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Chlorine in PDB 4byh: Crystal Structure of Sialylated Igg Fc

Protein crystallography data

The structure of Crystal Structure of Sialylated Igg Fc, PDB code: 4byh was solved by M.Crispin, X.Yu, T.A.Bowden, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 66.34 / 2.30
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 153.000, 153.000, 111.850, 90.00, 90.00, 120.00
R / Rfree (%) 22.223 / 26.165

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Sialylated Igg Fc (pdb code 4byh). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Sialylated Igg Fc, PDB code: 4byh:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4byh

Go back to Chlorine Binding Sites List in 4byh
Chlorine binding site 1 out of 2 in the Crystal Structure of Sialylated Igg Fc


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Sialylated Igg Fc within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1455

b:44.2
occ:0.50
O A:HOH2020 3.2 43.0 1.0
N A:HIS310 3.3 53.3 1.0
OE1 A:GLN311 3.3 65.2 1.0
ND1 A:HIS310 3.5 53.6 1.0
CA A:LEU309 3.6 54.9 1.0
CB A:LEU309 4.0 55.2 1.0
C A:LEU309 4.0 54.1 1.0
CB A:HIS310 4.1 53.5 1.0
CG A:HIS310 4.2 53.0 1.0
CD2 A:LEU309 4.2 58.8 1.0
CA A:HIS310 4.3 54.5 1.0
CD A:GLN311 4.5 64.2 1.0
CE1 A:HIS310 4.5 53.8 1.0
CG A:LEU309 4.7 56.3 1.0
O A:VAL308 4.9 56.1 1.0
N A:LEU309 4.9 55.5 1.0

Chlorine binding site 2 out of 2 in 4byh

Go back to Chlorine Binding Sites List in 4byh
Chlorine binding site 2 out of 2 in the Crystal Structure of Sialylated Igg Fc


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Sialylated Igg Fc within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl1455

b:38.6
occ:0.50
O B:HOH2048 3.1 33.8 1.0
N B:HIS310 3.3 34.6 1.0
ND1 B:HIS310 3.3 35.8 1.0
CA B:LEU309 3.7 34.7 1.0
OE1 B:GLN311 3.9 35.8 1.0
C B:LEU309 4.0 34.3 1.0
CB B:LEU309 4.1 34.9 1.0
CB B:HIS310 4.2 34.9 1.0
CG B:HIS310 4.2 35.2 1.0
CD2 B:LEU309 4.2 35.6 1.0
CE1 B:HIS310 4.3 36.1 1.0
CA B:HIS310 4.4 34.5 1.0
CD B:GLN311 4.7 35.8 1.0
NE2 B:GLN311 4.7 36.1 1.0
O B:VAL308 4.8 35.2 1.0
CG B:LEU309 4.8 35.3 1.0
N B:LEU309 4.9 34.5 1.0

Reference:

M.Crispin, X.Yu, T.A.Bowden. Crystal Structure of Sialylated Igg Fc: Implications For the Mechanism of Intravenous Immunoglobulin Therapy. Proc.Natl.Acad.Sci.Usa V. 110 E3544 2013.
ISSN: ISSN 0027-8424
PubMed: 23929778
DOI: 10.1073/PNAS.1310657110
Page generated: Sat Dec 12 10:27:51 2020

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