.0
|
HE3
|
G:MET1
|
3.3
|
8.4
|
1.0
|
HB2
|
G:MET1
|
3.3
|
44.4
|
1.0
|
N
|
C:HIS61
|
3.3
|
10.4
|
1.0
|
HB2
|
C:ASP62
|
3.5
|
20.5
|
1.0
|
CG
|
C:ASP62
|
3.5
|
32.9
|
1.0
|
CB
|
G:MET1
|
3.6
|
37.0
|
1.0
|
CB
|
C:SER60
|
3.6
|
13.4
|
1.0
|
CB
|
C:HIS61
|
3.6
|
10.1
|
1.0
|
OD1
|
C:ASP62
|
3.7
|
28.1
|
1.0
|
OD2
|
C:ASP62
|
3.7
|
29.2
|
1.0
|
CA
|
C:HIS61
|
3.8
|
9.5
|
1.0
|
CB
|
C:ASP62
|
3.9
|
17.1
|
1.0
|
O
|
G:HOH2004
|
4.0
|
42.3
|
1.0
|
C
|
C:HIS61
|
4.0
|
11.0
|
1.0
|
CE
|
G:MET1
|
4.0
|
7.0
|
1.0
|
HA
|
G:MET1
|
4.0
|
31.8
|
1.0
|
HG
|
C:SER60
|
4.1
|
17.4
|
1.0
|
CG
|
C:HIS61
|
4.1
|
14.5
|
1.0
|
OG
|
C:SER60
|
4.1
|
14.5
|
1.0
|
C
|
C:SER60
|
4.1
|
9.8
|
1.0
|
CA
|
C:ASP62
|
4.1
|
12.0
|
1.0
|
HE2
|
G:MET1
|
4.1
|
8.4
|
1.0
|
HB3
|
C:SER60
|
4.1
|
16.1
|
1.0
|
SD
|
G:MET1
|
4.2
|
41.0
|
1.0
|
HA
|
C:SER60
|
4.2
|
13.2
|
1.0
|
HD2
|
C:HIS61
|
4.2
|
11.8
|
1.0
|
HA
|
G:SER85
|
4.3
|
22.4
|
1.0
|
CA
|
C:SER60
|
4.3
|
11.0
|
1.0
|
HB3
|
C:HIS61
|
4.4
|
12.2
|
1.0
|
CA
|
G:MET1
|
4.4
|
26.5
|
1.0
|
CD2
|
C:HIS61
|
4.4
|
9.8
|
1.0
|
H
|
G:LEU2
|
4.4
|
15.7
|
1.0
|
HA
|
C:ASP62
|
4.6
|
14.4
|
1.0
|
O
|
G:LEU84
|
4.6
|
15.4
|
1.0
|
CG
|
G:MET1
|
4.7
|
21.5
|
1.0
|
HA
|
C:HIS61
|
4.8
|
11.4
|
1.0
|
HB3
|
C:ASP62
|
4.8
|
20.5
|
1.0
|
HE1
|
G:MET1
|
4.8
|
8.4
|
1.0
|
H
|
C:GLU63
|
4.9
|
15.5
|
1.0
|
HG
|
G:SER85
|
4.9
|
24.9
|
1.0
|
H
|
G:HIS86
|
5.0
|
21.8
|
1.0
|
H2
|
G:MET1
|
5.0
|
24.9
|
1.0
|
|
Chlorine binding site 6 out
of 14 in 3znu
Go back to
Chlorine Binding Sites List in 3znu
Chlorine binding site 6 out
of 14 in the Crystal Structure of Clcf in Crystal Form 2
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 6 of Crystal Structure of Clcf in Crystal Form 2 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Cl1095
b:27.7
occ:1.00
|
HD21
|
D:ASN52
|
2.4
|
23.0
|
1.0
|
HE2
|
A:HIS87
|
2.4
|
23.2
|
1.0
|
HH21
|
D:ARG45
|
2.6
|
38.9
|
1.0
|
O1
|
D:EDO1099
|
3.1
|
19.2
|
1.0
|
ND2
|
D:ASN52
|
3.2
|
19.2
|
1.0
|
NE2
|
A:HIS87
|
3.2
|
19.3
|
1.0
|
NH2
