Atomistry » Chlorine » PDB 4air-4aqa » 4apx
Atomistry »
  Chlorine »
    PDB 4air-4aqa »
      4apx »

Chlorine in PDB 4apx: Crystal Structure of Mouse Cadherin-23 EC1-2 and Protocadherin-15 EC1-2 Form I

Protein crystallography data

The structure of Crystal Structure of Mouse Cadherin-23 EC1-2 and Protocadherin-15 EC1-2 Form I, PDB code: 4apx was solved by M.Sotomayor, W.Weihofen, R.Gaudet, D.P.Corey, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 32.03 / 1.65
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 173.606, 40.469, 84.623, 90.00, 103.12, 90.00
R / Rfree (%) 16.138 / 19.307

Other elements in 4apx:

The structure of Crystal Structure of Mouse Cadherin-23 EC1-2 and Protocadherin-15 EC1-2 Form I also contains other interesting chemical elements:

Potassium (K) 1 atom
Calcium (Ca) 7 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Mouse Cadherin-23 EC1-2 and Protocadherin-15 EC1-2 Form I (pdb code 4apx). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Mouse Cadherin-23 EC1-2 and Protocadherin-15 EC1-2 Form I, PDB code: 4apx:

Chlorine binding site 1 out of 1 in 4apx

Go back to Chlorine Binding Sites List in 4apx
Chlorine binding site 1 out of 1 in the Crystal Structure of Mouse Cadherin-23 EC1-2 and Protocadherin-15 EC1-2 Form I


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Mouse Cadherin-23 EC1-2 and Protocadherin-15 EC1-2 Form I within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1214

b:54.1
occ:0.50
O A:HOH2302 3.1 34.7 1.0
N A:ILE131 3.6 14.9 1.0
O A:HOH2119 3.8 53.8 1.0
CA A:PHE130 4.1 16.1 1.0
C A:PHE130 4.3 15.3 1.0
CD1 A:PHE130 4.3 19.5 1.0
O A:ILE131 4.3 16.4 1.0
CB A:ILE131 4.4 15.2 1.0
CA A:ILE131 4.5 14.8 1.0
CG A:PHE130 4.5 16.6 1.0
CE1 A:PHE130 4.6 20.3 1.0
CG1 A:ILE131 4.6 15.8 1.0
O A:HOH2303 4.8 34.3 1.0
C A:ILE131 4.9 14.6 1.0
CB A:PHE130 4.9 16.8 1.0
O A:ILE129 5.0 17.5 1.0
CD2 A:PHE130 5.0 16.5 1.0

Reference:

M.Sotomayor, W.Weihofen, R.Gaudet, D.P.Corey. Structure of A Force-Conveying Cadherin Bond Essential For Inner-Ear Mechanotransduction Nature V. 492 128 2012.
ISSN: ISSN 0028-0836
PubMed: 23135401
DOI: 10.1038/NATURE11590
Page generated: Sun Jul 21 09:20:38 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy