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Chlorine in PDB 4bm7: Crystal Structure of Igg Fc F241A Mutant with Native Glycosylation

Protein crystallography data

The structure of Crystal Structure of Igg Fc F241A Mutant with Native Glycosylation, PDB code: 4bm7 was solved by X.Yu, K.Baruah, D.J.Harvey, S.Vasiljevic, D.S.Alonzi, B.Song, M.K.Higgins, T.A.Bowden, M.Crispin, C.N.Scanlan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.92 / 1.95
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 48.868, 73.375, 135.951, 90.00, 90.00, 90.00
R / Rfree (%) 19.8 / 23.4

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Igg Fc F241A Mutant with Native Glycosylation (pdb code 4bm7). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Igg Fc F241A Mutant with Native Glycosylation, PDB code: 4bm7:

Chlorine binding site 1 out of 1 in 4bm7

Go back to Chlorine Binding Sites List in 4bm7
Chlorine binding site 1 out of 1 in the Crystal Structure of Igg Fc F241A Mutant with Native Glycosylation


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Igg Fc F241A Mutant with Native Glycosylation within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1451

b:24.0
occ:1.00
OG A:SER254 3.0 31.3 1.0
N A:SER254 3.5 26.0 1.0
CB A:SER254 3.5 29.9 1.0
N A:ILE253 3.8 24.0 1.0
CB A:MET252 3.8 26.2 0.6
CB A:MET252 3.8 24.2 0.4
CG2 A:ILE253 3.8 26.1 0.4
C A:MET252 4.0 23.7 0.4
C A:MET252 4.0 24.4 0.6
CA A:MET252 4.0 24.4 0.6
CA A:MET252 4.0 23.2 0.4
CA A:SER254 4.1 28.6 1.0
CE A:MET252 4.1 28.4 0.4
CE A:MET252 4.2 31.9 0.6
CG1 A:ILE253 4.2 27.5 0.6
C A:ILE253 4.4 25.9 1.0
CG A:MET252 4.5 24.9 0.4
CA A:ILE253 4.5 24.6 0.4
O A:HOH2013 4.5 28.6 1.0
CA A:ILE253 4.6 24.9 0.6
CG A:MET252 4.6 28.0 0.6
SD A:MET252 4.6 30.7 0.6
O A:MET252 4.7 23.9 0.4
O A:MET252 4.7 24.3 0.6
CB A:ILE253 4.7 25.3 0.4
SD A:MET252 5.0 27.8 0.4

Reference:

X.Yu, K.Baruah, D.J.Harvey, S.Vasiljevic, D.S.Alonzi, B.Song, M.K.Higgins, T.A.Bowden, C.N.Scanlan, M.Crispin. Engineering Hydrophobic Protein-Carbohydrate Interactions to Fine-Tune Monoclonal Antibodies. J.Am.Chem.Soc. V. 135 9723 2013.
ISSN: ISSN 0002-7863
PubMed: 23745692
DOI: 10.1021/JA4014375
Page generated: Sun Jul 21 10:18:02 2024

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