|
D:ARG45
|
3.3
|
32.4
|
1.0
|
O
|
D:HOH2087
|
3.3
|
35.0
|
1.0
|
HB3
|
D:ASN52
|
3.3
|
21.0
|
1.0
|
HO1
|
D:EDO1099
|
3.4
|
23.1
|
1.0
|
H22
|
D:EDO1099
|
3.4
|
24.4
|
1.0
|
HH22
|
D:ARG45
|
3.5
|
38.9
|
1.0
|
H11
|
D:EDO1099
|
3.5
|
23.6
|
1.0
|
O
|
D:GLY51
|
3.6
|
24.9
|
1.0
|
HG22
|
D:VAL9
|
3.6
|
23.6
|
1.0
|
HD22
|
D:ASN52
|
3.7
|
23.0
|
1.0
|
C1
|
D:EDO1099
|
3.7
|
19.6
|
1.0
|
C
|
D:GLY51
|
3.8
|
56.7
|
1.0
|
HA2
|
D:GLY51
|
3.8
|
45.1
|
1.0
|
HG21
|
D:VAL9
|
3.9
|
23.6
|
1.0
|
HE1
|
A:HIS87
|
3.9
|
26.0
|
1.0
|
CE1
|
A:HIS87
|
4.0
|
21.6
|
1.0
|
CB
|
D:ASN52
|
4.1
|
17.5
|
1.0
|
CG2
|
D:VAL9
|
4.1
|
19.7
|
1.0
|
C2
|
D:EDO1099
|
4.1
|
20.3
|
1.0
|
CG
|
D:ASN52
|
4.2
|
22.4
|
1.0
|
N
|
D:ASN52
|
4.2
|
21.9
|
1.0
|
HE2
|
D:PHE73
|
4.2
|
24.0
|
1.0
|
HE
|
D:ARG45
|
4.2
|
25.2
|
1.0
|
HG23
|
D:VAL9
|
4.3
|
23.6
|
1.0
|
CA
|
D:GLY51
|
4.3
|
37.6
|
1.0
|
CD2
|
A:HIS87
|
4.3
|
19.9
|
1.0
|
HE1
|
D:TYR50
|
4.4
|
31.0
|
1.0
|
CZ
|
D:ARG45
|
4.4
|
24.2
|
1.0
|
H
|
D:ASN52
|
4.5
|
26.2
|
1.0
|
HD2
|
D:PHE73
|
4.5
|
23.0
|
1.0
|
HD2
|
A:HIS87
|
4.5
|
23.8
|
1.0
|
CA
|
D:ASN52
|
4.7
|
16.3
|
1.0
|
NE
|
D:ARG45
|
4.7
|
21.0
|
1.0
|
HD12
|
D:LEU43
|
4.8
|
21.5
|
1.0
|
H12
|
D:EDO1099
|
4.8
|
23.6
|
1.0
|
HD1
|
D:TYR50
|
4.8
|
25.8
|
1.0
|
H21
|
D:EDO1099
|
4.8
|
24.4
|
1.0
|
HB2
|
D:ASN52
|
4.9
|
21.0
|
1.0
|
HB2
|
D:MET7
|
4.9
|
21.3
|
1.0
|
N
|
D:GLY51
|
4.9
|
22.7
|
1.0
|
CE1
|
D:TYR50
|
4.9
|
25.8
|
1.0
|
CE2
|
D:PHE73
|
4.9
|
20.0
|
1.0
|
|
Chlorine binding site 7 out
of 14 in 3znu
Go back to
Chlorine Binding Sites List in 3znu
Chlorine binding site 7 out
of 14 in the Crystal Structure of Clcf in Crystal Form 2
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 7 of Crystal Structure of Clcf in Crystal Form 2 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Cl1096
b:28.7
occ:1.00
|
H
|
D:ASP62
|
2.4
|
17.1
|
1.0
|
HB2
|
D:SER60
|
2.6
|
22.3
|
1.0
|
HG2
|
J:MET1
|
2.7
|
52.2
|
1.0
|
H
|
D:HIS61
|
2.7
|
21.3
|
1.0
|
HB2
|
D:HIS61
|
2.8
|
20.1
|
1.0
|
O
