Chlorine in PDB 4cl6: Crystal Structure of 3-Hydroxydecanoyl-Acyl Carrier Protein Dehydratase (Faba) From Pseudomonas Aeruginosa in Complex with N-(4-Chlorobenzyl)-3-(2-Furyl)-1H-1,2,4-Triazol-5- Amine
Enzymatic activity of Crystal Structure of 3-Hydroxydecanoyl-Acyl Carrier Protein Dehydratase (Faba) From Pseudomonas Aeruginosa in Complex with N-(4-Chlorobenzyl)-3-(2-Furyl)-1H-1,2,4-Triazol-5- Amine
All present enzymatic activity of Crystal Structure of 3-Hydroxydecanoyl-Acyl Carrier Protein Dehydratase (Faba) From Pseudomonas Aeruginosa in Complex with N-(4-Chlorobenzyl)-3-(2-Furyl)-1H-1,2,4-Triazol-5- Amine:
4.2.1.59;
4.2.1.60;
5.3.3.14;
Protein crystallography data
The structure of Crystal Structure of 3-Hydroxydecanoyl-Acyl Carrier Protein Dehydratase (Faba) From Pseudomonas Aeruginosa in Complex with N-(4-Chlorobenzyl)-3-(2-Furyl)-1H-1,2,4-Triazol-5- Amine, PDB code: 4cl6
was solved by
L.Moynie,
S.A.Mcmahon,
F.G.Duthie,
J.H.Naismith,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
43.51 /
2.41
|
Space group
|
C 1 2 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
115.610,
142.870,
77.850,
90.00,
116.47,
90.00
|
R / Rfree (%)
|
18.201 /
21.169
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Crystal Structure of 3-Hydroxydecanoyl-Acyl Carrier Protein Dehydratase (Faba) From Pseudomonas Aeruginosa in Complex with N-(4-Chlorobenzyl)-3-(2-Furyl)-1H-1,2,4-Triazol-5- Amine
(pdb code 4cl6). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 5 binding sites of Chlorine where determined in the
Crystal Structure of 3-Hydroxydecanoyl-Acyl Carrier Protein Dehydratase (Faba) From Pseudomonas Aeruginosa in Complex with N-(4-Chlorobenzyl)-3-(2-Furyl)-1H-1,2,4-Triazol-5- Amine, PDB code: 4cl6:
Jump to Chlorine binding site number:
1;
2;
3;
4;
5;
Chlorine binding site 1 out
of 5 in 4cl6
Go back to
Chlorine Binding Sites List in 4cl6
Chlorine binding site 1 out
of 5 in the Crystal Structure of 3-Hydroxydecanoyl-Acyl Carrier Protein Dehydratase (Faba) From Pseudomonas Aeruginosa in Complex with N-(4-Chlorobenzyl)-3-(2-Furyl)-1H-1,2,4-Triazol-5- Amine
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Crystal Structure of 3-Hydroxydecanoyl-Acyl Carrier Protein Dehydratase (Faba) From Pseudomonas Aeruginosa in Complex with N-(4-Chlorobenzyl)-3-(2-Furyl)-1H-1,2,4-Triazol-5- Amine within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl501
