Chlorine in PDB 4btl: Aromatic Interactions in Acetylcholinesterase-Inhibitor Complexes
Enzymatic activity of Aromatic Interactions in Acetylcholinesterase-Inhibitor Complexes
All present enzymatic activity of Aromatic Interactions in Acetylcholinesterase-Inhibitor Complexes:
3.1.1.7;
Protein crystallography data
The structure of Aromatic Interactions in Acetylcholinesterase-Inhibitor Complexes, PDB code: 4btl
was solved by
C.D.Andersson,
N.Forsgren,
C.Akfur,
A.Allgardsson,
W.Qian,
C.Engdahl,
L.Berg,
F.Ekstrom,
A.Linusson,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
28.813 /
2.50
|
Space group
|
P 21 21 21
|
Cell size a, b, c (Å), α, β, γ (°)
|
78.671,
110.824,
227.112,
90.00,
90.00,
90.00
|
R / Rfree (%)
|
19.08 /
23.16
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Aromatic Interactions in Acetylcholinesterase-Inhibitor Complexes
(pdb code 4btl). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the
Aromatic Interactions in Acetylcholinesterase-Inhibitor Complexes, PDB code: 4btl:
Jump to Chlorine binding site number:
1;
2;
3;
4;
Chlorine binding site 1 out
of 4 in 4btl
Go back to
Chlorine Binding Sites List in 4btl
Chlorine binding site 1 out
of 4 in the Aromatic Interactions in Acetylcholinesterase-Inhibitor Complexes
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Aromatic Interactions in Acetylcholinesterase-Inhibitor Complexes within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl1543
b:0.5
occ:0.88
|
CL
|
A:5GZ1543
|
0.0
|
0.5
|
0.9
|
C18
|
A:5GZ1543
|
1.7
|
55.1
|
0.9
|
C17
|
A:5GZ1543
|
2.6
|
54.1
|
0.9
|
C10
|
A:5GZ1543
|
2.7
|
49.3
|
0.9
|
O09
|
A:5GZ1543
|
3.0
|
41.1
|
0.9
|
OD1
|
A:ASP74
|
3.1
|
77.8
|
1.0
|
CE1
|
A:TYR341
|
3.2
|
49.5
|
1.0
|
C08
|
A:5GZ1543
|
3.2
|
42.2
|
0.9
|
CD1
|
A:TYR341
|
3.3
|
46.7
|
1.0
|
O
|
A:HOH2041
|
3.3
|
54.5
|
1.0
|
C05
|
A:5GZ1543
|
3.4
|
42.5
|
0.9
|
OH
|
A:TYR124
|
3.6
|
45.8
|
1.0
|
CZ
|
A:TYR341
|
3.7
|
53.0
|
1.0
|
C16
|
A:5GZ1543
|
3.9
|
53.6
|
0.9
|
C11
|
A:5GZ1543
|
3.9
|
50.5
|
0.9
|
CG
|
A:TYR341
|
3.9
|
43.8
|
1.0
|
C07
|
A:5GZ1543
|
4.0
|
40.1
|
0.9
|
O
|
A:HOH2039
|
4.2
|
62.4
|
1.0
|
CG
|
A:ASP74
|
4.2
|
75.9
|
1.0
|
CE2
|
A:TYR341
|
4.3
|
48.9
|
1.0
|
OH
|
A:TYR341
|
4.3
|
60.1
|
1.0
|
C04
|
A:5GZ1543
|
4.4
|
36.3
|
0.9
|
O
|