|
D:HOH2048
|
2.8
|
38.0
|
1.0
|
O
|
J:HOH2003
|
2.9
|
16.9
|
1.0
|
N
|
D:ASP62
|
3.2
|
14.2
|
1.0
|
N
|
D:HIS61
|
3.3
|
17.7
|
1.0
|
CB
|
D:HIS61
|
3.6
|
16.8
|
1.0
|
CB
|
D:SER60
|
3.6
|
18.6
|
1.0
|
CG
|
D:ASP62
|
3.6
|
30.4
|
1.0
|
CG
|
J:MET1
|
3.6
|
43.5
|
1.0
|
HB2
|
D:ASP62
|
3.6
|
19.9
|
1.0
|
HA
|
J:MET1
|
3.6
|
24.9
|
1.0
|
OD2
|
D:ASP62
|
3.7
|
26.4
|
1.0
|
CA
|
D:HIS61
|
3.8
|
18.2
|
1.0
|
OD1
|
D:ASP62
|
3.8
|
29.0
|
1.0
|
CB
|
D:ASP62
|
4.0
|
16.6
|
1.0
|
O
|
D:HOH2097
|
4.0
|
46.7
|
1.0
|
C
|
D:HIS61
|
4.0
|
18.1
|
1.0
|
CG
|
D:HIS61
|
4.0
|
14.3
|
1.0
|
HB3
|
J:MET1
|
4.1
|
34.6
|
1.0
|
C
|
D:SER60
|
4.1
|
17.6
|
1.0
|
HG
|
D:SER60
|
4.1
|
24.0
|
1.0
|
HD2
|
D:HIS61
|
4.1
|
17.0
|
1.0
|
OG
|
D:SER60
|
4.1
|
20.0
|
1.0
|
HB3
|
D:SER60
|
4.2
|
22.3
|
1.0
|
CA
|
D:ASP62
|
4.2
|
16.3
|
1.0
|
HG3
|
J:MET1
|
4.2
|
52.2
|
1.0
|
CB
|
J:MET1
|
4.2
|
28.8
|
1.0
|
CD2
|
D:HIS61
|
4.3
|
14.2
|
1.0
|
HA
|
D:SER60
|
4.3
|
22.1
|
1.0
|
CA
|
D:SER60
|
4.3
|
18.4
|
1.0
|
HB3
|
D:HIS61
|
4.4
|
20.1
|
1.0
|
HA
|
J:SER85
|
4.4
|
16.2
|
1.0
|
CA
|
J:MET1
|
4.4
|
20.8
|
1.0
|
H
|
J:LEU2
|
4.4
|
18.1
|
1.0
|
SD
|
J:MET1
|
4.5
|
37.0
|
1.0
|
O
|
J:LEU84
|
4.5
|
17.0
|
1.0
|
HA
|
D:ASP62
|
4.6
|
19.6
|
1.0
|
HA
|
D:HIS61
|
4.7
|
21.8
|
1.0
|
HG
|
J:SER85
|
4.8
|
26.2
|
1.0
|
H
|
D:GLU63
|
4.9
|
22.1
|
1.0
|
HB3
|
D:ASP62
|
4.9
|
19.9
|
1.0
|
ND1
|
D:HIS61
|
4.9
|
14.9
|
1.0
|
|
Chlorine binding site 8 out
of 14 in 3znu
Go back to
Chlorine Binding Sites List in 3znu
Chlorine binding site 8 out
of 14 in the Crystal Structure of Clcf in Crystal Form 2
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 8 of Crystal Structure of Clcf in Crystal Form 2 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Cl1095
b:23.5
occ:1.00
|
HE2
|
G:HIS87
|
2.4
|
21.1
|
1.0
|
HD21
|
E:ASN52
|
2.4
|
22.5
|
1.0
|
HH12
|
E:ARG45
|
2.9
|
26.0
|
1.0
|
HB3
|
E:ASN52
|
3.1
|
17.1
|
1.0
|
NE2
|
G:HIS87
|
3.2
|
17.6
|
1.0
|
O
|
E:HOH2038
|
3.2
|
38.0
|
1.0
|
O1
|
E:EDO1097
|
3.3
|
21.8
|
1.0
