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Chlorine in PDB 4cdu: Crystal Structure of Human Enterovirus 71 in Complex with the Uncoating Inhibitor GPP3

Protein crystallography data

The structure of Crystal Structure of Human Enterovirus 71 in Complex with the Uncoating Inhibitor GPP3, PDB code: 4cdu was solved by L.De Colibus, X.Wang, J.A.B.Spyrou, J.Kelly, J.Ren, J.Grimes, G.Puerstinger, N.Stonehouse, T.S.Walter, Z.Hu, J.Wang, X.Li, W.Peng, D.Rowlands, E.E.Fry, Z.Rao, D.I.Stuart, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.97 / 2.80
Space group I 2 3
Cell size a, b, c (Å), α, β, γ (°) 599.681, 599.681, 599.681, 90.00, 90.00, 90.00
R / Rfree (%) 27.8 / 28.2

Other elements in 4cdu:

The structure of Crystal Structure of Human Enterovirus 71 in Complex with the Uncoating Inhibitor GPP3 also contains other interesting chemical elements:

Sodium (Na) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Human Enterovirus 71 in Complex with the Uncoating Inhibitor GPP3 (pdb code 4cdu). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Human Enterovirus 71 in Complex with the Uncoating Inhibitor GPP3, PDB code: 4cdu:

Chlorine binding site 1 out of 1 in 4cdu

Go back to Chlorine Binding Sites List in 4cdu
Chlorine binding site 1 out of 1 in the Crystal Structure of Human Enterovirus 71 in Complex with the Uncoating Inhibitor GPP3


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Human Enterovirus 71 in Complex with the Uncoating Inhibitor GPP3 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl1255

b:27.9
occ:1.00
N B:GLY90 3.1 9.1 1.0
CA B:GLY90 3.7 9.4 1.0
C B:THR89 4.1 12.3 1.0
CA B:THR89 4.2 12.1 1.0
O B:GLU88 4.5 15.8 1.0
CG2 B:THR89 4.6 6.9 1.0
C B:GLY90 4.8 10.6 1.0

Reference:

L.De Colibus, X.Wang, J.A.B.Spyrou, J.Kelly, J.Ren, J.Grimes, G.Puerstinger, N.Stonehouse, T.S.Walter, Z.Hu, J.Wang, X.Li, W.Peng, D.J.Rowlands, E.E.Fry, Z.Rao, D.I.Stuart. More-Powerful Virus Inhibitors From Structure-Based Analysis of HEV71 Capsid-Binding Molecules Nat.Struct.Mol.Biol. V. 21 282 2014.
ISSN: ISSN 1545-9993
PubMed: 24509833
DOI: 10.1038/NSMB.2769
Page generated: Sat Dec 12 10:29:09 2020

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