Atomistry » Chlorine » PDB 4bri-4bzr » 4bz1
Atomistry »
  Chlorine »
    PDB 4bri-4bzr »
      4bz1 »

Chlorine in PDB 4bz1: Structure of Dengue Virus Ediii in Complex with Fab 3E31

Protein crystallography data

The structure of Structure of Dengue Virus Ediii in Complex with Fab 3E31, PDB code: 4bz1 was solved by J.Li, D.Watterson, C.W.Chang, X.Q.Li, D.J.Ericsson, L.W.Qiu, J.P.Cai, J.Chen, S.R.Fry, M.A.Cooper, X.Y.Che, P.R.Young, B.Kobe, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 53.504 / 2.15
Space group P 2 21 21
Cell size a, b, c (Å), α, β, γ (°) 39.802, 107.009, 134.896, 90.00, 90.00, 90.00
R / Rfree (%) 22.34 / 25.46

Other elements in 4bz1:

The structure of Structure of Dengue Virus Ediii in Complex with Fab 3E31 also contains other interesting chemical elements:

Zinc (Zn) 1 atom
Sodium (Na) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of Dengue Virus Ediii in Complex with Fab 3E31 (pdb code 4bz1). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structure of Dengue Virus Ediii in Complex with Fab 3E31, PDB code: 4bz1:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4bz1

Go back to Chlorine Binding Sites List in 4bz1
Chlorine binding site 1 out of 2 in the Structure of Dengue Virus Ediii in Complex with Fab 3E31


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Dengue Virus Ediii in Complex with Fab 3E31 within 5.0Å range:
probe atom residue distance (Å) B Occ
L:Cl220

b:62.5
occ:0.98
ZN L:ZN219 2.1 32.5 0.7
OE2 L:GLU191 3.0 51.8 1.0
HE1 L:HIS195 3.4 49.6 1.0
CL L:CL221 3.5 35.0 0.6
NE2 L:HIS195 3.5 40.5 1.0
HH21 L:ARG161 3.6 49.4 1.0
HH22 L:ARG161 3.6 49.4 1.0
CE1 L:HIS195 3.8 41.4 1.0
OE1 L:GLU191 3.8 72.3 1.0
CD L:GLU191 3.9 58.2 1.0
NH2 L:ARG161 3.9 41.2 1.0
CD2 L:HIS195 4.8 36.6 1.0

Chlorine binding site 2 out of 2 in 4bz1

Go back to Chlorine Binding Sites List in 4bz1
Chlorine binding site 2 out of 2 in the Structure of Dengue Virus Ediii in Complex with Fab 3E31


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of Dengue Virus Ediii in Complex with Fab 3E31 within 5.0Å range:
probe atom residue distance (Å) B Occ
L:Cl221

b:35.0
occ:0.60
OE1 L:GLU191 1.8 72.3 1.0
ZN L:ZN219 2.1 32.5 0.7
CD L:GLU191 2.9 58.2 1.0
HD2 L:ARG194 3.1 51.6 1.0
OE2 L:GLU191 3.4 51.8 1.0
NE2 L:HIS195 3.4 40.5 1.0
CL L:CL220 3.5 62.5 1.0
HA L:GLU191 3.6 42.7 1.0
HB2 L:ARG194 3.7 44.9 1.0
HD3 L:ARG194 3.8 51.6 1.0
CD L:ARG194 3.9 43.0 1.0
HD2 L:HIS195 4.0 43.9 1.0
CD2 L:HIS195 4.1 36.6 1.0
HB2 L:GLU191 4.2 48.0 1.0
CG L:GLU191 4.2 48.6 1.0
HB3 L:ARG194 4.2 44.9 1.0
CB L:ARG194 4.3 37.5 1.0
CE1 L:HIS195 4.4 41.4 1.0
CA L:GLU191 4.5 35.5 1.0
CB L:GLU191 4.5 40.0 1.0
HG3 L:GLU191 4.6 58.3 1.0
HE1 L:HIS195 4.6 49.6 1.0
CG L:ARG194 4.7 38.7 1.0
O L:GLU191 4.8 32.3 1.0
HG2 L:GLU191 4.9 58.3 1.0
NE L:ARG194 4.9 42.5 1.0
HE L:ARG194 5.0 51.0 1.0

Reference:

J.Li, D.Watterson, C.W.Chang, X.Q.Li, D.J.Ericsson, L.W.Qiu, J.P.Cai, J.Chen, S.R.Fry, M.A.Cooper, X.Y.Che, P.R.Young, B.Kobe. Structure of Dengue Virus Ediii in Complex with Fab 3E31 To Be Published.
Page generated: Sat Dec 12 10:27:55 2020

Last articles

Zn in 7VD8
Zn in 7V1R
Zn in 7V1Q
Zn in 7VPF
Zn in 7T85
Zn in 7T5F
Zn in 7NF9
Zn in 7M4M
Zn in 7M4O
Zn in 7M4N
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy