Chlorine in PDB 3zw7: The 3-Dimensional Structure of Mpgp From Thermus Thermophilus HB27, in Complex with the Alpha-Mannosylglycerate and Metaphosphate.

Enzymatic activity of The 3-Dimensional Structure of Mpgp From Thermus Thermophilus HB27, in Complex with the Alpha-Mannosylglycerate and Metaphosphate.

All present enzymatic activity of The 3-Dimensional Structure of Mpgp From Thermus Thermophilus HB27, in Complex with the Alpha-Mannosylglycerate and Metaphosphate.:
3.1.3.70;

Protein crystallography data

The structure of The 3-Dimensional Structure of Mpgp From Thermus Thermophilus HB27, in Complex with the Alpha-Mannosylglycerate and Metaphosphate., PDB code: 3zw7 was solved by S.Goncalves, A.M.Esteves, H.Santos, N.Borges, P.M.Matias, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

*Resolution Low / High (Å)*	24.958 / 1.90
*Space group*	P 1 2₁ 1
*Cell size a, b, c (Å), α, β, γ (°)*	39.794, 70.804, 92.770, 90.00, 95.54, 90.00
*R / R_free (%)*	16.23 / 20.34

Other elements in 3zw7:

The structure of The 3-Dimensional Structure of Mpgp From Thermus Thermophilus HB27, in Complex with the Alpha-Mannosylglycerate and Metaphosphate. also contains other interesting chemical elements:

Magnesium

(Mg)

2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the The 3-Dimensional Structure of Mpgp From Thermus Thermophilus HB27, in Complex with the Alpha-Mannosylglycerate and Metaphosphate. (pdb code 3zw7). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the The 3-Dimensional Structure of Mpgp From Thermus Thermophilus HB27, in Complex with the Alpha-Mannosylglycerate and Metaphosphate., PDB code: 3zw7:

Chlorine binding site 1 out of 1 in 3zw7

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Chlorine Binding Sites List in 3zw7

Chlorine binding site 1 out of 1 in the The 3-Dimensional Structure of Mpgp From Thermus Thermophilus HB27, in Complex with the Alpha-Mannosylglycerate and Metaphosphate.

Mono view

Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The 3-Dimensional Structure of Mpgp From Thermus Thermophilus HB27, in Complex with the Alpha-Mannosylglycerate and Metaphosphate. within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
A:Cl1254 b:57.8 occ:1.00	OG1	A:THR39	2.7	29.9	1.0
	N	A:ASP8	3.2	42.3	1.0
	OD1	A:ASP6	3.2	51.7	1.0
	O	A:HOH2012	3.5	35.1	0.5
	N	A:LEU7	3.5	43.5	1.0
	CB	A:THR39	3.5	31.6	1.0
	CB	A:LEU7	3.6	44.7	1.0
	O	A:HOH2008	3.6	50.0	0.8
	CA	A:LEU7	3.8	45.3	1.0
	CA	A:THR39	3.8	28.4	1.0
	N	A:ALA40	3.9	24.7	1.0
	CB	A:ASP8	3.9	71.4	1.0
	C	A:LEU7	4.0	53.1	1.0
	O	A:HOH2006	4.0	68.6	0.9
	CA	A:ASP8	4.1	65.3	1.0
	MG	A:MG260	4.2	64.1	1.0
	CG	A:ASP6	4.2	60.5	1.0
	CE	A:LYS41	4.3	42.8	1.0
	CG	A:ASP8	4.4	81.5	1.0
	C	A:THR39	4.4	26.2	1.0
	CG	A:LEU7	4.5	45.2	1.0
	C	A:ASP6	4.7	51.2	1.0
	CG	A:LYS41	4.7	30.1	1.0
	O	A:VAL38	4.7	36.7	1.0
	CD	A:LYS41	4.7	35.6	1.0
	OD2	A:ASP8	4.8	84.8	1.0
	OD2	A:ASP6	4.8	58.3	1.0
	N	A:LYS41	4.8	22.2	1.0
	OD1	A:ASP8	4.9	78.9	1.0
	CA	A:ALA40	4.9	22.7	1.0
	CG2	A:THR39	4.9	24.3	1.0
	CB	A:ALA40	4.9	31.1	1.0
	O	A:ASP8	5.0	52.0	1.0

Reference:

S.Goncalves, A.M.Esteves, H.Santos, N.Borges, P.M.Matias. The Three-Dimensional Structure of Mannosyl-3- Phosphoglycerate Phosphatase From Thermus Thermophilus HB27: A New Member of the Haloalkanoic Acid Dehalogenase Superfamily. Biochemistry V. 50 9551 2011.
ISSN: ISSN 0006-2960
PubMed: 21961705
DOI: 10.1021/BI201171H

Page generated: Sun Jul 21 08:31:46 2024

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