Chlorine in PDB 4adg: Crystal Structure of the Rubella Virus Envelope Glycoprotein E1 in Post-Fusion Form (Crystal Form II)

The structure of Crystal Structure of the Rubella Virus Envelope Glycoprotein E1 in Post-Fusion Form (Crystal Form II), PDB code: 4adg was solved by R.M.Dubois, M.C.Vaney, M.A.Tortorici, R.Al Kurdi, G.Barba-Spaeth, F.A.Rey, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	20.00 / 2.18
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	121.680, 126.550, 130.020, 90.00, 90.00, 90.00
R / Rfree (%)	17.79 / 19.34

The structure of Crystal Structure of the Rubella Virus Envelope Glycoprotein E1 in Post-Fusion Form (Crystal Form II) also contains other interesting chemical elements:

Calcium

(Ca)

3 atoms

The binding sites of Chlorine atom in the Crystal Structure of the Rubella Virus Envelope Glycoprotein E1 in Post-Fusion Form (Crystal Form II) (pdb code 4adg). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of the Rubella Virus Envelope Glycoprotein E1 in Post-Fusion Form (Crystal Form II), PDB code: 4adg:

Chlorine binding site 1 out of 1 in the Crystal Structure of the Rubella Virus Envelope Glycoprotein E1 in Post-Fusion Form (Crystal Form II)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Rubella Virus Envelope Glycoprotein E1 in Post-Fusion Form (Crystal Form II) within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl1439 b:47.5 occ:1.00 O A:HOH2002 3.3 60.1 1.0 OE1 C:GLU193 3.5 35.2 1.0 NZ C:LYS327 3.6 76.0 1.0 OE1 B:GLU193 3.6 42.0 1.0 OE1 A:GLU193 3.6 36.8 1.0 NZ A:LYS325 3.7 53.7 1.0 NZ C:LYS325 3.7 58.4 1.0 NZ B:LYS325 3.7 57.6 1.0 NZ B:LYS327 3.7 69.0 1.0 CE A:LYS325 3.7 48.4 1.0 NZ A:LYS327 3.7 76.4 1.0 CE C:LYS325 3.8 52.0 1.0 CE B:LYS325 3.8 51.6 1.0 CE B:LYS327 4.2 61.5 1.0 CE C:LYS327 4.2 67.9 1.0 CE A:LYS327 4.2 68.9 1.0 CD C:GLU193 4.6 43.1 1.0 O A:HOH2217 4.6 31.0 1.0 CD A:GLU193 4.7 47.1 1.0 CD B:GLU193 4.7 49.5 1.0 OE2 C:GLU193 4.9 38.3 1.0

R.M.Dubois, M.C.Vaney, M.A.Tortorici, R.A.Kurdi, G.Barba-Spaeth, T.Krey, F.A.Rey. Functional and Evolutionary Insight From the Crystal Structure of Rubella Virus Protein E1. Nature V. 493 552 2013.
ISSN: ISSN 0028-0836
PubMed: 23292515
DOI: 10.1038/NATURE11741