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Chlorine in PDB 4bpm: Crystal Structure of A Human Integral Membrane Enzyme

Enzymatic activity of Crystal Structure of A Human Integral Membrane Enzyme

All present enzymatic activity of Crystal Structure of A Human Integral Membrane Enzyme:
5.3.99.3;

Protein crystallography data

The structure of Crystal Structure of A Human Integral Membrane Enzyme, PDB code: 4bpm was solved by D.Li, M.Wang, V.Olieric, M.Caffrey, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.639 / 2.08
Space group H 3 2
Cell size a, b, c (Å), α, β, γ (°) 86.400, 86.400, 181.120, 90.00, 90.00, 120.00
R / Rfree (%) 19.99 / 21.82

Other elements in 4bpm:

The structure of Crystal Structure of A Human Integral Membrane Enzyme also contains other interesting chemical elements:

Fluorine (F) 3 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A Human Integral Membrane Enzyme (pdb code 4bpm). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of A Human Integral Membrane Enzyme, PDB code: 4bpm:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4bpm

Go back to Chlorine Binding Sites List in 4bpm
Chlorine binding site 1 out of 2 in the Crystal Structure of A Human Integral Membrane Enzyme


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Human Integral Membrane Enzyme within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1173

b:65.4
occ:1.00
CL A:LVJ1173 0.0 65.4 1.0
C16 A:LVJ1173 1.7 48.8 1.0
C17 A:LVJ1173 2.7 54.2 1.0
C15 A:LVJ1173 2.7 48.3 1.0
N3 A:LVJ1173 3.0 53.7 1.0
CB A:ALA123 3.6 46.1 1.0
C1 A:LVJ1173 4.0 51.4 1.0
C18 A:LVJ1173 4.0 47.3 1.0
C20 A:LVJ1173 4.0 50.2 1.0
O A:HOH2031 4.0 44.9 1.0
CB A:PRO124 4.3 52.3 1.0
CA A:PRO124 4.3 51.0 1.0
C19 A:LVJ1173 4.5 53.0 1.0
N1 A:LVJ1173 4.7 52.4 1.0
CA A:ALA123 4.7 49.5 1.0
N A:LVJ1173 4.8 49.0 1.0
CB A:SER127 4.8 40.4 1.0
N A:PRO124 5.0 51.4 1.0
C A:LVJ1173 5.0 48.7 1.0

Chlorine binding site 2 out of 2 in 4bpm

Go back to Chlorine Binding Sites List in 4bpm
Chlorine binding site 2 out of 2 in the Crystal Structure of A Human Integral Membrane Enzyme


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A Human Integral Membrane Enzyme within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1173

b:68.6
occ:1.00
CL1 A:LVJ1173 0.0 68.6 1.0
C20 A:LVJ1173 1.7 50.2 1.0
C19 A:LVJ1173 2.7 53.0 1.0
C15 A:LVJ1173 2.7 48.3 1.0
C21 A:LVJ1173 3.0 54.6 1.0
N3 A:LVJ1173 3.0 53.7 1.0
N1 A:LVJ1173 3.1 52.4 1.0
C1 A:LVJ1173 3.2 51.4 1.0
N4 A:LVJ1173 3.3 53.6 1.0
O3 A:LVJ1173 3.5 58.0 1.0
C22 A:LVJ1173 3.5 52.5 1.0
C18 A:LVJ1173 4.0 47.3 1.0
C16 A:LVJ1173 4.0 48.8 1.0
C2 A:LVJ1173 4.1 57.0 1.0
N A:LVJ1173 4.2 49.0 1.0
OG A:SER127 4.4 57.9 1.0
C17 A:LVJ1173 4.5 54.2 1.0
C25 A:LVJ1173 4.5 54.9 1.0
C23 A:LVJ1173 4.5 56.7 1.0
C11 A:LVJ1173 4.7 63.6 1.0
C26 A:LVJ1173 4.9 60.2 1.0
C3 A:LVJ1173 5.0 52.3 1.0

Reference:

D.Li, N.Howe, A.Dukkipati, S.T.A.Shah, B.D.Bax, C.Edge, A.Bridges, P.Hardwicke, O.M.P.Singh, G.Giblin, A.Pautsch, R.Pfau, G.Schnapp, M.Wang, V.Olieric, M.Caffrey. Crystallizing Membrane Proteins in the Lipidic Mesophase. Experience with Human Prostaglandin E2 Synthase 1 and An Evolving Strategy. Cryst.Growth Des. V. 14 2034 2014.
ISSN: ISSN 1528-7483
PubMed: 24803849
DOI: 10.1021/CG500157X
Page generated: Sun Jul 21 10:23:12 2024

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