Chlorine in PDB 4a1h: Human Myelin P2 Protein, K45S Mutant
Protein crystallography data
The structure of Human Myelin P2 Protein, K45S Mutant, PDB code: 4a1h
was solved by
M.Lehtimaki,
P.Kursula,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
19.95 /
2.20
|
Space group
|
C 1 2 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
120.130,
63.610,
84.470,
90.00,
130.10,
90.00
|
R / Rfree (%)
|
19.4 /
25.2
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Human Myelin P2 Protein, K45S Mutant
(pdb code 4a1h). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the
Human Myelin P2 Protein, K45S Mutant, PDB code: 4a1h:
Jump to Chlorine binding site number:
1;
2;
3;
Chlorine binding site 1 out
of 3 in 4a1h
Go back to
Chlorine Binding Sites List in 4a1h
Chlorine binding site 1 out
of 3 in the Human Myelin P2 Protein, K45S Mutant
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Human Myelin P2 Protein, K45S Mutant within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl1134
b:53.6
occ:1.00
|
O
|
A:HOH2042
|
3.0
|
50.0
|
1.0
|
N
|
A:LYS37
|
3.5
|
43.4
|
1.0
|
CB
|
A:SER55
|
3.6
|
28.1
|
1.0
|
N
|
A:THR56
|
3.7
|
36.6
|
1.0
|
O
|
A:LYS37
|
3.7
|
43.1
|
1.0
|
CA
|
A:SER55
|
3.9
|
29.3
|
1.0
|
C
|
A:LYS37
|
3.9
|
41.4
|
1.0
|
O
|
A:HOH2007
|
4.0
|
46.5
|
1.0
|
CA
|
A:ALA36
|
4.1
|
39.8
|
1.0
|
OG1
|
A:THR56
|
4.2
|
45.7
|
1.0
|
CA
|
A:LYS37
|
4.2
|
42.6
|
1.0
|
CB
|
A:ALA36
|
4.3
|
38.6
|
1.0
|
C
|
A:SER55
|
4.3
|
33.7
|
1.0
|
C
|
A:ALA36
|
4.3
|
41.3
|
1.0
|
O
|
A:HOH2008
|
4.4
|
49.5
|
1.0
|
CG2
|
A:THR56
|
4.4
|
44.7
|
1.0
|
N
|
A:PRO38
|
4.5
|
36.9
|
1.0
|
CB
|
A:THR56
|
4.7
|
44.2
|
1.0
|
CB
|
A:LYS37
|
4.7
|
46.5
|
1.0
|
CA
|
A:THR56
|
4.8
|
42.5
|
1.0
|
CA
|
A:PRO38
|
4.8
|
31.3
|
1.0
|
OG
|
A:SER55
|
4.8
|
28.6
|
1.0
|
|
Chlorine binding site 2 out
of 3 in 4a1h
Go back to
Chlorine Binding Sites List in 4a1h
Chlorine binding site 2 out
of 3 in the Human Myelin P2 Protein, K45S Mutant
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Human Myelin P2 Protein, K45S Mutant within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl1133
b:70.6
occ:1.00
|
O
|
B:HOH2033
|
3.2
|
37.0
|
1.0
|
N
|
B:LYS37
|
3.3
|
48.8
|
1.0
|
N
|
B:THR56
|
3.4
|
38.9
|
1.0
|
OG1
|
B:THR56
|
3.8
|
40.2
|
1.0
|
CB
|
B:SER55
|
3.8
|
39.4
|
1.0
|
CA
|
B:SER55
|
3.9
|
39.9
|
1.0
|
O
|
B:LYS37
|
4.0
|
51.6
|
1.0
|
C
|
B:LYS37
|
4.0
|
49.6
|
1.0
|
CA
|
B:ALA36
|
4.1
|
45.3
|
1.0
|
CA
|
B:LYS37
|
4.1
|
52.7
|
1.0
|
C
|
B:ALA36
|
4.2
|
46.8
|
1.0
|
CB
|
B:THR56
|
4.2
|
39.0
|
1.0
|
C
|
B:SER55
|
4.2
|
39.1
|
1.0
|
CA
|
B:THR56
|
4.4
|
39.1
|
1.0
|
CB
|
B:ALA36
|
4.5
|
41.3
|
1.0
|
CB
|
B:LYS37
|
4.5
|
61.4
|
1.0
|
N
|
B:PRO38
|
4.6
|
44.2
|
1.0
|
OG
|
B:SER55
|
4.9
|
40.1
|
1.0
|
|
Chlorine binding site 3 out
of 3 in 4a1h
Go back to
Chlorine Binding Sites List in 4a1h
Chlorine binding site 3 out
of 3 in the Human Myelin P2 Protein, K45S Mutant
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Human Myelin P2 Protein, K45S Mutant within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Cl1133
b:69.1
occ:1.00
|
N
|
C:LYS37
|
3.3
|
52.1
|
1.0
|
O
|
C:LYS37
|
3.4
|
53.7
|
1.0
|
C
|
C:LYS37
|
3.6
|
54.4
|
1.0
|
CB
|
C:SER55
|
3.6
|
57.3
|
1.0
|
OG1
|
C:THR56
|
3.7
|
75.2
|
1.0
|
N
|
C:THR56
|
3.7
|
61.4
|
1.0
|
CA
|
C:SER55
|
3.9
|
55.8
|
1.0
|
CA
|
C:LYS37
|
4.0
|
53.8
|
1.0
|
O
|
C:HOH2001
|
4.1
|
47.0
|
1.0
|
CA
|
C:ALA36
|
4.1
|
54.0
|
1.0
|
C
|
C:ALA36
|
4.1
|
51.1
|
1.0
|
N
|
C:PRO38
|
4.2
|
52.9
|
1.0
|
C
|
C:SER55
|
4.3
|
57.0
|
1.0
|
CB
|
C:LYS37
|
4.5
|
56.9
|
1.0
|
CA
|
C:PRO38
|
4.5
|
50.0
|
1.0
|
CB
|
C:ALA36
|
4.6
|
48.5
|
1.0
|
CB
|
C:THR56
|
4.6
|
70.9
|
1.0
|
CA
|
C:THR56
|
4.8
|
62.0
|
1.0
|
CG2
|
C:THR56
|
4.8
|
71.3
|
1.0
|
OG
|
C:SER55
|
4.8
|
57.7
|
1.0
|
NZ
|
C:LYS9
|
4.9
|
58.5
|
1.0
|
O
|
B:HOH2076
|
5.0
|
68.7
|
1.0
|
O
|
C:LEU35
|
5.0
|
66.6
|
1.0
|
O
|
C:GLU54
|
5.0
|
42.4
|
1.0
|
|
Reference:
M.Lehtimaki,
P.Kursula.
Structure-Function Relationships in the Myelin Peripheral Membrane Protein P2 To Be Published.
Page generated: Sun Jul 21 08:47:31 2024
|