A:HOH2119
|
4.4
|
49.1
|
1.0
|
CD2
|
A:TYR341
|
4.4
|
38.2
|
1.0
|
C15
|
A:5GZ1543
|
4.4
|
46.3
|
0.9
|
CZ
|
A:TYR124
|
4.7
|
39.5
|
1.0
|
CB
|
A:TYR341
|
4.8
|
46.8
|
1.0
|
C06
|
A:5GZ1543
|
4.8
|
32.9
|
0.9
|
CB
|
A:ASP74
|
4.9
|
61.1
|
1.0
|
CE2
|
A:TYR72
|
5.0
|
52.9
|
1.0
|
|
Chlorine binding site 2 out
of 4 in 4btl
Go back to
Chlorine Binding Sites List in 4btl
Chlorine binding site 2 out
of 4 in the Aromatic Interactions in Acetylcholinesterase-Inhibitor Complexes
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Aromatic Interactions in Acetylcholinesterase-Inhibitor Complexes within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl1549
b:86.6
occ:0.84
|
CL
|
A:5GZ1549
|
0.0
|
86.6
|
0.8
|
C18
|
A:5GZ1549
|
1.7
|
61.4
|
0.8
|
C17
|
A:5GZ1549
|
2.6
|
59.7
|
0.8
|
C10
|
A:5GZ1549
|
2.7
|
61.9
|
0.8
|
O09
|
A:5GZ1549
|
2.9
|
64.7
|
0.8
|
ND1
|
A:HIS287
|
3.2
|
71.9
|
1.0
|
C08
|
A:5GZ1549
|
3.4
|
71.7
|
0.8
|
C07
|
A:5GZ1549
|
3.6
|
73.0
|
0.8
|
O
|
A:TRP286
|
3.7
|
39.3
|
1.0
|
CE1
|
A:HIS287
|
3.8
|
73.7
|
1.0
|
C16
|
A:5GZ1549
|
3.9
|
57.6
|
0.8
|
C11
|
A:5GZ1549
|
3.9
|
62.7
|
0.8
|
C
|
A:TRP286
|
4.0
|
43.2
|
1.0
|
CA
|
A:HIS287
|
4.0
|
49.5
|
1.0
|
N
|
A:HIS287
|
4.2
|
51.2
|
1.0
|
CG
|
A:HIS287
|
4.2
|
63.3
|
1.0
|
CB
|
A:TRP286
|
4.3
|
35.5
|
1.0
|
C05
|
A:5GZ1549
|
4.4
|
72.2
|
0.8
|
C15
|
A:5GZ1549
|
4.4
|
57.5
|
0.8
|
CB
|
A:HIS287
|
4.6
|
52.1
|
1.0
|
C06
|
A:5GZ1549
|
4.7
|
70.4
|
0.8
|
CA
|
A:TRP286
|
4.8
|
37.7
|
1.0
|
NE2
|
A:HIS287
|
4.9
|
68.6
|
1.0
|
O43
|
A:PE31546
|
5.0
|
68.8
|
1.0
|
|
Chlorine binding site 3 out
of 4 in 4btl
Go back to
Chlorine Binding Sites List in 4btl
Chlorine binding site 3 out
of 4 in the Aromatic Interactions in Acetylcholinesterase-Inhibitor Complexes
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Aromatic Interactions in Acetylcholinesterase-Inhibitor Complexes within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl1544
b:89.5
occ:0.97
|
CL
|
B:5GZ1544
|
0.0
|
89.5
|
1.0
|
C18
|
B:5GZ1544
|
1.7
|
69.0
|
1.0
|
C17
|
B:5GZ1544
|
2.6
|
72.3
|
1.0
|
C10
|
B:5GZ1544
|
2.7
|
65.6
|
1.0
|
O09
|
B:5GZ1544
|
3.0
|
56.2
|
1.0
|
OD1
|
B:ASP74
|
3.1
|
64.1
|
1.0
|
CE1
|
B:TYR341
|
3.3
|
57.2
|
1.0
|
CD1
|
B:TYR341
|
3.4
|
54.8
|
1.0
|
C08
|
B:5GZ1544
|
3.4
|
53.4