|
ND2
|
E:ASN52
|
3.3
|
18.8
|
1.0
|
H21
|
E:EDO1097
|
3.4
|
29.0
|
1.0
|
NH1
|
E:ARG45
|
3.6
|
21.7
|
1.0
|
HO1
|
E:EDO1097
|
3.6
|
26.1
|
1.0
|
HG22
|
E:VAL9
|
3.6
|
27.3
|
1.0
|
HH11
|
E:ARG45
|
3.7
|
26.0
|
1.0
|
H12
|
E:EDO1097
|
3.7
|
27.3
|
1.0
|
HD22
|
E:ASN52
|
3.8
|
22.5
|
1.0
|
HA2
|
E:GLY51
|
3.8
|
31.0
|
1.0
|
C1
|
E:EDO1097
|
3.9
|
22.8
|
1.0
|
HE1
|
G:HIS87
|
3.9
|
24.0
|
1.0
|
CB
|
E:ASN52
|
4.0
|
14.2
|
1.0
|
HG21
|
E:VAL9
|
4.0
|
27.3
|
1.0
|
CE1
|
G:HIS87
|
4.0
|
20.0
|
1.0
|
C
|
E:GLY51
|
4.0
|
27.3
|
1.0
|
O
|
E:GLY51
|
4.1
|
19.4
|
1.0
|
CG
|
E:ASN52
|
4.1
|
16.2
|
1.0
|
C2
|
E:EDO1097
|
4.1
|
24.1
|
1.0
|
CG2
|
E:VAL9
|
4.2
|
22.8
|
1.0
|
HE1
|
E:TYR50
|
4.2
|
25.3
|
1.0
|
HE2
|
E:PHE73
|
4.3
|
22.3
|
1.0
|
CD2
|
G:HIS87
|
4.3
|
16.6
|
1.0
|
CA
|
E:GLY51
|
4.3
|
25.8
|
1.0
|
N
|
E:ASN52
|
4.3
|
15.9
|
1.0
|
HG23
|
E:VAL9
|
4.4
|
27.3
|
1.0
|
HD2
|
G:HIS87
|
4.4
|
19.9
|
1.0
|
HD1
|
E:TYR50
|
4.5
|
22.9
|
1.0
|
HD2
|
E:PHE73
|
4.5
|
23.2
|
1.0
|
HH22
|
E:ARG45
|
4.6
|
34.7
|
1.0
|
HB2
|
E:ASN52
|
4.6
|
17.1
|
1.0
|
H
|
E:ASN52
|
4.6
|
19.1
|
1.0
|
H
|
E:GLY51
|
4.7
|
22.2
|
1.0
|
N
|
E:GLY51
|
4.7
|
18.5
|
1.0
|
CZ
|
E:ARG45
|
4.7
|
27.8
|
1.0
|
HD12
|
E:LEU43
|
4.7
|
22.4
|
1.0
|
CA
|
E:ASN52
|
4.8
|
13.1
|
1.0
|
H22
|
E:EDO1097
|
4.8
|
29.0
|
1.0
|
HB2
|
E:MET7
|
4.8
|
18.8
|
1.0
|
CE1
|
E:TYR50
|
4.9
|
21.1
|
1.0
|
H11
|
E:EDO1097
|
4.9
|
27.3
|
1.0
|
CE2
|
E:PHE73
|
5.0
|
18.6
|
1.0
|
|
Chlorine binding site 9 out
of 14 in 3znu
Go back to
Chlorine Binding Sites List in 3znu
Chlorine binding site 9 out
of 14 in the Crystal Structure of Clcf in Crystal Form 2
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 9 of Crystal Structure of Clcf in Crystal Form 2 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:Cl1095
b:22.7
occ:1.00
|
HE1
|
I:HIS87
|
2.4
|
21.3
|
1.0
|
HD21
|
F:ASN52
|
2.4
|
23.1
|
1.0
|
HH12
|
F:ARG45
|
2.8
|
36.5
|
1.0
|
O1
|
F:EDO1097
|
3.1
|
24.2
|
1.0
|
HB3
|
F:ASN52
|
3.1
|
19.7
|
1.0
|
O
|
F:HOH2077
|
3.2
