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Chlorine in PDB 4b7i: Crystal Structure of Human Igg Fc Bearing Hybrid-Type Glycans

Protein crystallography data

The structure of Crystal Structure of Human Igg Fc Bearing Hybrid-Type Glycans, PDB code: 4b7i was solved by T.A.Bowden, K.Baruah, C.H.Coles, D.J.Harvey, B.D.Song, D.I.Stuart, A.R.Aricescu, C.N.Scanlan, E.Y.Jones, M.Crispin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.51 / 2.36
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 49.041, 72.991, 140.833, 90.00, 90.00, 90.00
R / Rfree (%) 21.5 / 26.6

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Human Igg Fc Bearing Hybrid-Type Glycans (pdb code 4b7i). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Human Igg Fc Bearing Hybrid-Type Glycans, PDB code: 4b7i:

Chlorine binding site 1 out of 1 in 4b7i

Go back to Chlorine Binding Sites List in 4b7i
Chlorine binding site 1 out of 1 in the Crystal Structure of Human Igg Fc Bearing Hybrid-Type Glycans


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Human Igg Fc Bearing Hybrid-Type Glycans within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl1445

b:33.0
occ:1.00
OG B:SER254 3.4 37.8 1.0
N B:SER254 3.6 33.4 1.0
CB B:SER254 3.7 34.8 1.0
N B:ILE253 3.8 33.0 1.0
CB B:MET252 3.8 35.7 1.0
CA B:MET252 4.0 34.0 1.0
C B:MET252 4.0 33.1 1.0
CG2 B:ILE253 4.1 35.2 1.0
SD B:MET252 4.2 43.0 1.0
CA B:SER254 4.3 33.5 1.0
CG B:MET252 4.5 37.9 1.0
C B:ILE253 4.6 33.3 1.0
CA B:ILE253 4.6 33.5 1.0
O B:HOH2009 4.7 39.3 1.0
O B:MET252 4.8 32.2 1.0
CB B:ILE253 5.0 34.4 1.0

Reference:

T.A.Bowden, K.Baruah, C.H.Coles, D.J.Harvey, X.Yu, B.D.Song, D.I.Stuart, A.R.Aricescu, C.N.Scanlan, E.Y.Jones, M.Crispin. Chemical and Structural Analysis of An Antibody Folding Intermediate Trapped During Glycan Biosynthesis. J.Am.Chem.Soc. V. 134 17554 2012.
ISSN: ISSN 0002-7863
PubMed: 23025485
DOI: 10.1021/JA306068G
Page generated: Sun Jul 21 09:48:16 2024

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