|
1.0
|
OH
|
B:TYR124
|
3.7
|
51.1
|
1.0
|
C05
|
B:5GZ1544
|
3.8
|
52.5
|
1.0
|
C16
|
B:5GZ1544
|
3.9
|
80.7
|
1.0
|
CZ
|
B:TYR341
|
3.9
|
54.0
|
1.0
|
C11
|
B:5GZ1544
|
4.0
|
76.4
|
1.0
|
CG
|
B:TYR341
|
4.2
|
51.4
|
1.0
|
CG
|
B:ASP74
|
4.2
|
60.5
|
1.0
|
C07
|
B:5GZ1544
|
4.2
|
54.6
|
1.0
|
C15
|
B:5GZ1544
|
4.5
|
81.0
|
1.0
|
O
|
B:HOH2108
|
4.5
|
53.9
|
1.0
|
OH
|
B:TYR341
|
4.5
|
56.8
|
1.0
|
CE2
|
B:TYR72
|
4.5
|
55.1
|
1.0
|
CE2
|
B:TYR341
|
4.6
|
52.4
|
1.0
|
CD2
|
B:TYR341
|
4.7
|
48.1
|
1.0
|
CZ
|
B:TYR124
|
4.7
|
48.2
|
1.0
|
C04
|
B:5GZ1544
|
4.8
|
52.9
|
1.0
|
CB
|
B:ASP74
|
4.9
|
57.8
|
1.0
|
CB
|
B:TYR341
|
5.0
|
56.4
|
1.0
|
|
Chlorine binding site 4 out
of 4 in 4btl
Go back to
Chlorine Binding Sites List in 4btl
Chlorine binding site 4 out
of 4 in the Aromatic Interactions in Acetylcholinesterase-Inhibitor Complexes
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Aromatic Interactions in Acetylcholinesterase-Inhibitor Complexes within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl1552
b:0.9
occ:0.85
|
CL
|
B:5GZ1552
|
0.0
|
0.9
|
0.9
|
C18
|
B:5GZ1552
|
1.7
|
91.4
|
0.8
|
C17
|
B:5GZ1552
|
2.6
|
92.9
|
0.8
|
C10
|
B:5GZ1552
|
2.7
|
89.0
|
0.8
|
ND1
|
B:HIS287
|
3.0
|
84.2
|
1.0
|
O09
|
B:5GZ1552
|
3.0
|
88.8
|
0.8
|
C08
|
B:5GZ1552
|
3.3
|
91.5
|
0.8
|
O
|
B:TRP286
|
3.6
|
63.7
|
1.0
|
C05
|
B:5GZ1552
|
3.7
|
96.1
|
0.8
|
CE1
|
B:HIS287
|
3.7
|
88.1
|
1.0
|
CA
|
B:HIS287
|
3.8
|
64.6
|
1.0
|
C
|
B:TRP286
|
3.9
|
60.3
|
1.0
|
C16
|
B:5GZ1552
|
3.9
|
94.6
|
0.8
|
C11
|
B:5GZ1552
|
4.0
|
90.1
|
0.8
|
N
|
B:HIS287
|
4.0
|
63.3
|
1.0
|
CG
|
B:HIS287
|
4.1
|
81.4
|
1.0
|
C07
|
B:5GZ1552
|
4.1
|
93.5
|
0.8
|
CB
|
B:HIS287
|
4.4
|
73.1
|
1.0
|
CB
|
B:TRP286
|
4.4
|
59.6
|
1.0
|
C15
|
B:5GZ1552
|
4.5
|
92.5
|
0.8
|
C04
|
B:5GZ1552
|
4.7
|
0.1
|
0.9
|
C
|
B:HIS287
|
4.8
|
63.0
|
1.0
|
CA
|
B:TRP286
|
4.8
|
59.3
|
1.0
|
NE2
|
B:HIS287
|
4.9
|
94.9
|
1.0
|
|
Reference:
C.D.Andersson,
N.Forsgren,
C.Akfur,
A.Allgardsson,
L.Berg,
C.Engdahl,
W.Qian,
F.J.Ekstrom,
A.Linusson.
Divergent Structure-Activity Relationships of Structurally Similar Acetylcholinesterase Inhibitors. J.Med.Chem. V. 56 7615 2013.
ISSN: ISSN 0022-2623
PubMed: 23984975
DOI: 10.1021/JM400990P
Page generated: Sun Jul 21 10:32:45 2024
|