b:44.8
occ:1.00
|
CL
|
A:7SB501
|
0.0
|
44.8
|
1.0
|
CAO
|
A:7SB501
|
1.9
|
36.9
|
1.0
|
CAE
|
A:7SB501
|
2.8
|
33.1
|
1.0
|
CAF
|
A:7SB501
|
2.9
|
34.8
|
1.0
|
N
|
B:LEU28
|
3.4
|
33.2
|
1.0
|
C
|
B:GLN27
|
3.4
|
33.2
|
1.0
|
O
|
B:GLN27
|
3.5
|
32.1
|
1.0
|
N
|
B:PHE92
|
3.7
|
29.6
|
1.0
|
CD2
|
B:LEU28
|
3.7
|
33.0
|
1.0
|
CA
|
B:LEU28
|
3.8
|
31.8
|
1.0
|
CB
|
B:ALA26
|
3.8
|
37.0
|
1.0
|
CA
|
B:PHE92
|
3.8
|
29.7
|
1.0
|
CG
|
B:LEU28
|
3.9
|
32.5
|
1.0
|
N
|
B:GLN27
|
4.0
|
36.6
|
1.0
|
C
|
B:GLY91
|
4.0
|
28.6
|
1.0
|
CAG
|
A:7SB501
|
4.1
|
29.9
|
1.0
|
CAH
|
A:7SB501
|
4.2
|
37.3
|
1.0
|
CA
|
B:GLN27
|
4.2
|
37.4
|
1.0
|
C
|
B:ALA26
|
4.3
|
36.5
|
1.0
|
O
|
B:GLN88
|
4.3
|
27.4
|
1.0
|
CB
|
B:PHE92
|
4.3
|
29.3
|
1.0
|
O
|
B:GLY91
|
4.4
|
27.6
|
1.0
|
CB
|
B:LEU28
|
4.4
|
33.7
|
1.0
|
CA
|
B:ALA26
|
4.6
|
39.3
|
1.0
|
CA
|
B:GLY91
|
4.6
|
27.8
|
1.0
|
CAP
|
A:7SB501
|
4.7
|
32.9
|
1.0
|
SG
|
B:CYS15
|
4.8
|
42.1
|
1.0
|
CD2
|
B:PHE92
|
4.8
|
31.6
|
1.0
|
O
|
B:ALA26
|
4.8
|
37.5
|
1.0
|
|
Chlorine binding site 2 out
of 5 in 4cl6
Go back to
Chlorine Binding Sites List in 4cl6
Chlorine binding site 2 out
of 5 in the Crystal Structure of 3-Hydroxydecanoyl-Acyl Carrier Protein Dehydratase (Faba) From Pseudomonas Aeruginosa in Complex with N-(4-Chlorobenzyl)-3-(2-Furyl)-1H-1,2,4-Triazol-5- Amine
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Crystal Structure of 3-Hydroxydecanoyl-Acyl Carrier Protein Dehydratase (Faba) From Pseudomonas Aeruginosa in Complex with N-(4-Chlorobenzyl)-3-(2-Furyl)-1H-1,2,4-Triazol-5- Amine within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl501
b:48.8
occ:1.00
|
CL
|
B:7SB501
|
0.0
|
48.8
|
1.0
|
CAO
|
B:7SB501
|
1.8
|
38.6
|
1.0
|
CAE
|
B:7SB501
|
2.8
|
35.9
|
1.0
|
CAF
|
B:7SB501
|
2.8
|
33.1
|
1.0
|
C
|
A:GLN27
|
3.5
|
35.5
|
1.0
|
N
|
A:LEU28
|
3.5
|
36.0
|
1.0
|
N
|
A:PHE92
|
3.5
|
29.7
|
1.0
|
O
|
A:GLN27
|
3.5
|
37.1
|
1.0
|
CA
|
A:PHE92
|
3.7
|
29.9
|
1.0
|
CD2
|
A:LEU28
|
3.7
|
32.1
|
1.0
|
CB
|
A:ALA26
|
3.8
|
36.1
|
1.0
|
C
|
A:GLY91
|
3.9
|
27.1
|
1.0
|
CG
|
A:LEU28
|
3.9
|
36.7
|
1.0
|
N
|
A:GLN27
|
3.9
|
36.8
|
1.0
|
CA
|
A:LEU28
|
3.9
|
35.4
|
1.0
|
CAG
|
B:7SB501
|
4.1
|
33.5
|
1.0
|
CAH
|
B:7SB501
|
4.1
|
40.2
|
1.0
|
CB
|
A:PHE92
|
4.2
|
30.2
|
1.0
|
CA
|
A:GLN27
|
4.2
|
37.8
|
1.0
|
O
|
A:GLN88
|
4.2
|
32.4
