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Chlorine in PDB 4btl: Aromatic Interactions in Acetylcholinesterase-Inhibitor Complexes

Enzymatic activity of Aromatic Interactions in Acetylcholinesterase-Inhibitor Complexes

All present enzymatic activity of Aromatic Interactions in Acetylcholinesterase-Inhibitor Complexes:
3.1.1.7;

Protein crystallography data

The structure of Aromatic Interactions in Acetylcholinesterase-Inhibitor Complexes, PDB code: 4btl was solved by C.D.Andersson, N.Forsgren, C.Akfur, A.Allgardsson, W.Qian, C.Engdahl, L.Berg, F.Ekstrom, A.Linusson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.813 / 2.50
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 78.671, 110.824, 227.112, 90.00, 90.00, 90.00
R / Rfree (%) 19.08 / 23.16

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Aromatic Interactions in Acetylcholinesterase-Inhibitor Complexes (pdb code 4btl). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the Aromatic Interactions in Acetylcholinesterase-Inhibitor Complexes, PDB code: 4btl:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in 4btl

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Chlorine binding site 1 out of 4 in the Aromatic Interactions in Acetylcholinesterase-Inhibitor Complexes


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Aromatic Interactions in Acetylcholinesterase-Inhibitor Complexes within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1543

b:0.5
occ:0.88
CL A:5GZ1543 0.0 0.5 0.9
C18 A:5GZ1543 1.7 55.1 0.9
C17 A:5GZ1543 2.6 54.1 0.9
C10 A:5GZ1543 2.7 49.3 0.9
O09 A:5GZ1543 3.0 41.1 0.9
OD1 A:ASP74 3.1 77.8 1.0
CE1 A:TYR341 3.2 49.5 1.0
C08 A:5GZ1543 3.2 42.2 0.9
CD1 A:TYR341 3.3 46.7 1.0
O A:HOH2041 3.3 54.5 1.0
C05 A:5GZ1543 3.4 42.5 0.9
OH A:TYR124 3.6 45.8 1.0
CZ A:TYR341 3.7 53.0 1.0
C16 A:5GZ1543 3.9 53.6 0.9
C11 A:5GZ1543 3.9 50.5 0.9
CG A:TYR341 3.9 43.8 1.0
C07 A:5GZ1543 4.0 40.1 0.9
O A:HOH2039 4.2 62.4 1.0
CG A:ASP74 4.2 75.9 1.0
CE2 A:TYR341 4.3 48.9 1.0
OH A:TYR341 4.3 60.1 1.0
C04 A:5GZ1543 4.4 36.3 0.9
O A:HOH2119 4.4 49.1 1.0
CD2 A:TYR341 4.4 38.2 1.0
C15 A:5GZ1543 4.4 46.3 0.9
CZ A:TYR124 4.7 39.5 1.0
CB A:TYR341 4.8 46.8 1.0
C06 A:5GZ1543 4.8 32.9 0.9
CB A:ASP74 4.9 61.1 1.0
CE2 A:TYR72 5.0 52.9 1.0

Chlorine binding site 2 out of 4 in 4btl

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Chlorine binding site 2 out of 4 in the Aromatic Interactions in Acetylcholinesterase-Inhibitor Complexes


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Aromatic Interactions in Acetylcholinesterase-Inhibitor Complexes within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1549

b:86.6
occ:0.84
CL A:5GZ1549 0.0 86.6 0.8
C18 A:5GZ1549 1.7 61.4 0.8
C17 A:5GZ1549 2.6 59.7 0.8
C10 A:5GZ1549 2.7 61.9 0.8
O09 A:5GZ1549 2.9 64.7 0.8
ND1 A:HIS287 3.2 71.9 1.0
C08 A:5GZ1549 3.4 71.7 0.8
C07 A:5GZ1549 3.6 73.0 0.8
O A:TRP286 3.7 39.3 1.0
CE1 A:HIS287 3.8 73.7 1.0
C16 A:5GZ1549 3.9 57.6 0.8
C11 A:5GZ1549 3.9 62.7 0.8
C A:TRP286 4.0 43.2 1.0
CA A:HIS287 4.0 49.5 1.0
N A:HIS287 4.2 51.2 1.0
CG A:HIS287 4.2 63.3 1.0
CB A:TRP286 4.3 35.5 1.0
C05 A:5GZ1549 4.4 72.2 0.8
C15 A:5GZ1549 4.4 57.5 0.8
CB A:HIS287 4.6 52.1 1.0
C06 A:5GZ1549 4.7 70.4 0.8
CA A:TRP286 4.8 37.7 1.0
NE2 A:HIS287 4.9 68.6 1.0
O43 A:PE31546 5.0 68.8 1.0