|
29.8
|
1.0
|
CE1
|
I:HIS87
|
3.2
|
17.8
|
1.0
|
ND2
|
F:ASN52
|
3.3
|
19.3
|
1.0
|
HO1
|
F:EDO1097
|
3.3
|
29.1
|
1.0
|
H22
|
F:EDO1097
|
3.5
|
31.4
|
1.0
|
NH1
|
F:ARG45
|
3.5
|
30.4
|
1.0
|
H11
|
F:EDO1097
|
3.5
|
30.1
|
1.0
|
HA2
|
F:GLY51
|
3.6
|
54.5
|
1.0
|
HH11
|
F:ARG45
|
3.7
|
36.5
|
1.0
|
HG22
|
F:VAL9
|
3.7
|
29.9
|
1.0
|
C1
|
F:EDO1097
|
3.8
|
25.1
|
1.0
|
HE2
|
I:HIS87
|
3.8
|
33.3
|
1.0
|
HD22
|
F:ASN52
|
3.8
|
23.1
|
1.0
|
NE2
|
I:HIS87
|
3.9
|
27.7
|
1.0
|
C
|
F:GLY51
|
3.9
|
42.0
|
1.0
|
CB
|
F:ASN52
|
4.0
|
16.4
|
1.0
|
O
|
F:GLY51
|
4.0
|
26.7
|
1.0
|
HG21
|
F:VAL9
|
4.0
|
29.9
|
1.0
|
HE2
|
F:PHE73
|
4.1
|
26.9
|
1.0
|
CG
|
F:ASN52
|
4.1
|
19.3
|
1.0
|
C2
|
F:EDO1097
|
4.2
|
26.1
|
1.0
|
CA
|
F:GLY51
|
4.2
|
45.5
|
1.0
|
CG2
|
F:VAL9
|
4.2
|
24.9
|
1.0
|
HE1
|
F:TYR50
|
4.3
|
23.4
|
1.0
|
N
|
F:ASN52
|
4.3
|
24.4
|
1.0
|
ND1
|
I:HIS87
|
4.4
|
24.6
|
1.0
|
HD2
|
F:PHE73
|
4.4
|
22.1
|
1.0
|
HG23
|
F:VAL9
|
4.4
|
29.9
|
1.0
|
HH22
|
F:ARG45
|
4.4
|
32.1
|
1.0
|
HD1
|
F:TYR50
|
4.5
|
23.6
|
1.0
|
HD1
|
I:HIS87
|
4.5
|
29.5
|
1.0
|
H
|
F:ASN52
|
4.6
|
29.2
|
1.0
|
CZ
|
F:ARG45
|
4.6
|
21.9
|
1.0
|
HB2
|
F:ASN52
|
4.7
|
19.7
|
1.0
|
N
|
F:GLY51
|
4.7
|
28.2
|
1.0
|
H12
|
F:EDO1097
|
4.8
|
30.1
|
1.0
|
CA
|
F:ASN52
|
4.8
|
22.7
|
1.0
|
HD12
|
F:LEU43
|
4.8
|
25.8
|
1.0
|
CE2
|
F:PHE73
|
4.8
|
22.5
|
1.0
|
H
|
F:GLY51
|
4.8
|
33.8
|
1.0
|
CE1
|
F:TYR50
|
4.9
|
19.5
|
1.0
|
NH2
|
F:ARG45
|
4.9
|
26.8
|
1.0
|
H21
|
F:EDO1097
|
4.9
|
31.4
|
1.0
|
HB2
|
F:MET7
|
4.9
|
26.9
|
1.0
|
CD2
|
F:PHE73
|
4.9
|
18.4
|
1.0
|
|
Chlorine binding site 10 out
of 14 in 3znu
Go back to
Chlorine Binding Sites List in 3znu
Chlorine binding site 10 out
of 14 in the Crystal Structure of Clcf in Crystal Form 2
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 10 of Crystal Structure of Clcf in Crystal Form 2 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
G:Cl1095
b:19.7
occ:1.00
|
HE2
|
E:HIS87
|
2.4
|
17.6
|
1.0
|
HD21
|
G:ASN52
|
2.4
|
19.5
|
1.0
|
HH12
|
