Chlorine in PDB 4bmp: Crystal Structure of Bacillus Cereus Ribonucleotide Reductase Di-Iron Nrdf in Complex with Nrdi (2.1 A Resolution)

Enzymatic activity of Crystal Structure of Bacillus Cereus Ribonucleotide Reductase Di-Iron Nrdf in Complex with Nrdi (2.1 A Resolution)

All present enzymatic activity of Crystal Structure of Bacillus Cereus Ribonucleotide Reductase Di-Iron Nrdf in Complex with Nrdi (2.1 A Resolution):
1.17.4.1;

Protein crystallography data

The structure of Crystal Structure of Bacillus Cereus Ribonucleotide Reductase Di-Iron Nrdf in Complex with Nrdi (2.1 A Resolution), PDB code: 4bmp was solved by M.Hammerstad, H.-P.Hersleth, A.K.Rohr, K.K.Andersson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

*Resolution Low / High (Å)*	62.59 / 2.10
*Space group*	C 2 2 2₁
*Cell size a, b, c (Å), α, β, γ (°)*	59.330, 125.030, 142.561, 90.00, 90.00, 90.00
*R / R_free (%)*	17.695 / 23.342

Other elements in 4bmp:

The structure of Crystal Structure of Bacillus Cereus Ribonucleotide Reductase Di-Iron Nrdf in Complex with Nrdi (2.1 A Resolution) also contains other interesting chemical elements:

Iron

(Fe)

2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Bacillus Cereus Ribonucleotide Reductase Di-Iron Nrdf in Complex with Nrdi (2.1 A Resolution) (pdb code 4bmp). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Bacillus Cereus Ribonucleotide Reductase Di-Iron Nrdf in Complex with Nrdi (2.1 A Resolution), PDB code: 4bmp:

Chlorine binding site 1 out of 1 in 4bmp

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Chlorine Binding Sites List in 4bmp

Chlorine binding site 1 out of 1 in the Crystal Structure of Bacillus Cereus Ribonucleotide Reductase Di-Iron Nrdf in Complex with Nrdi (2.1 A Resolution)

Mono view

Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Bacillus Cereus Ribonucleotide Reductase Di-Iron Nrdf in Complex with Nrdi (2.1 A Resolution) within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
A:Cl1325 b:27.4 occ:1.00	O3'	B:FMN1120	3.0	16.1	1.0
	ND2	B:ASN71	3.1	19.2	1.0
	O	A:HOH2060	3.2	25.9	1.0
	O	B:HOH2016	3.3	29.4	1.0
	CD2	B:LEU99	3.4	28.1	1.0
	CG2	A:VAL200	3.6	13.8	1.0
	O	A:HOH2081	3.6	22.4	1.0
	C1'	B:FMN1120	3.6	18.8	1.0
	CB	B:ASN71	3.8	20.5	1.0
	C3'	B:FMN1120	3.9	17.4	1.0
	CG	B:ASN71	4.0	20.7	1.0
	C2'	B:FMN1120	4.3	17.4	1.0
	O	B:HOH2002	4.4	24.0	1.0
	OD1	A:ASN267	4.5	20.1	1.0
	CG	B:LEU99	4.5	26.3	1.0
	CD1	B:LEU99	4.7	30.4	1.0
	CZ3	B:TRP74	4.8	20.0	0.6
	N10	B:FMN1120	4.8	19.0	1.0
	C9	B:FMN1120	4.9	17.3	1.0

Reference:

M.Hammerstad, H.Hersleth, A.B.Tomter, A.K.Rohr, K.K.Andersson. Crystal Structure of Bacillus Cereus Class Ib Ribonucleotide Reductase Di-Iron Nrdf in Complex with Nrdi. Acs Chem.Biol. V. 9 526 2014.
ISSN: ISSN 1554-8929
PubMed: 24295378
DOI: 10.1021/CB400757H

Page generated: Sun Jul 21 10:19:52 2024

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