|
1.0
|
C
|
A:ALA26
|
4.2
|
38.2
|
1.0
|
O
|
A:GLY91
|
4.3
|
31.6
|
1.0
|
CA
|
A:GLY91
|
4.5
|
27.1
|
1.0
|
CB
|
A:LEU28
|
4.5
|
36.8
|
1.0
|
CA
|
A:ALA26
|
4.6
|
36.4
|
1.0
|
CAP
|
B:7SB501
|
4.6
|
29.9
|
1.0
|
CD2
|
A:PHE92
|
4.8
|
30.9
|
1.0
|
SG
|
A:CYS15
|
4.8
|
36.6
|
1.0
|
O
|
A:ALA26
|
4.8
|
36.5
|
1.0
|
CG
|
A:PHE92
|
5.0
|
30.9
|
1.0
|
|
Chlorine binding site 3 out
of 5 in 4cl6
Go back to
Chlorine Binding Sites List in 4cl6
Chlorine binding site 3 out
of 5 in the Crystal Structure of 3-Hydroxydecanoyl-Acyl Carrier Protein Dehydratase (Faba) From Pseudomonas Aeruginosa in Complex with N-(4-Chlorobenzyl)-3-(2-Furyl)-1H-1,2,4-Triazol-5- Amine
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Crystal Structure of 3-Hydroxydecanoyl-Acyl Carrier Protein Dehydratase (Faba) From Pseudomonas Aeruginosa in Complex with N-(4-Chlorobenzyl)-3-(2-Furyl)-1H-1,2,4-Triazol-5- Amine within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Cl501
b:55.2
occ:1.00
|
CL
|
C:7SB501
|
0.0
|
55.2
|
1.0
|
CAO
|
C:7SB501
|
1.8
|
50.9
|
1.0
|
CAF
|
C:7SB501
|
2.7
|
40.0
|
1.0
|
CAE
|
C:7SB501
|
2.7
|
41.2
|
1.0
|
N
|
D:PHE92
|
3.5
|
30.6
|
1.0
|
O
|
D:GLN27
|
3.6
|
42.3
|
1.0
|
C
|
D:GLN27
|
3.6
|
40.3
|
1.0
|
N
|
D:LEU28
|
3.7
|
36.7
|
1.0
|
CD2
|
D:LEU28
|
3.7
|
33.7
|
1.0
|
CA
|
D:PHE92
|
3.8
|
31.6
|
1.0
|
C
|
D:GLY91
|
3.8
|
32.4
|
1.0
|
CB
|
D:ALA26
|
3.9
|
43.6
|
1.0
|
CA
|
D:LEU28
|
4.0
|
36.5
|
1.0
|
CG
|
D:LEU28
|
4.0
|
33.5
|
1.0
|
CAH
|
C:7SB501
|
4.0
|
39.8
|
1.0
|
CAG
|
C:7SB501
|
4.0
|
42.8
|
1.0
|
N
|
D:GLN27
|
4.1
|
41.2
|
1.0
|
O
|
D:GLN88
|
4.2
|
30.0
|
1.0
|
O
|
D:GLY91
|
4.3
|
32.2
|
1.0
|
CB
|
D:PHE92
|
4.3
|
32.7
|
1.0
|
CA
|
D:GLY91
|
4.3
|
31.3
|
1.0
|
CA
|
D:GLN27
|
4.4
|
40.7
|
1.0
|
C
|
D:ALA26
|
4.4
|
44.9
|
1.0
|
CAP
|
C:7SB501
|
4.5
|
45.7
|
1.0
|
CB
|
D:LEU28
|
4.6
|
35.1
|
1.0
|
CA
|
D:ALA26
|
4.7
|
43.1
|
1.0
|
O
|
D:HOH2009
|
4.8
|
30.0
|
1.0
|
CD2
|
D:PHE92
|
5.0
|
33.9
|
1.0
|
O
|
D:ALA26
|
5.0
|
43.3
|
1.0
|
|
Chlorine binding site 4 out
of 5 in 4cl6
Go back to
Chlorine Binding Sites List in 4cl6
Chlorine binding site 4 out
of 5 in the Crystal Structure of 3-Hydroxydecanoyl-Acyl Carrier Protein Dehydratase (Faba) From Pseudomonas Aeruginosa in Complex with N-(4-Chlorobenzyl)-3-(2-Furyl)-1H-1,2,4-Triazol-5- Amine