Chlorine binding site 3 out of 4 in 4btl

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Chlorine binding site 3 out of 4 in the Aromatic Interactions in Acetylcholinesterase-Inhibitor Complexes


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Aromatic Interactions in Acetylcholinesterase-Inhibitor Complexes within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl1544

b:89.5
occ:0.97
CL B:5GZ1544 0.0 89.5 1.0
C18 B:5GZ1544 1.7 69.0 1.0
C17 B:5GZ1544 2.6 72.3 1.0
C10 B:5GZ1544 2.7 65.6 1.0
O09 B:5GZ1544 3.0 56.2 1.0
OD1 B:ASP74 3.1 64.1 1.0
CE1 B:TYR341 3.3 57.2 1.0
CD1 B:TYR341 3.4 54.8 1.0
C08 B:5GZ1544 3.4 53.4 1.0
OH B:TYR124 3.7 51.1 1.0
C05 B:5GZ1544 3.8 52.5 1.0
C16 B:5GZ1544 3.9 80.7 1.0
CZ B:TYR341 3.9 54.0 1.0
C11 B:5GZ1544 4.0 76.4 1.0
CG B:TYR341 4.2 51.4 1.0
CG B:ASP74 4.2 60.5 1.0
C07 B:5GZ1544 4.2 54.6 1.0
C15 B:5GZ1544 4.5 81.0 1.0
O B:HOH2108 4.5 53.9 1.0
OH B:TYR341 4.5 56.8 1.0
CE2 B:TYR72 4.5 55.1 1.0
CE2 B:TYR341 4.6 52.4 1.0
CD2 B:TYR341 4.7 48.1 1.0
CZ B:TYR124 4.7 48.2 1.0
C04 B:5GZ1544 4.8 52.9 1.0
CB B:ASP74 4.9 57.8 1.0
CB B:TYR341 5.0 56.4 1.0

Chlorine binding site 4 out of 4 in 4btl

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Chlorine binding site 4 out of 4 in the Aromatic Interactions in Acetylcholinesterase-Inhibitor Complexes


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Aromatic Interactions in Acetylcholinesterase-Inhibitor Complexes within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl1552

b:0.9
occ:0.85
CL B:5GZ1552 0.0 0.9 0.9
C18 B:5GZ1552 1.7 91.4 0.8
C17 B:5GZ1552 2.6 92.9 0.8
C10 B:5GZ1552 2.7 89.0 0.8
ND1 B:HIS287 3.0 84.2 1.0
O09 B:5GZ1552 3.0 88.8 0.8
C08 B:5GZ1552 3.3 91.5 0.8
O B:TRP286 3.6 63.7 1.0
C05 B:5GZ1552 3.7 96.1 0.8
CE1 B:HIS287 3.7 88.1 1.0
CA B:HIS287 3.8 64.6 1.0
C B:TRP286 3.9 60.3 1.0
C16 B:5GZ1552 3.9 94.6 0.8
C11 B:5GZ1552 4.0 90.1 0.8
N B:HIS287 4.0 63.3 1.0
CG B:HIS287 4.1 81.4 1.0
C07 B:5GZ1552 4.1 93.5 0.8
CB B:HIS287 4.4 73.1 1.0
CB B:TRP286 4.4 59.6 1.0
C15 B:5GZ1552 4.5 92.5 0.8
C04 B:5GZ1552 4.7 0.1 0.9
C B:HIS287 4.8 63.0 1.0
CA B:TRP286 4.8 59.3 1.0
NE2 B:HIS287 4.9 94.9 1.0

Reference:

C.D.Andersson, N.Forsgren, C.Akfur, A.Allgardsson, L.Berg, C.Engdahl, W.Qian, F.J.Ekstrom, A.Linusson. Divergent Structure-Activity Relationships of Structurally Similar Acetylcholinesterase Inhibitors. J.Med.Chem. V. 56 7615 2013.
ISSN: ISSN 0022-2623
PubMed: 23984975
DOI: 10.1021/JM400990P
Page generated: Sun Jul 21 10:32:45 2024

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