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Chlorine in PDB 4abg: Fragments Bound to Bovine Trypsin For the Sampl Challenge

Enzymatic activity of Fragments Bound to Bovine Trypsin For the Sampl Challenge

All present enzymatic activity of Fragments Bound to Bovine Trypsin For the Sampl Challenge:
3.4.21.4;

Protein crystallography data

The structure of Fragments Bound to Bovine Trypsin For the Sampl Challenge, PDB code: 4abg was solved by J.Newman, T.S.Peat, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.03 / 1.52
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 54.303, 54.303, 106.387, 90.00, 90.00, 120.00
R / Rfree (%) 16.462 / 20.379

Other elements in 4abg:

The structure of Fragments Bound to Bovine Trypsin For the Sampl Challenge also contains other interesting chemical elements:

Calcium (Ca) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Fragments Bound to Bovine Trypsin For the Sampl Challenge (pdb code 4abg). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Fragments Bound to Bovine Trypsin For the Sampl Challenge, PDB code: 4abg:

Chlorine binding site 1 out of 1 in 4abg

Go back to Chlorine Binding Sites List in 4abg
Chlorine binding site 1 out of 1 in the Fragments Bound to Bovine Trypsin For the Sampl Challenge


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Fragments Bound to Bovine Trypsin For the Sampl Challenge within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1247

b:42.9
occ:1.00
OG A:SER236 3.1 21.3 0.3
OG A:SER236 3.4 19.1 0.3
O A:CYS232 3.6 16.8 1.0
O A:ASN233 3.6 15.6 1.0
N A:SER236 3.7 15.2 0.3
N A:SER236 3.7 15.1 0.3
N A:SER236 3.7 15.4 0.3
O A:HOH2141 3.7 21.7 1.0
C A:ASN233 3.9 14.0 1.0
N A:VAL235 3.9 14.6 1.0
CB A:SER236 3.9 17.0 0.3
CB A:SER236 4.0 17.6 0.3
CB A:SER236 4.0 18.2 0.3
N A:TYR234 4.3 13.3 1.0
CA A:ASN233 4.4 13.1 1.0
CA A:VAL235 4.5 16.3 1.0
CA A:SER236 4.5 16.6 0.3
CA A:SER236 4.5 16.4 0.3
CB A:VAL235 4.5 18.8 1.0
CA A:SER236 4.5 16.9 0.3
C A:TYR234 4.6 14.6 1.0
C A:VAL235 4.6 14.3 1.0
C A:CYS232 4.7 13.5 1.0
CA A:TYR234 4.8 13.3 1.0
O A:HOH2142 4.8 23.8 1.0

Reference:

J.Newman, O.Dolezal, V.Fazio, T.Caradoc-Davies, T.S.Peat. The Dingo Dataset: A Comprehensive Set of Data For the Sampl Challenge. J.Comput.Aided Mol.Des. V. 26 497 2012.
ISSN: ISSN 0920-654X
PubMed: 22187139
DOI: 10.1007/S10822-011-9521-2
Page generated: Sun Jul 21 08:59:29 2024

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