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Crystal Structure of 3-Hydroxydecanoyl-Acyl Carrier Protein Dehydratase (Faba) From Pseudomonas Aeruginosa in Complex with N-(4-Chlorobenzyl)-3-(2-Furyl)-1H-1,2,4-Triazol-5- Amine within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Cl501
b:51.3
occ:1.00
|
CL
|
D:7SB501
|
0.0
|
51.3
|
1.0
|
CAO
|
D:7SB501
|
1.8
|
39.4
|
1.0
|
CAE
|
D:7SB501
|
2.8
|
37.4
|
1.0
|
CAF
|
D:7SB501
|
2.8
|
38.0
|
1.0
|
C
|
C:GLN27
|
3.4
|
33.5
|
1.0
|
O
|
C:GLN27
|
3.4
|
31.4
|
1.0
|
N
|
C:LEU28
|
3.4
|
32.8
|
1.0
|
N
|
C:PHE92
|
3.6
|
35.0
|
1.0
|
CD2
|
C:LEU28
|
3.7
|
33.1
|
1.0
|
CA
|
C:PHE92
|
3.8
|
35.9
|
1.0
|
CA
|
C:LEU28
|
3.8
|
31.2
|
1.0
|
C
|
C:GLY91
|
3.9
|
40.9
|
1.0
|
CB
|
C:ALA26
|
3.9
|
42.3
|
1.0
|
CG
|
C:LEU28
|
3.9
|
35.5
|
1.0
|
N
|
C:GLN27
|
3.9
|
38.1
|
1.0
|
CAG
|
D:7SB501
|
4.1
|
32.8
|
1.0
|
CAH
|
D:7SB501
|
4.1
|
43.3
|
1.0
|
CA
|
C:GLN27
|
4.2
|
36.7
|
1.0
|
O
|
C:GLN88
|
4.2
|
30.2
|
1.0
|
C
|
C:ALA26
|
4.3
|
40.9
|
1.0
|
CB
|
C:PHE92
|
4.3
|
33.7
|
1.0
|
O
|
C:GLY91
|
4.4
|
44.3
|
1.0
|
CA
|
C:GLY91
|
4.4
|
40.3
|
1.0
|
CB
|
C:LEU28
|
4.5
|
33.6
|
1.0
|
CAP
|
D:7SB501
|
4.6
|
39.0
|
1.0
|
CA
|
C:ALA26
|
4.6
|
41.2
|
1.0
|
SG
|
C:CYS15
|
4.8
|
32.5
|
1.0
|
O
|
C:ALA26
|
4.9
|
47.4
|
1.0
|
CD2
|
C:PHE92
|
4.9
|
33.5
|
1.0
|
|
Chlorine binding site 5 out
of 5 in 4cl6
Go back to
Chlorine Binding Sites List in 4cl6
Chlorine binding site 5 out
of 5 in the Crystal Structure of 3-Hydroxydecanoyl-Acyl Carrier Protein Dehydratase (Faba) From Pseudomonas Aeruginosa in Complex with N-(4-Chlorobenzyl)-3-(2-Furyl)-1H-1,2,4-Triazol-5- Amine
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 5 of Crystal Structure of 3-Hydroxydecanoyl-Acyl Carrier Protein Dehydratase (Faba) From Pseudomonas Aeruginosa in Complex with N-(4-Chlorobenzyl)-3-(2-Furyl)-1H-1,2,4-Triazol-5- Amine within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Cl501
b:56.6
occ:1.00
|
CL
|
E:7SB501
|
0.0
|
56.6
|
1.0
|
CAO
|
E:7SB501
|
1.7
|
44.5
|
1.0
|
CAE
|
E:7SB501
|
2.7
|
49.5
|
1.0
|
CAF
|
E:7SB501
|
2.7
|
53.1
|
1.0
|
CAG
|
E:7SB501
|
4.0
|
46.3
|
1.0
|
CAH
|
E:7SB501
|
4.0
|
51.5
|
1.0
|
CAP
|
E:7SB501
|
4.5
|
44.2
|
1.0
|
|
Reference:
L.Moynie,
A.G.Hope,
C.D.Cukier,
G.Schneider,
D.Gray,
J.H.Naismith.
A High Throughput Fluorescent Assay For Drug Discovery Against Fatty Acid Enzymes of Bacteria To Be Published.
Page generated: Sun Jul 21 11:19:51 2024
|