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Chlorine in PDB 4ct3: Methylmercury Chloride Derivative Structure of the Lytic Chapk Domain of the Endolysin Lysk From Staphylococcus Aureus Bacteriophage K

Protein crystallography data

The structure of Methylmercury Chloride Derivative Structure of the Lytic Chapk Domain of the Endolysin Lysk From Staphylococcus Aureus Bacteriophage K, PDB code: 4ct3 was solved by M.Sanz-Gaitero, R.Keary, C.Garcia-Doval, A.Coffey, M.J.Van Raaij, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 61.50 / 1.69
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 39.020, 61.520, 72.800, 91.80, 98.73, 90.01
R / Rfree (%) 18.074 / 22.407

Other elements in 4ct3:

The structure of Methylmercury Chloride Derivative Structure of the Lytic Chapk Domain of the Endolysin Lysk From Staphylococcus Aureus Bacteriophage K also contains other interesting chemical elements:

Mercury (Hg) 20 atoms
Calcium (Ca) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Methylmercury Chloride Derivative Structure of the Lytic Chapk Domain of the Endolysin Lysk From Staphylococcus Aureus Bacteriophage K (pdb code 4ct3). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Methylmercury Chloride Derivative Structure of the Lytic Chapk Domain of the Endolysin Lysk From Staphylococcus Aureus Bacteriophage K, PDB code: 4ct3:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4ct3

Go back to Chlorine Binding Sites List in 4ct3
Chlorine binding site 1 out of 2 in the Methylmercury Chloride Derivative Structure of the Lytic Chapk Domain of the Endolysin Lysk From Staphylococcus Aureus Bacteriophage K


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Methylmercury Chloride Derivative Structure of the Lytic Chapk Domain of the Endolysin Lysk From Staphylococcus Aureus Bacteriophage K within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1167

b:33.4
occ:1.00
HG A:CMH1166 2.1 21.7 0.7
ND1 A:HIS117 2.6 10.2 1.0
SG A:CMH1166 3.0 14.9 1.0
O A:HOH2094 3.1 19.7 1.0
CB A:CMH1166 3.2 15.2 1.0
CM A:CMH1166 3.3 19.6 0.7
CE1 A:HIS117 3.4 12.3 1.0
CG A:HIS117 3.5 11.5 1.0
O A:GLY116 3.8 14.9 1.0
CB A:HIS117 3.8 12.2 1.0
CA A:HIS117 3.9 12.9 1.0
O A:HOH2171 4.2 20.7 1.0
O A:ASN136 4.3 14.8 1.0
O A:HOH2189 4.3 41.7 1.0
CA A:CMH1166 4.5 15.0 1.0
NE2 A:HIS117 4.6 12.8 1.0
N A:CMH1166 4.6 14.8 1.0
C A:GLY116 4.6 14.2 1.0
CD2 A:HIS117 4.6 12.8 1.0
O A:GLN135 4.7 13.9 1.0
N A:HIS117 4.7 12.8 1.0
N A:ILE118 4.8 12.4 1.0
C A:HIS117 4.9 12.4 1.0
C A:ASN136 5.0 17.1 1.0

Chlorine binding site 2 out of 2 in 4ct3

Go back to Chlorine Binding Sites List in 4ct3
Chlorine binding site 2 out of 2 in the Methylmercury Chloride Derivative Structure of the Lytic Chapk Domain of the Endolysin Lysk From Staphylococcus Aureus Bacteriophage K


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Methylmercury Chloride Derivative Structure of the Lytic Chapk Domain of the Endolysin Lysk From Staphylococcus Aureus Bacteriophage K within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl1167

b:26.6
occ:1.00
HG B:CMH1166 2.0 20.7 0.7
ND1 B:HIS117 2.6 11.1 1.0
SG B:CMH1166 2.9 16.4 1.0
O B:HOH2097 3.1 25.0 1.0
CB B:CMH1166 3.2 15.5 1.0
CM B:CMH1166 3.3 18.6 0.7
CE1 B:HIS117 3.5 12.5 1.0
CG B:HIS117 3.5 12.0 1.0
O B:GLY116 3.7 16.8 1.0
CB B:HIS117 3.8 13.2 1.0
CA B:HIS117 3.8 13.3 1.0
O B:HOH2162 4.2 20.5 1.0
O B:ASN136 4.4 14.9 1.0
CA B:CMH1166 4.5 15.1 1.0
C B:GLY116 4.5 15.4 1.0
N B:CMH1166 4.6 15.7 1.0
NE2 B:HIS117 4.6 12.6 1.0
N B:HIS117 4.6 13.8 1.0
CD2 B:HIS117 4.6 13.4 1.0
O B:GLN135 4.7 13.7 1.0
N B:ILE118 4.8 11.9 1.0
C B:HIS117 4.8 12.3 1.0

Reference:

M.Sanz-Gaitero, R.Keary, C.Garcia-Doval, A.Coffey, M.J.Van Raaij. Crystal Structure of the Lytic Chapk Domain of the Endolysin Lysk From Staphylococcus Aureus Bacteriophage K. Virol.J. V. 11 133 2014.
ISSN: ISSN 1743-422X
PubMed: 25064136
DOI: 10.1186/1743-422X-11-133
Page generated: Sun Jul 21 11:33:11 2024

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