Atomistry » Chlorine » PDB 4bjy-4bri » 4bpj
Atomistry »
  Chlorine »
    PDB 4bjy-4bri »
      4bpj »

Chlorine in PDB 4bpj: Mcl-1 Bound to Alpha Beta Puma BH3 Peptide 3

Protein crystallography data

The structure of Mcl-1 Bound to Alpha Beta Puma BH3 Peptide 3, PDB code: 4bpj was solved by B.J.Smith, E.F.Lee, J.W.Checco, S.H.Gellman, W.D.Fairlie, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.693 / 1.60
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 78.458, 60.260, 44.804, 90.00, 118.47, 90.00
R / Rfree (%) 19.93 / 23.01

Other elements in 4bpj:

The structure of Mcl-1 Bound to Alpha Beta Puma BH3 Peptide 3 also contains other interesting chemical elements:

Zinc (Zn) 7 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Mcl-1 Bound to Alpha Beta Puma BH3 Peptide 3 (pdb code 4bpj). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the Mcl-1 Bound to Alpha Beta Puma BH3 Peptide 3, PDB code: 4bpj:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in 4bpj

Go back to Chlorine Binding Sites List in 4bpj
Chlorine binding site 1 out of 4 in the Mcl-1 Bound to Alpha Beta Puma BH3 Peptide 3


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Mcl-1 Bound to Alpha Beta Puma BH3 Peptide 3 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1328

b:57.2
occ:1.00
CB A:HIS252 3.9 25.1 1.0
CD2 A:HIS252 3.9 40.0 1.0
CG A:HIS252 4.0 32.2 1.0
CG2 D:ILE90 4.1 41.7 1.0
CB D:DAL91 4.2 18.8 1.0
N D:DAL91 4.3 19.7 1.0
CA D:DAL91 4.3 18.3 1.0
O A:ARG248 4.7 22.7 0.4
CA A:VAL249 4.7 19.1 1.0
CG2 A:VAL249 4.7 20.6 1.0
NE2 A:HIS252 4.9 43.5 1.0

Chlorine binding site 2 out of 4 in 4bpj

Go back to Chlorine Binding Sites List in 4bpj
Chlorine binding site 2 out of 4 in the Mcl-1 Bound to Alpha Beta Puma BH3 Peptide 3


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Mcl-1 Bound to Alpha Beta Puma BH3 Peptide 3 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1329

b:50.3
occ:0.50
CG2 A:THR301 3.9 24.4 1.0
CD1 A:ILE251 4.2 36.5 1.0
NH2 A:ARG300 4.8 59.6 1.0
NE A:ARG300 4.8 53.5 1.0
CG1 A:ILE251 4.8 29.0 1.0

Chlorine binding site 3 out of 4 in 4bpj

Go back to Chlorine Binding Sites List in 4bpj
Chlorine binding site 3 out of 4 in the Mcl-1 Bound to Alpha Beta Puma BH3 Peptide 3


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Mcl-1 Bound to Alpha Beta Puma BH3 Peptide 3 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1330

b:47.3
occ:1.00
CD A:ARG310 4.0 26.1 1.0
NE A:ARG310 4.7 26.4 1.0

Chlorine binding site 4 out of 4 in 4bpj

Go back to Chlorine Binding Sites List in 4bpj
Chlorine binding site 4 out of 4 in the Mcl-1 Bound to Alpha Beta Puma BH3 Peptide 3


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Mcl-1 Bound to Alpha Beta Puma BH3 Peptide 3 within 5.0Å range:

Reference:

B.J.Smith, E.F.Lee, J.W.Checco, M.Evangelista, S.H.Gellman, W.D.Fairlie. Structure-Guided Rational Design of Alpha/Beta-Peptide Foldamers with High Affinity For Bcl-2 Family Prosurvival Proteins. Chembiochem V. 14 1564 2013.
ISSN: ISSN 1439-4227
PubMed: 23929624
DOI: 10.1002/CBIC.201300351
Page generated: Sat Dec 12 10:27:00 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy