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Chlorine in PDB 4cc4: Complex of Inlc of Listeria Monocytogenes and Human Tuba C- Terminal SH3 Domain

Protein crystallography data

The structure of Complex of Inlc of Listeria Monocytogenes and Human Tuba C- Terminal SH3 Domain, PDB code: 4cc4 was solved by L.Polle, L.Rigano, R.Julian, K.Ireton, W.-D.Schubert, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 14.97 / 2.60
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 89.702, 101.750, 126.881, 90.00, 90.00, 90.00
R / Rfree (%) 19.584 / 26.187

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Complex of Inlc of Listeria Monocytogenes and Human Tuba C- Terminal SH3 Domain (pdb code 4cc4). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 6 binding sites of Chlorine where determined in the Complex of Inlc of Listeria Monocytogenes and Human Tuba C- Terminal SH3 Domain, PDB code: 4cc4:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6;

Chlorine binding site 1 out of 6 in 4cc4

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Chlorine binding site 1 out of 6 in the Complex of Inlc of Listeria Monocytogenes and Human Tuba C- Terminal SH3 Domain


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Complex of Inlc of Listeria Monocytogenes and Human Tuba C- Terminal SH3 Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1299

b:72.5
occ:1.00
OE2 A:GLU195 3.4 36.7 1.0
NH1 A:ARG153 3.5 54.1 1.0
NZ A:LYS173 3.6 52.8 1.0
NH2 A:ARG153 3.9 54.9 1.0
CZ A:ARG153 4.2 53.8 1.0
CD A:GLU195 4.2 36.2 1.0
OE1 A:GLU195 4.3 39.4 1.0
CD A:LYS173 4.4 46.4 1.0
CE A:LYS173 4.6 49.6 1.0
CG A:LYS173 4.7 42.4 1.0

Chlorine binding site 2 out of 6 in 4cc4

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Chlorine binding site 2 out of 6 in the Complex of Inlc of Listeria Monocytogenes and Human Tuba C- Terminal SH3 Domain


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Complex of Inlc of Listeria Monocytogenes and Human Tuba C- Terminal SH3 Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl1303

b:63.8
occ:1.00
OD1 C:ASN79 3.0 55.8 1.0
CD2 C:HIS103 3.4 42.6 1.0
NE2 C:HIS103 3.4 42.7 1.0
CG C:ASN79 3.7 54.0 1.0
ND2 C:ASN79 3.8 56.3 1.0
OE2 D:GLU1553 3.9 40.2 1.0
ND2 C:ASN81 3.9 40.1 1.0
CG C:HIS103 4.3 40.3 1.0
CE1 C:HIS103 4.3 41.1 1.0
CB C:ASN81 4.3 41.6 1.0
CG C:ASN81 4.6 41.2 1.0
ND1 C:HIS103 4.7 40.4 1.0
CD D:GLU1553 4.7 38.0 1.0
OE1 D:GLU1553 4.8 40.4 1.0

Chlorine binding site 3 out of 6 in 4cc4

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Chlorine binding site 3 out of 6 in the Complex of Inlc of Listeria Monocytogenes and Human Tuba C- Terminal SH3 Domain


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Complex of Inlc of Listeria Monocytogenes and Human Tuba C- Terminal SH3 Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl1304

b:70.0
occ:1.00
NZ C:LYS173 3.1 57.9 1.0
OE2 C:GLU195 3.4 38.8 1.0
NH2 C:ARG153 3.8 56.5 1.0
NH1 C:ARG153 3.8 52.6 1.0
CD C:GLU195 4.3 38.3 1.0
CZ C:ARG153 4.3 54.2 1.0
CE C:LYS173 4.4 55.0 1.0
OE1 C:GLU195 4.4 40.6 1.0
CG C:LYS173 4.7 46.5 1.0

Chlorine binding site 4 out of 6 in 4cc4

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Chlorine binding site 4 out of 6 in the Complex of Inlc of Listeria Monocytogenes and Human Tuba C- Terminal SH3 Domain


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Complex of Inlc of Listeria Monocytogenes and Human Tuba C- Terminal SH3 Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl2579

b:71.2
occ:1.00
NH1 D:ARG1527 3.0 51.1 0.5
O D:LYS1525 3.3 48.5 1.0
N D:LYS1525 3.5 45.8 1.0
CB D:LYS1525 3.6 54.0 1.0
O D:HOH2017 3.9 55.2 1.0
CA D:LYS1525 4.0 50.1 1.0
C D:LYS1525 4.1 49.0 1.0
CZ D:ARG1527 4.1 51.5 0.5
CD D:ARG1527 4.1 50.1 0.5
CD1 D:PHE1524 4.1 38.6 1.0
CE1 D:PHE1524 4.3 38.5 1.0
NE D:ARG1527 4.5 51.4 0.5
C D:PHE1524 4.6 43.1 1.0
CG D:ARG1527 4.6 53.2 0.5
CA D:PHE1524 4.8 40.5 1.0
CG D:LYS1525 4.9 59.1 1.0
CD D:LYS1525 5.0 62.4 1.0

Chlorine binding site 5 out of 6 in 4cc4

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Chlorine binding site 5 out of 6 in the Complex of Inlc of Listeria Monocytogenes and Human Tuba C- Terminal SH3 Domain


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Complex of Inlc of Listeria Monocytogenes and Human Tuba C- Terminal SH3 Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Cl2579

b:69.5
occ:1.00
OH F:TYR1576 3.1 42.0 1.0
O E:HOH2051 3.7 37.7 1.0
CZ F:TYR1576 4.1 40.9 1.0
CE2 F:TYR1576 4.3 41.4 1.0
CD F:PRO1512 4.7 38.9 1.0

Chlorine binding site 6 out of 6 in 4cc4

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Chlorine binding site 6 out of 6 in the Complex of Inlc of Listeria Monocytogenes and Human Tuba C- Terminal SH3 Domain


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Complex of Inlc of Listeria Monocytogenes and Human Tuba C- Terminal SH3 Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Cl2580

b:69.4
occ:1.00
CD2 F:TYR1565 4.3 68.6 1.0
OE2 F:GLU1531 4.4 60.6 1.0
CE2 F:TRP1554 4.4 56.7 1.0
CD2 F:TRP1554 4.4 56.3 1.0
CB F:TYR1565 4.5 60.6 1.0
CG F:TYR1565 4.6 63.6 1.0
NE1 F:TRP1554 4.6 57.9 1.0
CG F:TRP1554 4.6 57.2 1.0
CD1 F:TRP1554 4.7 58.0 1.0
CZ2 F:TRP1554 4.9 56.4 1.0
CE3 F:TRP1554 4.9 54.8 1.0
CG F:GLU1531 5.0 59.5 1.0

Reference:

L.Polle, L.A.Rigano, R.Julian, K.Ireton, W.Schubert. Structural Details of Human Tuba Recruitment By Inlc of Listeria Monocytogenes Elucidate Bacterial Cell-Cell Spreading. Structure V. 22 304 2014.
ISSN: ISSN 0969-2126
PubMed: 24332715
DOI: 10.1016/J.STR.2013.10.017
Page generated: Sun Jul 21 11:01:31 2024

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