G:ARG45
|
2.9
|
27.6
|
1.0
|
HB3
|
G:ASN52
|
3.1
|
17.7
|
1.0
|
O
|
G:HOH2092
|
3.1
|
27.6
|
1.0
|
O1
|
G:EDO1097
|
3.2
|
18.8
|
1.0
|
NE2
|
E:HIS87
|
3.3
|
14.6
|
1.0
|
ND2
|
G:ASN52
|
3.3
|
16.2
|
1.0
|
HO1
|
G:EDO1097
|
3.5
|
22.5
|
1.0
|
H22
|
G:EDO1097
|
3.5
|
24.0
|
1.0
|
NH1
|
G:ARG45
|
3.5
|
23.0
|
1.0
|
H11
|
G:EDO1097
|
3.6
|
23.2
|
1.0
|
HH11
|
G:ARG45
|
3.7
|
27.6
|
1.0
|
HG22
|
G:VAL9
|
3.7
|
24.1
|
1.0
|
HA2
|
G:GLY51
|
3.7
|
26.9
|
1.0
|
HD22
|
G:ASN52
|
3.8
|
19.5
|
1.0
|
C1
|
G:EDO1097
|
3.8
|
19.3
|
1.0
|
HG21
|
G:VAL9
|
4.0
|
24.1
|
1.0
|
CB
|
G:ASN52
|
4.0
|
14.7
|
1.0
|
C
|
G:GLY51
|
4.0
|
23.3
|
1.0
|
HE1
|
G:TYR50
|
4.1
|
26.8
|
1.0
|
HE2
|
G:PHE73
|
4.1
|
23.3
|
1.0
|
HE1
|
E:HIS87
|
4.1
|
19.4
|
1.0
|
CE1
|
E:HIS87
|
4.1
|
16.2
|
1.0
|
O
|
G:GLY51
|
4.1
|
19.8
|
1.0
|
CG
|
G:ASN52
|
4.1
|
16.9
|
1.0
|
CG2
|
G:VAL9
|
4.2
|
20.1
|
1.0
|
C2
|
G:EDO1097
|
4.2
|
20.0
|
1.0
|
CA
|
G:GLY51
|
4.3
|
22.4
|
1.0
|
N
|
G:ASN52
|
4.3
|
17.3
|
1.0
|
CD2
|
E:HIS87
|
4.3
|
14.7
|
1.0
|
HD2
|
E:HIS87
|
4.4
|
17.7
|
1.0
|
HG23
|
G:VAL9
|
4.4
|
24.1
|
1.0
|
HD1
|
G:TYR50
|
4.4
|
27.3
|
1.0
|
HD2
|
G:PHE73
|
4.5
|
19.2
|
1.0
|
HH22
|
G:ARG45
|
4.5
|
26.8
|
1.0
|
H
|
G:ASN52
|
4.6
|
20.8
|
1.0
|
CZ
|
G:ARG45
|
4.6
|
23.3
|
1.0
|
HB2
|
G:ASN52
|
4.6
|
17.7
|
1.0
|
CE1
|
G:TYR50
|
4.7
|
22.4
|
1.0
|
CA
|
G:ASN52
|
4.7
|
15.2
|
1.0
|
N
|
G:GLY51
|
4.8
|
16.6
|
1.0
|
HD12
|
G:LEU43
|
4.8
|
18.0
|
1.0
|
CE2
|
G:PHE73
|
4.8
|
19.4
|
1.0
|
H
|
G:GLY51
|
4.8
|
20.0
|
1.0
|
H12
|
G:EDO1097
|
4.9
|
23.2
|
1.0
|
NH2
|
G:ARG45
|
4.9
|
22.4
|
1.0
|
CD1
|
G:TYR50
|
4.9
|
22.7
|
1.0
|
HB2
|
G:MET7
|
4.9
|
17.5
|
1.0
|
H21
|
G:EDO1097
|
4.9
|
24.0
|
1.0
|
|
Reference:
C.Roth,
A.D.Janosch,
S.R.Kaschabek,
M.Schloemann,
N.Straeter.
Crystal Structure and Catalytic Mechanism of Chloromuconolactone Dehalogenase Clcf From Rhodococcus Opacus 1CP. Mol.Microbiol. V. 88 254 2013.
ISSN: ISSN 0950-382X
PubMed: 23421784
DOI: 10.1111/MMI.12182
Page generated: Sun Jul 21 08:12:41 2024
|